Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0967 and DvMF_0968 are separated by 576 nucleotides DvMF_0968 and rplM are separated by 506 nucleotides rplM and rpsI are separated by 22 nucleotides
DvMF_0967: DvMF_0967 - putative transcriptional regulator, XRE family (RefSeq), at 1,173,724 to 1,174,221
_0967
DvMF_0968: DvMF_0968 - hypothetical protein (RefSeq), at 1,174,798 to 1,176,069
_0968
DvMF_0969: rplM - 50S ribosomal protein L13 (RefSeq), at 1,176,576 to 1,177,010
rplM
DvMF_0970: rpsI - 30S ribosomal protein S9 (RefSeq), at 1,177,033 to 1,177,425
rpsI
Position (kb)
1174
1175
1176
1177 Strain fitness (log2 ratio)
-1
0
1 at 1174.067 kb on + strand, within DvMF_0967 at 1174.557 kb on - strand at 1174.592 kb on - strand at 1174.654 kb on - strand at 1174.798 kb on - strand at 1174.984 kb on - strand, within DvMF_0968 at 1175.148 kb on + strand, within DvMF_0968 at 1175.170 kb on - strand, within DvMF_0968 at 1175.272 kb on + strand, within DvMF_0968 at 1175.280 kb on - strand, within DvMF_0968 at 1175.381 kb on + strand, within DvMF_0968 at 1175.572 kb on - strand, within DvMF_0968 at 1175.657 kb on - strand, within DvMF_0968 at 1175.811 kb on - strand, within DvMF_0968 at 1175.958 kb on + strand at 1175.972 kb on + strand at 1176.193 kb on - strand at 1176.286 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,174,067 + DvMF_0967 0.69 -0.2 1,174,557 - -0.4 1,174,592 - +1.1 1,174,654 - -0.5 1,174,798 - -0.2 1,174,984 - DvMF_0968 0.15 +0.4 1,175,148 + DvMF_0968 0.28 +0.3 1,175,170 - DvMF_0968 0.29 +0.3 1,175,272 + DvMF_0968 0.37 +0.2 1,175,280 - DvMF_0968 0.38 -0.5 1,175,381 + DvMF_0968 0.46 +0.6 1,175,572 - DvMF_0968 0.61 +0.3 1,175,657 - DvMF_0968 0.68 +0.2 1,175,811 - DvMF_0968 0.80 +1.1 1,175,958 + +0.3 1,175,972 + +1.1 1,176,193 - -0.3 1,176,286 - -0.4
Or see this region's nucleotide sequence