Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1652

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
1,720,917	-				+0.1
1,720,926	+				+0.4
1,720,926	+				+1.7
1,720,941	+				-0.1
1,720,941	+				-0.4
1,720,941	+				-2.0
1,720,941	+				-0.2
1,720,941	+				-0.3
1,720,942	-				+0.8
1,720,946	+				+0.9
1,720,949	-				-1.1
1,720,949	-				+0.9
1,720,949	-				-0.1
1,720,949	-				-1.2
1,720,949	-				+0.4
1,720,949	-				-0.8
1,720,950	-				+0.8
1,721,019	-				-2.1
1,721,042	+				+0.4
1,721,042	+				+0.0
1,721,050	-				-0.3
1,721,062	-				-0.8
1,721,796	-				-0.6
1,721,919	-				-2.1
1,721,937	+				-1.7
1,721,999	+		Synpcc7942_1652	0.13	-1.2
1,721,999	-		Synpcc7942_1652	0.13	-2.5
1,722,001	-		Synpcc7942_1652	0.13	-3.3
1,722,013	+		Synpcc7942_1652	0.13	-1.6
1,722,013	+		Synpcc7942_1652	0.13	+0.2
1,722,020	+		Synpcc7942_1652	0.14	-0.3
1,722,022	+		Synpcc7942_1652	0.14	-0.4
1,722,027	+		Synpcc7942_1652	0.14	-2.5
1,722,035	-		Synpcc7942_1652	0.15	+1.8
1,722,037	+		Synpcc7942_1652	0.15	-0.5
1,722,037	+		Synpcc7942_1652	0.15	-1.6
1,722,037	+		Synpcc7942_1652	0.15	-1.1
1,722,037	+		Synpcc7942_1652	0.15	-3.1
1,722,037	+		Synpcc7942_1652	0.15	-1.6
1,722,037	+		Synpcc7942_1652	0.15	-2.3
1,722,039	+		Synpcc7942_1652	0.15	+0.9
1,722,039	+		Synpcc7942_1652	0.15	-2.0
1,722,045	-		Synpcc7942_1652	0.15	-2.5
1,722,047	-		Synpcc7942_1652	0.16	-1.1
1,722,047	-		Synpcc7942_1652	0.16	-0.2
1,722,047	-		Synpcc7942_1652	0.16	-1.7
1,722,052	-		Synpcc7942_1652	0.16	-0.6
1,722,073	+		Synpcc7942_1652	0.17	-0.7
1,722,090	-		Synpcc7942_1652	0.18	-1.6
1,722,101	-		Synpcc7942_1652	0.19	-1.5
1,722,120	+		Synpcc7942_1652	0.20	-1.8
1,722,133	+		Synpcc7942_1652	0.21	-1.6
1,722,139	-		Synpcc7942_1652	0.21	-2.1
1,722,144	+		Synpcc7942_1652	0.21	-1.4
1,722,144	+		Synpcc7942_1652	0.21	-2.2
1,722,152	-		Synpcc7942_1652	0.22	-1.8
1,722,212	-		Synpcc7942_1652	0.26	-0.1
1,722,215	+		Synpcc7942_1652	0.26	-2.7
1,722,228	-		Synpcc7942_1652	0.27	-2.1
1,722,242	+		Synpcc7942_1652	0.27	-2.0
1,722,248	-		Synpcc7942_1652	0.28	-1.6
1,722,297	+		Synpcc7942_1652	0.31	-2.4
1,722,304	+		Synpcc7942_1652	0.31	-0.9
1,722,312	-		Synpcc7942_1652	0.32	-1.7
1,722,373	-		Synpcc7942_1652	0.35	-1.4
1,722,373	-		Synpcc7942_1652	0.35	-0.9
1,722,404	+		Synpcc7942_1652	0.37	-2.1
1,722,409	+		Synpcc7942_1652	0.38	-1.4
1,722,420	+		Synpcc7942_1652	0.38	-1.2
1,722,454	+		Synpcc7942_1652	0.40	-1.2
1,722,461	+		Synpcc7942_1652	0.41	-2.4
1,722,469	-		Synpcc7942_1652	0.41	-1.1
1,722,480	-		Synpcc7942_1652	0.42	-1.8
1,722,499	-		Synpcc7942_1652	0.43	+0.6
