Experiment: Cesium chloride 0.00078125 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2291 and Pf6N2E2_2292 are separated by 189 nucleotides Pf6N2E2_2292 and Pf6N2E2_2293 are separated by 133 nucleotides Pf6N2E2_2293 and Pf6N2E2_2294 are separated by 213 nucleotides
Pf6N2E2_2291 - FIG00953628: hypothetical protein, at 2,711,883 to 2,712,233
_2291
Pf6N2E2_2292 - Universal stress protein family COG0589, at 2,712,423 to 2,712,863
_2292
Pf6N2E2_2293 - COG0488: ATPase components of ABC transporters with duplicated ATPase domains, at 2,712,997 to 2,714,907
_2293
Pf6N2E2_2294 - Soluble lytic murein transglycosylase precursor (EC 3.2.1.-), at 2,715,121 to 2,717,049
_2294
Position (kb)
2712
2713
2714
2715 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2712.086 kb on - strand, within Pf6N2E2_2291 at 2712.279 kb on + strand at 2712.280 kb on - strand at 2712.321 kb on - strand at 2712.326 kb on + strand at 2712.388 kb on + strand at 2712.388 kb on + strand at 2712.388 kb on + strand at 2712.388 kb on + strand at 2712.388 kb on + strand at 2712.388 kb on + strand at 2712.388 kb on + strand at 2712.388 kb on + strand at 2712.388 kb on + strand at 2712.388 kb on + strand at 2712.389 kb on - strand at 2712.389 kb on - strand at 2712.389 kb on - strand at 2712.389 kb on - strand at 2712.389 kb on - strand at 2712.389 kb on - strand at 2712.389 kb on - strand at 2712.392 kb on + strand at 2712.393 kb on - strand at 2712.426 kb on + strand at 2712.426 kb on + strand at 2712.426 kb on + strand at 2712.426 kb on + strand at 2712.426 kb on + strand at 2712.427 kb on - strand at 2712.427 kb on - strand at 2712.427 kb on - strand at 2712.429 kb on + strand at 2712.429 kb on + strand at 2712.429 kb on + strand at 2712.429 kb on + strand at 2712.429 kb on + strand at 2712.430 kb on - strand at 2712.430 kb on - strand at 2712.430 kb on - strand at 2712.430 kb on - strand at 2712.430 kb on - strand at 2712.430 kb on - strand at 2712.537 kb on - strand, within Pf6N2E2_2292 at 2712.652 kb on - strand, within Pf6N2E2_2292 at 2712.652 kb on - strand, within Pf6N2E2_2292 at 2712.652 kb on - strand, within Pf6N2E2_2292 at 2712.687 kb on + strand, within Pf6N2E2_2292 at 2712.688 kb on - strand, within Pf6N2E2_2292 at 2713.100 kb on + strand at 2713.101 kb on - strand at 2713.101 kb on - strand at 2713.130 kb on - strand at 2713.199 kb on + strand, within Pf6N2E2_2293 at 2713.199 kb on + strand, within Pf6N2E2_2293 at 2713.200 kb on - strand, within Pf6N2E2_2293 at 2713.200 kb on - strand, within Pf6N2E2_2293 at 2713.200 kb on - strand, within Pf6N2E2_2293 at 2713.200 kb on - strand, within Pf6N2E2_2293 at 2713.647 kb on - strand, within Pf6N2E2_2293 at 2713.757 kb on + strand, within Pf6N2E2_2293 at 2713.892 kb on - strand, within Pf6N2E2_2293 at 2714.188 kb on + strand, within Pf6N2E2_2293 at 2714.189 kb on - strand, within Pf6N2E2_2293 at 2714.204 kb on + strand, within Pf6N2E2_2293 at 2714.204 kb on + strand, within Pf6N2E2_2293 at 2714.660 kb on - strand, within Pf6N2E2_2293 at 2714.863 kb on - strand at 2714.992 kb on - strand at 2715.056 kb on - strand at 2715.060 kb on + strand at 2715.061 kb on - strand at 2715.070 kb on + strand at 2715.106 kb on - strand at 2715.106 kb on - strand at 2715.146 kb on + strand at 2715.147 kb on - strand at 2715.162 kb on - strand at 2715.198 kb on + strand at 2715.217 kb on + strand at 2715.221 kb on - strand at 2715.221 kb on - strand at 2715.265 kb on + strand at 2715.265 kb on + strand at 2715.310 kb on + strand at 2715.310 kb on + strand at 2715.310 kb on + strand at 