Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1031 and DvMF_1032 are separated by 319 nucleotides DvMF_1032 and DvMF_1033 overlap by 4 nucleotides DvMF_1033 and DvMF_1034 are separated by 11 nucleotides
DvMF_1031: DvMF_1031 - twitching motility protein (RefSeq), at 1,251,284 to 1,252,585
_1031
DvMF_1032: DvMF_1032 - hypothetical protein (RefSeq), at 1,252,905 to 1,253,342
_1032
DvMF_1033: DvMF_1033 - hypothetical protein (RefSeq), at 1,253,339 to 1,253,809
_1033
DvMF_1034: DvMF_1034 - hypothetical protein (RefSeq), at 1,253,821 to 1,257,135
_1034
Position (kb)
1253
1254 Strain fitness (log2 ratio)
-1
0
1 at 1252.496 kb on + strand at 1252.505 kb on + strand at 1252.523 kb on + strand at 1252.531 kb on - strand at 1252.600 kb on - strand at 1252.723 kb on - strand at 1252.738 kb on + strand at 1252.775 kb on + strand at 1253.270 kb on - strand, within DvMF_1032 at 1253.272 kb on + strand, within DvMF_1032 at 1253.280 kb on - strand, within DvMF_1032 at 1253.287 kb on + strand, within DvMF_1032 at 1253.295 kb on - strand, within DvMF_1032 at 1253.564 kb on - strand, within DvMF_1033 at 1253.629 kb on + strand, within DvMF_1033 at 1253.842 kb on - strand at 1254.071 kb on + strand at 1254.356 kb on + strand, within DvMF_1034 at 1254.363 kb on + strand, within DvMF_1034 at 1254.371 kb on - strand, within DvMF_1034 at 1254.697 kb on + strand, within DvMF_1034 at 1254.794 kb on - strand, within DvMF_1034
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,252,496 + -0.8 1,252,505 + -0.4 1,252,523 + -0.6 1,252,531 - -0.4 1,252,600 - -0.0 1,252,723 - -0.8 1,252,738 + -0.4 1,252,775 + +0.6 1,253,270 - DvMF_1032 0.83 +0.2 1,253,272 + DvMF_1032 0.84 +0.2 1,253,280 - DvMF_1032 0.86 -0.0 1,253,287 + DvMF_1032 0.87 -0.3 1,253,295 - DvMF_1032 0.89 +0.0 1,253,564 - DvMF_1033 0.48 +0.1 1,253,629 + DvMF_1033 0.62 +0.1 1,253,842 - -0.1 1,254,071 + +0.3 1,254,356 + DvMF_1034 0.16 +0.1 1,254,363 + DvMF_1034 0.16 -0.1 1,254,371 - DvMF_1034 0.17 -0.0 1,254,697 + DvMF_1034 0.26 -0.1 1,254,794 - DvMF_1034 0.29 +0.3
Or see this region's nucleotide sequence