1,722,499	-		Synpcc7942_1652	0.43	-1.6
1,722,501	+		Synpcc7942_1652	0.43	-1.5
1,722,501	+		Synpcc7942_1652	0.43	-1.0
1,722,509	-		Synpcc7942_1652	0.44	-0.1
1,722,509	-		Synpcc7942_1652	0.44	-1.7
1,722,509	-		Synpcc7942_1652	0.44	-1.7
1,722,509	-		Synpcc7942_1652	0.44	-2.0
1,722,509	-		Synpcc7942_1652	0.44	-0.7
1,722,509	-		Synpcc7942_1652	0.44	-1.7
1,722,509	-		Synpcc7942_1652	0.44	+0.2
1,722,511	-		Synpcc7942_1652	0.44	-1.9
1,722,514	-		Synpcc7942_1652	0.44	-1.5
1,722,542	+		Synpcc7942_1652	0.46	-2.0
1,722,561	+		Synpcc7942_1652	0.47	-1.8
1,722,620	+		Synpcc7942_1652	0.50	-1.6
1,722,620	+		Synpcc7942_1652	0.50	-1.7
1,722,628	-		Synpcc7942_1652	0.51	-0.4
1,722,673	-		Synpcc7942_1652	0.54	-1.7
1,722,675	+		Synpcc7942_1652	0.54	-2.1
1,722,675	+		Synpcc7942_1652	0.54	-1.4
1,722,675	+		Synpcc7942_1652	0.54	+0.3
1,722,675	+		Synpcc7942_1652	0.54	-1.8
1,722,675	+		Synpcc7942_1652	0.54	-0.8
1,722,675	+		Synpcc7942_1652	0.54	-3.0
1,722,675	+		Synpcc7942_1652	0.54	-1.5
1,722,675	+		Synpcc7942_1652	0.54	-1.2
1,722,675	+		Synpcc7942_1652	0.54	-2.7
1,722,678	-		Synpcc7942_1652	0.54	-1.1
1,722,683	-		Synpcc7942_1652	0.54	-1.7
1,722,683	-		Synpcc7942_1652	0.54	-1.5
1,722,683	-		Synpcc7942_1652	0.54	-1.4
1,722,683	-		Synpcc7942_1652	0.54	-1.8
1,722,683	-		Synpcc7942_1652	0.54	-1.2
1,722,683	-		Synpcc7942_1652	0.54	-1.1
1,722,683	-		Synpcc7942_1652	0.54	-1.7
1,722,692	-		Synpcc7942_1652	0.55	-4.1
1,722,717	-		Synpcc7942_1652	0.56	-1.5
1,722,719	-		Synpcc7942_1652	0.56	-1.0
1,722,722	+		Synpcc7942_1652	0.57	-0.9
1,722,725	-		Synpcc7942_1652	0.57	-1.8
1,722,729	+		Synpcc7942_1652	0.57	-0.6
1,722,777	-		Synpcc7942_1652	0.60	-2.2
1,722,795	-		Synpcc7942_1652	0.61	-0.5
1,722,797	+		Synpcc7942_1652	0.61	-0.6
1,722,807	+		Synpcc7942_1652	0.62	-1.3
1,722,810	-		Synpcc7942_1652	0.62	-2.5
1,722,812	+		Synpcc7942_1652	0.62	-0.9
1,722,861	+		Synpcc7942_1652	0.65	-1.8
1,722,864	-		Synpcc7942_1652	0.65	-1.3
1,722,908	-		Synpcc7942_1652	0.68	-1.6
1,722,908	-		Synpcc7942_1652	0.68	-1.6
1,722,908	-		Synpcc7942_1652	0.68	-2.4
1,722,916	-		Synpcc7942_1652	0.68	-1.0
1,722,960	+		Synpcc7942_1652	0.71	-0.1
1,722,982	+		Synpcc7942_1652	0.73	-0.9
1,723,011	+		Synpcc7942_1652	0.74	-1.6
1,723,018	-		Synpcc7942_1652	0.75	-1.7
1,723,019	-		Synpcc7942_1652	0.75	-1.6
1,723,116	+		Synpcc7942_1652	0.81	-2.3
1,723,200	+		Synpcc7942_1652	0.86	-1.4
1,723,252	-		Synpcc7942_1652	0.89	-1.2
1,723,257	+		Synpcc7942_1652	0.89	-2.1
1,723,267	+		Synpcc7942_1652	0.90	-0.9
1,723,283	-				-0.2
1,723,304	+				-0.5