2715.319 kb on + strand, within Pf6N2E2_2294 at 2715.472 kb on + strand, within Pf6N2E2_2294 at 2715.472 kb on + strand, within Pf6N2E2_2294 at 2715.472 kb on + strand, within Pf6N2E2_2294 at 2715.473 kb on - strand, within Pf6N2E2_2294 at 2715.473 kb on - strand, within Pf6N2E2_2294 at 2715.473 kb on - strand, within Pf6N2E2_2294 at 2715.473 kb on - strand, within Pf6N2E2_2294 at 2715.473 kb on - strand, within Pf6N2E2_2294 at 2715.473 kb on - strand, within Pf6N2E2_2294 at 2715.476 kb on - strand, within Pf6N2E2_2294 at 2715.476 kb on - strand, within Pf6N2E2_2294 at 2715.556 kb on + strand, within Pf6N2E2_2294 at 2715.557 kb on - strand, within Pf6N2E2_2294 at 2715.626 kb on + strand, within Pf6N2E2_2294 at 2715.627 kb on - strand, within Pf6N2E2_2294 at 2715.700 kb on + strand, within Pf6N2E2_2294 at 2715.700 kb on + strand, within Pf6N2E2_2294 at 2715.701 kb on - strand, within Pf6N2E2_2294
Per-strain Table
Position Strand Gene LocusTag Fraction Cesium chloride 0.00078125 M remove 2,712,086 - Pf6N2E2_2291 0.58 -0.7 2,712,279 + +1.2 2,712,280 - -0.2 2,712,321 - -0.7 2,712,326 + -0.9 2,712,388 + -0.5 2,712,388 + -0.3 2,712,388 + +0.4 2,712,388 + +0.9 2,712,388 + +0.3 2,712,388 + +0.1 2,712,388 + +0.0 2,712,388 + -1.1 2,712,388 + +0.3 2,712,388 + -0.9 2,712,389 - -0.7 2,712,389 - -0.2 2,712,389 - -0.3 2,712,389 - -0.1 2,712,389 - -1.4 2,712,389 - -0.5 2,712,389 - -1.2 2,712,392 + -2.0 2,712,393 - -1.2 2,712,426 + +0.5 2,712,426 + -1.8 2,712,426 + +0.0 2,712,426 + +0.9 2,712,426 + +0.0 2,712,427 - -0.1 2,712,427 - -1.8 2,712,427 - +0.5 2,712,429 + -0.4 2,712,429 + +0.0 2,712,429 + -0.2 2,712,429 + +0.2 2,712,429 + +0.7 2,712,430 - +0.2 2,712,430 - -1.1 2,712,430 - +0.2 2,712,430 - -0.7 2,712,430 - +0.7 2,712,430 - +0.4 2,712,537 - Pf6N2E2_2292 0.26 +0.1 2,712,652 - Pf6N2E2_2292 0.52 +0.0 2,712,652 - Pf6N2E2_2292 0.52 -0.1 2,712,652 - Pf6N2E2_2292 0.52 +0.7 2,712,687 + Pf6N2E2_2292 0.60 -0.1 2,712,688 - Pf6N2E2_2292 0.60 +0.2 2,713,100 + -2.7 2,713,101 - -1.0 2,713,101 - -0.6 2,713,130 - +0.1 2,713,199 + Pf6N2E2_2293 0.11 -0.1 2,713,199 + Pf6N2E2_2293 0.11 -0.6 2,713,200 - Pf6N2E2_2293 0.11 -0.3 2,713,200 - Pf6N2E2_2293 0.11 -0.3 2,713,200 - Pf6N2E2_2293 0.11 -0.2 2,713,200 - Pf6N2E2_2293 0.11 +0.1 2,713,647 - Pf6N2E2_2293 0.34 -1.6 2,713,757 + Pf6N2E2_2293 0.40 +0.3 2,713,892 - Pf6N2E2_2293 0.47 -0.5 2,714,188 + Pf6N2E2_2293 0.62 -1.7 2,714,189 - Pf6N2E2_2293 0.62 -0.7 2,714,204 + Pf6N2E2_2293 0.63 -1.2 2,714,204 + Pf6N2E2_2293 0.63 -0.6 2,714,660 - Pf6N2E2_2293 0.87 -3.1 2,714,863 - -1.0 2,714,992 - +0.4 2,715,056 - +0.3 2,715,060 + -1.4 2,715,061 - -0.2 2,715,070 + +2.2 2,715,106 - +0.3 2,715,106 - +0.0 2,715,146 + +0.6 2,715,147 - -2.3 2,715,162 - -0.3 2,715,198 + -0.8 2,715,217 + -1.3 2,715,221 - -0.3 2,715,221 - -0.0 2,715,265 + +0.5 2,715,265 + -0.1 2,715,310 + +0.2 2,715,310 + +0.8 2,715,310 + +0.4 2,715,319 + Pf6N2E2_2294 0.10 +0.4 2,715,472 + Pf6N2E2_2294 0.18 +0.2 2,715,472 + Pf6N2E2_2294 0.18 -0.2 2,715,472 + Pf6N2E2_2294 0.18 +3.4 2,715,473 - Pf6N2E2_2294 0.18 +0.9 2,715,473 - Pf6N2E2_2294 0.18 +1.7 2,715,473 - Pf6N2E2_2294 0.18 +1.5 2,715,473 - Pf6N2E2_2294 0.18 +0.1 2,715,473 - Pf6N2E2_2294 0.18 +0.5 2,715,473 - Pf6N2E2_2294 0.18 -0.3 2,715,476 - Pf6N2E2_2294 0.18 +0.6 2,715,476 - Pf6N2E2_2294 0.18 +0.2 2,715,556 + Pf6N2E2_2294 0.23 +0.4 2,715,557 - Pf6N2E2_2294 0.23 +1.4 2,715,626 + Pf6N2E2_2294 0.26 -1.0 2,715,627 - Pf6N2E2_2294 0.26 +0.3 2,715,700 + Pf6N2E2_2294 0.30 -0.2 2,715,700 + Pf6N2E2_2294 0.30 -1.8 2,715,701 - Pf6N2E2_2294 0.30 -0.9
Or see this region's nucleotide sequence