Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2526

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
2,606,556	+	tig	Synpcc7942_2524	0.90	-2.6
2,606,615	+				-0.4
2,606,659	+				-0.1
2,606,723	-				+1.6
2,606,733	-				+0.1
2,606,743	-				-1.2
2,606,743	-				-0.8
2,606,772	+				-0.4
2,606,775	+				+0.3
2,606,777	+				+0.1
2,606,780	-				+0.8
2,606,780	-				+1.1
2,606,780	-				+0.1
2,606,780	-				+0.9
2,606,900	+	clpPII	Synpcc7942_2525	0.16	-3.2
2,606,953	+	clpPII	Synpcc7942_2525	0.23	-1.4
2,606,961	-	clpPII	Synpcc7942_2525	0.24	-1.2
2,607,001	-	clpPII	Synpcc7942_2525	0.30	-1.4
2,607,006	-	clpPII	Synpcc7942_2525	0.30	-2.1
2,607,078	+	clpPII	Synpcc7942_2525	0.40	-3.6
2,607,086	-	clpPII	Synpcc7942_2525	0.41	-2.0
2,607,086	-	clpPII	Synpcc7942_2525	0.41	-2.3
2,607,086	-	clpPII	Synpcc7942_2525	0.41	-2.3
2,607,196	-	clpPII	Synpcc7942_2525	0.56	-0.3
2,607,212	-	clpPII	Synpcc7942_2525	0.59	-1.8
2,607,276	-	clpPII	Synpcc7942_2525	0.67	-0.4
2,607,276	-	clpPII	Synpcc7942_2525	0.67	-2.5
2,607,280	+	clpPII	Synpcc7942_2525	0.68	-1.3
2,607,288	-	clpPII	Synpcc7942_2525	0.69	-1.9
2,607,289	-	clpPII	Synpcc7942_2525	0.69	-0.6
2,607,371	-	clpPII	Synpcc7942_2525	0.80	-1.7
2,607,464	+				-0.3
2,607,468	-				-1.1
2,607,475	+				-0.9
2,607,476	+				+1.1
2,607,480	+				-1.3
2,607,483	-				-0.1
2,607,543	-				-1.5
2,607,621	-				-2.2
2,607,773	+	clpX	Synpcc7942_2526	0.18	-1.3
2,607,775	-	clpX	Synpcc7942_2526	0.18	-1.6
2,607,775	-	clpX	Synpcc7942_2526	0.18	-2.3
2,607,952	+	clpX	Synpcc7942_2526	0.31	-2.8
2,608,231	-	clpX	Synpcc7942_2526	0.52	-1.2
2,608,267	-	clpX	Synpcc7942_2526	0.55	-1.9
2,608,418	+	clpX	Synpcc7942_2526	0.66	-1.8
2,608,488	+	clpX	Synpcc7942_2526	0.71	-2.8
2,608,540	+	clpX	Synpcc7942_2526	0.75	-2.5
2,608,610	-	clpX	Synpcc7942_2526	0.80	-1.9
2,608,637	+	clpX	Synpcc7942_2526	0.82	-4.0
2,608,829	-				-2.7
2,608,893	+				-0.2
2,608,893	+				+1.2
2,608,900	+				+1.1
2,608,901	-				+0.0
2,608,901	-				+0.7
2,608,901	-				-0.1
2,608,951	+				+0.3
2,609,018	-		Synpcc7942_2527	0.17	+0.4
2,609,028	+		Synpcc7942_2527	0.18	+0.0
2,609,036	-		Synpcc7942_2527	0.19	-0.8
2,609,058	-		Synpcc7942_2527	0.22	+0.3
2,609,079	+		Synpcc7942_2527	0.24	-1.0
2,609,084	+		Synpcc7942_2527	0.25	-0.6
2,609,087	-		Synpcc7942_2527	0.25	+0.4
2,609,092	-		Synpcc7942_2527	0.26	+0.5
2,609,092	-		Synpcc7942_2527	0.26	+0.6
2,609,168	+		Synpcc7942_2527	0.35	+0.3
2,609,176	-		Synpcc7942_2527	0.36	-0.9
2,609,176	-		Synpcc7942_2527	0.36	-0.1
2,609,177	-		Synpcc7942_2527	0.36	-0.6
2,609,183	-		Synpcc7942_2527	0.37	-1.0
2,609,198	+		Synpcc7942_2527	0.38	-0.7
2,609,212	-		Synpcc7942_2527	0.40	-0.1
2,609,234	-		Synpcc7942_2527	0.43	-0.6
2,609,265	+		Synpcc7942_2527	0.46	-0.6
2,609,273	-		Synpcc7942_2527	0.47	-0.4
2,609,299	+		Synpcc7942_2527	0.50	+0.1
2,609,397	-		Synpcc7942_2527	0.62	-0.5
2,609,398	+		Synpcc7942_2527	0.62	-0.7
2,609,453	-		Synpcc7942_2527	0.69	-0.1
2,609,457	+		Synpcc7942_2527	0.69	-1.4
2,609,482	+		Synpcc7942_2527	0.72	+0.0
2,609,501	+		Synpcc7942_2527	0.74	+1.7
2,609,501	+		Synpcc7942_2527	0.74	-0.3
2,609,509	-		Synpcc7942_2527	0.75	-0.6
2,609,527	-		Synpcc7942_2527	0.77	-0.8
2,609,537	-		Synpcc7942_2527	0.79	-1.3
2,609,553	-		Synpcc7942_2527	0.80	-1.0
2,609,567	+		Synpcc7942_2527	0.82	+0.8
2,609,572	+		Synpcc7942_2527	0.83	-0.3
2,609,589	+		Synpcc7942_2527	0.85	+0.1
2,609,590	+		Synpcc7942_2527	0.85	+0.5
2,609,590	-		Synpcc7942_2527	0.85	+1.0
2,609,628	+		Synpcc7942_2527	0.89	-2.2
2,609,628	+		Synpcc7942_2527	0.89	+0.3
2,609,712	-				-1.0
2,609,731	+				-1.6
2,609,736	+				+0.0
2,609,747	-				-1.5
2,609,781	-				-0.5
2,609,783	+				-0.3
2,609,783	+				+0.1
2,609,783	+				+0.0
2,609,785	+				+0.1
2,609,791	-				+0.5
2,609,791	-				+0.7
2,609,823	+		Synpcc7942_2528	0.12	+0.6
2,609,830	-		Synpcc7942_2528	0.13	-0.7
2,609,830	-		Synpcc7942_2528	0.13	+0.1