1,723,312	-				-1.8
1,723,328	+				-2.6
1,723,334	-				-1.9
1,723,335	-				-1.8
1,723,336	-				-0.7
1,723,336	-				+3.0
1,723,338	+				-1.8
1,723,338	+				-1.5
1,723,338	+				-1.2
1,723,343	+				-1.8
1,723,361	-				-2.5
1,723,361	-				-0.9
1,723,364	+				-1.4
1,723,454	+				-0.2
1,723,465	+				-0.2
1,723,466	+				+0.2
1,723,466	+				-0.0
1,723,467	-				+0.9
1,723,474	-				-1.3
1,723,478	+				+0.4
1,723,494	+				-0.1
1,723,515	+				-0.2
1,723,544	-				+0.5
1,723,567	+				+0.3
1,723,568	+				-0.5
1,723,583	+				+0.5
1,723,583	+				+0.4
1,723,591	-				+0.6
1,723,593	+				+0.8
1,723,593	+				-0.9
1,723,593	+				-0.0
1,723,601	-				+0.3
1,723,601	-				+4.4
1,723,857	+	gldA	Synpcc7942_1653	0.26	+0.5
1,723,870	+	gldA	Synpcc7942_1653	0.28	-0.2
1,723,878	-	gldA	Synpcc7942_1653	0.28	+0.4
1,723,878	-	gldA	Synpcc7942_1653	0.28	+0.7
1,723,891	+	gldA	Synpcc7942_1653	0.29	-0.5
1,723,902	-	gldA	Synpcc7942_1653	0.30	+0.4
1,723,910	+	gldA	Synpcc7942_1653	0.31	-0.2
1,723,915	+	gldA	Synpcc7942_1653	0.31	+1.1
1,723,920	+	gldA	Synpcc7942_1653	0.32	-0.2
1,723,920	+	gldA	Synpcc7942_1653	0.32	+1.0
1,723,928	+	gldA	Synpcc7942_1653	0.32	+0.5
1,723,944	-	gldA	Synpcc7942_1653	0.34	-0.0
1,723,974	+	gldA	Synpcc7942_1653	0.36	+0.2
1,723,983	-	gldA	Synpcc7942_1653	0.37	-1.1
1,724,048	-	gldA	Synpcc7942_1653	0.42	-0.2
1,724,048	-	gldA	Synpcc7942_1653	0.42	-0.7
1,724,060	-	gldA	Synpcc7942_1653	0.43	+1.7
1,724,061	-	gldA	Synpcc7942_1653	0.44	+0.5
1,724,092	+	gldA	Synpcc7942_1653	0.46	-0.2
1,724,106	-	gldA	Synpcc7942_1653	0.47	+0.8
1,724,128	+	gldA	Synpcc7942_1653	0.49	-0.1
1,724,136	+	gldA	Synpcc7942_1653	0.50	-0.9
1,724,149	-	gldA	Synpcc7942_1653	0.51	+0.5
1,724,164	-	gldA	Synpcc7942_1653	0.52	-0.7
1,724,169	-	gldA	Synpcc7942_1653	0.53	-0.4
1,724,239	-	gldA	Synpcc7942_1653	0.58	+0.1
1,724,245	+	gldA	Synpcc7942_1653	0.59	+0.4
1,724,276	+	gldA	Synpcc7942_1653	0.61	+0.5
1,724,281	-	gldA	Synpcc7942_1653	0.62	-0.3
1,724,283	+	gldA	Synpcc7942_1653	0.62	-0.2
1,724,286	-	gldA	Synpcc7942_1653	0.62	-0.2
1,724,291	-	gldA	Synpcc7942_1653	0.63	+0.5
1,724,297	+	gldA	Synpcc7942_1653	0.63	+0.1
1,724,297	+	gldA	Synpcc7942_1653	0.63	+0.7
1,724,297	+	gldA	Synpcc7942_1653	0.63	-1.0
1,724,300	-	gldA	Synpcc7942_1653	0.63	-1.5
1,724,300	-	gldA	Synpcc7942_1653	0.63	-0.3
1,724,300	-	gldA	Synpcc7942_1653	0.63	+0.3
1,724,300	-	gldA	Synpcc7942_1653	0.63	+0.3
1,724,305	-	gldA	Synpcc7942_1653	0.64	-0.2
1,724,305	-	gldA	Synpcc7942_1653	0.64	-0.2
1,724,350	-	gldA	Synpcc7942_1653	0.68	+1.1
1,724,424	-	gldA	Synpcc7942_1653	0.74	+0.4