Experiment: Cerium(III) chloride 0.000195313 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5521 and Pf6N2E2_5522 are separated by 142 nucleotides Pf6N2E2_5522 and Pf6N2E2_5523 are separated by 152 nucleotides
Pf6N2E2_5521 - 2-dehydropantoate 2-reductase (EC 1.1.1.169), at 6,340,919 to 6,341,836
_5521
Pf6N2E2_5522 - FIG001943: hypothetical protein YajQ, at 6,341,979 to 6,342,464
_5522
Pf6N2E2_5523 - Small-conductance mechanosensitive channel, at 6,342,617 to 6,343,459
_5523
Position (kb)
6341
6342
6343 Strain fitness (log2 ratio)
-2
-1
0
1 at 6341.037 kb on + strand, within Pf6N2E2_5521 at 6341.037 kb on + strand, within Pf6N2E2_5521 at 6341.037 kb on + strand, within Pf6N2E2_5521 at 6341.037 kb on + strand, within Pf6N2E2_5521 at 6341.037 kb on + strand, within Pf6N2E2_5521 at 6341.037 kb on + strand, within Pf6N2E2_5521 at 6341.037 kb on + strand, within Pf6N2E2_5521 at 6341.038 kb on - strand, within Pf6N2E2_5521 at 6341.038 kb on - strand, within Pf6N2E2_5521 at 6341.076 kb on + strand, within Pf6N2E2_5521 at 6341.076 kb on + strand, within Pf6N2E2_5521 at 6341.088 kb on + strand, within Pf6N2E2_5521 at 6341.088 kb on + strand, within Pf6N2E2_5521 at 6341.088 kb on + strand, within Pf6N2E2_5521 at 6341.132 kb on + strand, within Pf6N2E2_5521 at 6341.400 kb on + strand, within Pf6N2E2_5521 at 6341.417 kb on + strand, within Pf6N2E2_5521 at 6341.536 kb on + strand, within Pf6N2E2_5521 at 6341.536 kb on + strand, within Pf6N2E2_5521 at 6341.536 kb on + strand, within Pf6N2E2_5521 at 6341.536 kb on + strand, within Pf6N2E2_5521 at 6341.536 kb on + strand, within Pf6N2E2_5521 at 6341.537 kb on - strand, within Pf6N2E2_5521 at 6341.537 kb on - strand, within Pf6N2E2_5521 at 6341.537 kb on - strand, within Pf6N2E2_5521 at 6341.537 kb on - strand, within Pf6N2E2_5521 at 6341.537 kb on - strand, within Pf6N2E2_5521 at 6341.595 kb on + strand, within Pf6N2E2_5521 at 6341.612 kb on + strand, within Pf6N2E2_5521 at 6341.845 kb on + strand at 6341.901 kb on + strand at 6341.901 kb on + strand at 6341.901 kb on + strand at 6341.903 kb on + strand at 6341.903 kb on + strand at 6341.903 kb on + strand at 6341.903 kb on + strand at 6341.903 kb on + strand at 6341.903 kb on + strand at 6341.903 kb on + strand at 6341.904 kb on - strand at 6341.904 kb on - strand at 6341.904 kb on - strand at 6341.904 kb on - strand at 6341.904 kb on - strand at 6341.904 kb on - strand at 6341.918 kb on + strand at 6341.946 kb on + strand at 6341.947 kb on - strand at 6341.976 kb on + strand at 6341.976 kb on + strand at 6341.976 kb on + strand at 6341.976 kb on + strand at 6341.976 kb on + strand at 6341.976 kb on + strand at 6341.976 kb on + strand at 6341.976 kb on + strand at 6341.976 kb on + strand at 6341.977 kb on - strand at 6341.977 kb on - strand at 6341.977 kb on - strand at 6341.977 kb on - strand at 6341.977 kb on - strand at 6341.977 kb on - strand at 6341.977 kb on - strand at 6341.977 kb on - strand at 6341.977 kb on - strand at 6341.977 kb on - strand at 6341.977 kb on - strand at 6341.977 kb on - strand at 6341.977 kb on - strand at 6341.999 kb on - strand at 6342.228 kb on + strand, within Pf6N2E2_5522 at 6342.229 kb on - strand, within Pf6N2E2_5522 at 6342.311 kb on + strand, within Pf6N2E2_5522 at 6342.311 kb on + strand, within Pf6N2E2_5522 at 6342.312 kb on - strand, within Pf6N2E2_5522 at 6342.312 kb on - strand, within Pf6N2E2_5522 at 6342.449 kb on + strand at 6342.465 kb on + strand at 6342.466 kb on - strand at 6342.466 kb on - strand at 6342.466 kb on - strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.523 kb on + strand at 6342.524 kb on - strand at 6342.524 kb on - strand at 6342.524 kb on - strand at 6342.524 kb on - strand at 6342.524 kb on - strand