Experiment: Zinc chloride 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3382 and Pf6N2E2_3383 are separated by 167 nucleotides Pf6N2E2_3383 and Pf6N2E2_3384 overlap by 4 nucleotides Pf6N2E2_3384 and Pf6N2E2_3385 overlap by 4 nucleotides
Pf6N2E2_3382 - Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF, at 3,913,030 to 3,913,593
_3382
Pf6N2E2_3383 - Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF, at 3,913,761 to 3,914,489
_3383
Pf6N2E2_3384 - Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG, at 3,914,486 to 3,915,157
_3384
Pf6N2E2_3385 - Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing, at 3,915,154 to 3,917,964
_3385
Position (kb)
3914
3915
3916 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3913.510 kb on + strand, within Pf6N2E2_3382 at 3913.510 kb on + strand, within Pf6N2E2_3382 at 3913.510 kb on + strand, within Pf6N2E2_3382 at 3913.510 kb on + strand, within Pf6N2E2_3382 at 3913.510 kb on + strand, within Pf6N2E2_3382 at 3913.510 kb on + strand, within Pf6N2E2_3382 at 3913.510 kb on + strand, within Pf6N2E2_3382 at 3913.511 kb on - strand, within Pf6N2E2_3382 at 3913.511 kb on - strand, within Pf6N2E2_3382 at 3913.511 kb on - strand, within Pf6N2E2_3382 at 3913.578 kb on - strand at 3913.578 kb on - strand at 3913.620 kb on + strand at 3913.620 kb on + strand at 3913.620 kb on + strand at 3913.621 kb on - strand at 3913.621 kb on - strand at 3913.621 kb on - strand at 3913.857 kb on + strand, within Pf6N2E2_3383 at 3913.857 kb on + strand, within Pf6N2E2_3383 at 3913.858 kb on - strand, within Pf6N2E2_3383 at 3913.858 kb on - strand, within Pf6N2E2_3383 at 3913.858 kb on - strand, within Pf6N2E2_3383 at 3914.006 kb on + strand, within Pf6N2E2_3383 at 3914.006 kb on + strand, within Pf6N2E2_3383 at 3914.007 kb on - strand, within Pf6N2E2_3383 at 3914.007 kb on - strand, within Pf6N2E2_3383 at 3914.025 kb on + strand at 3914.025 kb on + strand, within Pf6N2E2_3383 at 3914.026 kb on - strand, within Pf6N2E2_3383 at 3914.026 kb on - strand, within Pf6N2E2_3383 at 3914.062 kb on - strand, within Pf6N2E2_3383 at 3914.073 kb on - strand, within Pf6N2E2_3383 at 3914.271 kb on + strand, within Pf6N2E2_3383 at 3914.272 kb on - strand, within Pf6N2E2_3383 at 3914.572 kb on - strand, within Pf6N2E2_3384 at 3914.572 kb on - strand, within Pf6N2E2_3384 at 3914.585 kb on + strand, within Pf6N2E2_3384 at 3915.002 kb on + strand, within Pf6N2E2_3384 at 3915.002 kb on + strand, within Pf6N2E2_3384 at 3915.002 kb on + strand, within Pf6N2E2_3384 at 3915.003 kb on - strand, within Pf6N2E2_3384 at 3915.003 kb on - strand, within Pf6N2E2_3384 at 