at 6342.524 kb on - strand at 6342.525 kb on + strand at 6342.525 kb on + strand at 6342.526 kb on - strand at 6342.526 kb on - strand at 6342.590 kb on + strand at 6342.606 kb on - strand at 6342.606 kb on - strand at 6342.686 kb on + strand at 6342.844 kb on - strand, within Pf6N2E2_5523 at 6342.844 kb on - strand, within Pf6N2E2_5523 at 6342.844 kb on - strand, within Pf6N2E2_5523 at 6343.132 kb on + strand, within Pf6N2E2_5523 at 6343.187 kb on + strand, within Pf6N2E2_5523 at 6343.340 kb on + strand, within Pf6N2E2_5523 at 6343.341 kb on - strand, within Pf6N2E2_5523 at 6343.341 kb on - strand, within Pf6N2E2_5523 at 6343.405 kb on + strand at 6343.457 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cerium(III) chloride 0.000195313 M remove 6,341,037 + Pf6N2E2_5521 0.13 -0.4 6,341,037 + Pf6N2E2_5521 0.13 -0.4 6,341,037 + Pf6N2E2_5521 0.13 -0.1 6,341,037 + Pf6N2E2_5521 0.13 +0.4 6,341,037 + Pf6N2E2_5521 0.13 -0.1 6,341,037 + Pf6N2E2_5521 0.13 -0.1 6,341,037 + Pf6N2E2_5521 0.13 +0.4 6,341,038 - Pf6N2E2_5521 0.13 +0.7 6,341,038 - Pf6N2E2_5521 0.13 -0.5 6,341,076 + Pf6N2E2_5521 0.17 +0.6 6,341,076 + Pf6N2E2_5521 0.17 +0.6 6,341,088 + Pf6N2E2_5521 0.18 +0.3 6,341,088 + Pf6N2E2_5521 0.18 -0.1 6,341,088 + Pf6N2E2_5521 0.18 +0.1 6,341,132 + Pf6N2E2_5521 0.23 +0.2 6,341,400 + Pf6N2E2_5521 0.52 -0.5 6,341,417 + Pf6N2E2_5521 0.54 +0.6 6,341,536 + Pf6N2E2_5521 0.67 +0.4 6,341,536 + Pf6N2E2_5521 0.67 -0.4 6,341,536 + Pf6N2E2_5521 0.67 +0.7 6,341,536 + Pf6N2E2_5521 0.67 +1.6 6,341,536 + Pf6N2E2_5521 0.67 +0.4 6,341,537 - Pf6N2E2_5521 0.67 +0.8 6,341,537 - Pf6N2E2_5521 0.67 +0.7 6,341,537 - Pf6N2E2_5521 0.67 +0.4 6,341,537 - Pf6N2E2_5521 0.67 -0.2 6,341,537 - Pf6N2E2_5521 0.67 +0.9 6,341,595 + Pf6N2E2_5521 0.74 +0.4 6,341,612 + Pf6N2E2_5521 0.75 +0.7 6,341,845 + -0.4 6,341,901 + -0.7 6,341,901 + +0.0 6,341,901 + +0.7 6,341,903 + +1.2 6,341,903 + +0.6 6,341,903 + +0.1 6,341,903 + +0.8 6,341,903 + -1.7 6,341,903 + +0.0 6,341,903 + -0.5 6,341,904 - -0.4 6,341,904 - +0.2 6,341,904 - +0.6 6,341,904 - +1.6 6,341,904 - -0.4 6,341,904 - -0.4 6,341,918 + +0.8 6,341,946 + +1.0 6,341,947 - -1.3 6,341,976 + -0.6 6,341,976 + -0.1 6,341,976 + +0.1 6,341,976 + -0.7 6,341,976 + -0.4 6,341,976 + +0.1 6,341,976 + +0.1 6,341,976 + +0.4 6,341,976 + +0.1 6,341,977 - -0.6 6,341,977 - -0.6 6,341,977 - +1.1 6,341,977 - +0.4 6,341,977 - +1.0 6,341,977 - +0.8 6,341,977 - +0.4 6,341,977 - +0.2 6,341,977 - +0.7 6,341,977 - -0.4 6,341,977 - +1.4 6,341,977 - +0.2 6,341,977 - +0.3 6,341,999 - -0.1 6,342,228 + Pf6N2E2_5522 0.51 -0.2 6,342,229 - Pf6N2E2_5522 0.51 -2.1 6,342,311 + Pf6N2E2_5522 0.68 -0.1 6,342,311 + Pf6N2E2_5522 0.68 -0.4 6,342,312 - Pf6N2E2_5522 0.69 -0.8 6,342,312 - Pf6N2E2_5522 0.69 -1.9 6,342,449 + -0.4 6,342,465 + -0.7 6,342,466 - -0.4 6,342,466 - -0.0 6,342,466 - +0.6 6,342,523 + +0.0 6,342,523 + +0.6 6,342,523 + +0.1 6,342,523 + +0.9 6,342,523 + +0.1 6,342,523 + -0.1 6,342,523 + -0.2 6,342,523 + +0.5 6,342,523 + -2.0 6,342,523 + +0.5 6,342,523 + -0.1 6,342,523 + +1.3 6,342,523 + +1.3 6,342,523 + +0.7 6,342,523 + -1.4 6,342,523 + -0.9 6,342,523 + +1.4 6,342,523 + +0.5 6,342,523 + -0.1 6,342,523 + -0.2 6,342,524 - -1.1 6,342,524 - -0.2 6,342,524 - -1.3 6,342,524 - +0.7 6,342,524 - +0.4 6,342,524 - +0.2 6,342,525 + -1.0 6,342,525 + -0.7 6,342,526 - -0.8 6,342,526 - +0.1 6,342,590 + -0.1 6,342,606 - +0.3 6,342,606 - -0.2 6,342,686 + -0.0 6,342,844 - Pf6N2E2_5523 0.27 -0.2 6,342,844 - Pf6N2E2_5523 0.27 +0.6 6,342,844 - Pf6N2E2_5523 0.27 +0.7 6,343,132 + Pf6N2E2_5523 0.61 +0.5 6,343,187 + Pf6N2E2_5523 0.68 -0.4 6,343,340 + Pf6N2E2_5523 0.86 -0.5 6,343,341 - Pf6N2E2_5523 0.86 -0.7 6,343,341 - Pf6N2E2_5523 0.86 +0.2 6,343,405 + -0.6 6,343,457 + +0.3
Or see this region's nucleotide sequence