3915.003 kb on - strand, within Pf6N2E2_3384 at 3915.176 kb on + strand at 3915.176 kb on + strand at 3915.176 kb on + strand at 3915.176 kb on + strand at 3915.177 kb on - strand at 3915.288 kb on - strand at 3915.426 kb on + strand at 3915.426 kb on + strand at 3915.628 kb on + strand, within Pf6N2E2_3385 at 3915.628 kb on + strand, within Pf6N2E2_3385 at 3915.628 kb on + strand, within Pf6N2E2_3385 at 3915.629 kb on - strand, within Pf6N2E2_3385 at 3915.629 kb on - strand, within Pf6N2E2_3385 at 3915.629 kb on - strand, within Pf6N2E2_3385 at 3915.629 kb on - strand, within Pf6N2E2_3385 at 3915.714 kb on + strand, within Pf6N2E2_3385 at 3915.715 kb on - strand, within Pf6N2E2_3385 at 3915.801 kb on + strand, within Pf6N2E2_3385 at 3915.801 kb on + strand, within Pf6N2E2_3385 at 3915.802 kb on - strand, within Pf6N2E2_3385 at 3915.802 kb on - strand, within Pf6N2E2_3385 at 3915.802 kb on - strand, within Pf6N2E2_3385 at 3915.802 kb on - strand, within Pf6N2E2_3385 at 3915.802 kb on - strand, within Pf6N2E2_3385 at 3915.802 kb on - strand, within Pf6N2E2_3385 at 3915.805 kb on + strand, within Pf6N2E2_3385 at 3915.806 kb on - strand, within Pf6N2E2_3385 at 3915.806 kb on - strand, within Pf6N2E2_3385 at 3915.806 kb on - strand, within Pf6N2E2_3385 at 3915.806 kb on - strand, within Pf6N2E2_3385 at 3915.806 kb on - strand, within Pf6N2E2_3385 at 3915.806 kb on - strand, within Pf6N2E2_3385 at 3915.870 kb on + strand, within Pf6N2E2_3385 at 3915.871 kb on - strand, within Pf6N2E2_3385 at 3915.931 kb on + strand, within Pf6N2E2_3385 at 3915.931 kb on + strand, within Pf6N2E2_3385 at 3915.931 kb on + strand, within Pf6N2E2_3385 at 3915.931 kb on + strand, within Pf6N2E2_3385 at 3915.931 kb on + strand, within Pf6N2E2_3385 at 3915.931 kb on + strand, within Pf6N2E2_3385 at 3915.932 kb on - strand, within Pf6N2E2_3385 at 3915.932 kb on - strand, within Pf6N2E2_3385 at 3915.932 kb on - strand, within Pf6N2E2_3385 at 3915.932 kb on - strand, within Pf6N2E2_3385 at 3915.932 kb on - strand, within Pf6N2E2_3385 at 3915.932 kb on - strand, within Pf6N2E2_3385 at 3915.977 kb on + strand, within Pf6N2E2_3385 at 3915.977 kb on + strand, within Pf6N2E2_3385
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc chloride 0.0000015625 M remove 3,913,510 + Pf6N2E2_3382 0.85 -1.7 3,913,510 + Pf6N2E2_3382 0.85 +0.2 3,913,510 + Pf6N2E2_3382 0.85 +0.1 3,913,510 + Pf6N2E2_3382 0.85 -1.2 3,913,510 + Pf6N2E2_3382 0.85 +0.5 3,913,510 + Pf6N2E2_3382 0.85 -1.2 3,913,510 + Pf6N2E2_3382 0.85 +2.3 3,913,511 - Pf6N2E2_3382 0.85 +1.3 3,913,511 - Pf6N2E2_3382 0.85 +0.4 3,913,511 - Pf6N2E2_3382 0.85 +1.1 3,913,578 - -0.6 3,913,578 - -1.6 3,913,620 + -1.0 3,913,620 + -1.7 3,913,620 + -0.2 3,913,621 - +0.8 3,913,621 - +0.8 3,913,621 - -2.2 3,913,857 + Pf6N2E2_3383 0.13 -0.3 3,913,857 + Pf6N2E2_3383 0.13 +0.8 3,913,858 - Pf6N2E2_3383 0.13 +0.0 3,913,858 - Pf6N2E2_3383 0.13 +0.2 3,913,858 - Pf6N2E2_3383 0.13 -0.6 3,914,006 + Pf6N2E2_3383 0.34 -3.0 3,914,006 + Pf6N2E2_3383 0.34 +1.7 3,914,007 - Pf6N2E2_3383 0.34 -1.4 3,914,007 - Pf6N2E2_3383 0.34 -1.8 3,914,025 + +1.4 3,914,025 + Pf6N2E2_3383 0.36 +0.9 3,914,026 - Pf6N2E2_3383 0.36 -3.0 3,914,026 - Pf6N2E2_3383 0.36 +0.4 3,914,062 - Pf6N2E2_3383 0.41 -1.4 3,914,073 - Pf6N2E2_3383 0.43 -1.4 3,914,271 + Pf6N2E2_3383 0.70 -0.2 3,914,272 - Pf6N2E2_3383 0.70 -0.2 3,914,572 - Pf6N2E2_3384 0.13 -0.2 3,914,572 - Pf6N2E2_3384 0.13 -2.5 3,914,585 + Pf6N2E2_3384 0.15 -0.8 3,915,002 + Pf6N2E2_3384 0.77 -0.8 3,915,002 + Pf6N2E2_3384 0.77 -1.9 3,915,002 + Pf6N2E2_3384 0.77 -1.4 3,915,003 - Pf6N2E2_3384 0.77 -1.2 3,915,003 - Pf6N2E2_3384 0.77 -1.9 3,915,003 - Pf6N2E2_3384 0.77 -1.2 3,915,176 + +0.1 3,915,176 + +0.1 3,915,176 + -0.1 3,915,176 + +0.2 3,915,177 - +1.9 3,915,288 - +2.0 3,915,426 + +0.6 3,915,426 + -1.3 3,915,628 + Pf6N2E2_3385 0.17 -0.6 3,915,628 + Pf6N2E2_3385 0.17 -2.2 3,915,628 + Pf6N2E2_3385 0.17 -0.7 3,915,629 - Pf6N2E2_3385 0.17 -2.3 3,915,629 - Pf6N2E2_3385 0.17 -0.0 3,915,629 - Pf6N2E2_3385 0.17 -1.4 3,915,629 - Pf6N2E2_3385 0.17 -0.6 3,915,714 + Pf6N2E2_3385 0.20 -1.1 3,915,715 - Pf6N2E2_3385 0.20 +1.3 3,915,801 + Pf6N2E2_3385 0.23 -0.6 3,915,801 + Pf6N2E2_3385 0.23 +2.5 3,915,802 - Pf6N2E2_3385 0.23 +0.2 3,915,802 - Pf6N2E2_3385 0.23 -0.8 3,915,802 - Pf6N2E2_3385 0.23 +2.3 3,915,802 - Pf6N2E2_3385 0.23 +0.9 3,915,802 - Pf6N2E2_3385 0.23 +0.3 3,915,802 - Pf6N2E2_3385 0.23 -0.4 3,915,805 + Pf6N2E2_3385 0.23 +0.5 3,915,806 - Pf6N2E2_3385 0.23 +1.4 3,915,806 - Pf6N2E2_3385 0.23 -2.7 3,915,806 - Pf6N2E2_3385 0.23 +1.7 3,915,806 - Pf6N2E2_3385 0.23 -1.7 3,915,806 - Pf6N2E2_3385 0.23 -2.7 3,915,806 - Pf6N2E2_3385 0.23 +1.9 3,915,870 + Pf6N2E2_3385 0.25 +2.2 3,915,871 - Pf6N2E2_3385 0.26 -1.8 3,915,931 + Pf6N2E2_3385 0.28 +3.2 3,915,931 + Pf6N2E2_3385 0.28 +1.3 3,915,931 + Pf6N2E2_3385 0.28 +0.1 3,915,931 + Pf6N2E2_3385 0.28 +2.1 3,915,931 + Pf6N2E2_3385 0.28 +2.4 3,915,931 + Pf6N2E2_3385 0.28 +0.3 3,915,932 - Pf6N2E2_3385 0.28 +1.1 3,915,932 - Pf6N2E2_3385 0.28 +1.4 3,915,932 - Pf6N2E2_3385 0.28 -2.7 3,915,932 - Pf6N2E2_3385 0.28 +3.4 3,915,932 - Pf6N2E2_3385 0.28 +2.1 3,915,932 - Pf6N2E2_3385 0.28 -1.1 3,915,977 + Pf6N2E2_3385 0.29 -0.9 3,915,977 + Pf6N2E2_3385 0.29 -0.3
Or see this region's nucleotide sequence