Experiment: KB with Nonanoic 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4778 and Psyr_4779 are separated by 2 nucleotides Psyr_4779 and Psyr_4780 overlap by 11 nucleotides
Psyr_4778: Psyr_4778 - hypothetical protein, at 5,658,739 to 5,665,875
_4778
Psyr_4779: Psyr_4779 - electron transfer flavoprotein, beta subunit, at 5,665,878 to 5,666,675
_4779
Psyr_4780: Psyr_4780 - Electron transfer flavoprotein, alpha subunit, at 5,666,665 to 5,667,885
_4780
Position (kb) 5665
5666
5667 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 5664.898 kb on - strand, within Psyr_4778 at 5664.898 kb on - strand, within Psyr_4778 at 5664.898 kb on - strand, within Psyr_4778 at 5664.900 kb on + strand, within Psyr_4778 at 5664.900 kb on + strand, within Psyr_4778 at 5664.900 kb on + strand, within Psyr_4778 at 5664.900 kb on + strand, within Psyr_4778 at 5664.900 kb on + strand, within Psyr_4778 at 5664.901 kb on - strand, within Psyr_4778 at 5664.901 kb on - strand, within Psyr_4778 at 5664.998 kb on - strand, within Psyr_4778 at 5664.998 kb on - strand, within Psyr_4778 at 5664.998 kb on - strand, within Psyr_4778 at 5664.998 kb on - strand, within Psyr_4778 at 5665.039 kb on + strand, within Psyr_4778 at 5665.070 kb on - strand, within Psyr_4778 at 5665.159 kb on + strand, within Psyr_4778 at 5665.159 kb on + strand, within Psyr_4778 at 5665.159 kb on + strand, within Psyr_4778 at 5665.252 kb on + strand at 5665.252 kb on + strand at 5665.295 kb on + strand at 5665.295 kb on + strand at 5665.295 kb on + strand at 5665.295 kb on + strand at 5665.295 kb on + strand at 5665.296 kb on - strand at 5665.296 kb on - strand at 5665.296 kb on - strand at 5665.296 kb on - strand at 5665.296 kb on - strand at 5665.369 kb on + strand at 5665.369 kb on + strand at 5665.369 kb on + strand at 5665.369 kb on + strand at 5665.369 kb on + strand at 5665.369 kb on + strand at 5665.369 kb on + strand at 5665.369 kb on + strand at 5665.369 kb on + strand at 5665.369 kb on + strand at 5665.369 kb on + strand at 5665.370 kb on - strand at 5665.370 kb on - strand at 5665.370 kb on - strand at 5665.370 kb on - strand at 5665.378 kb on - strand at 5665.378 kb on - strand at 5665.378 kb on - strand at 5665.424 kb on + strand at 5665.424 kb on + strand at 5665.425 kb on - strand at 5665.425 kb on - strand at 5665.425 kb on - strand at 5665.434 kb on + strand at 5665.480 kb on + strand at 5665.480 kb on + strand at 5665.480 kb on + strand at 5665.481 kb on - strand at 5665.481 kb on - strand at 5665.481 kb on - strand at 5665.481 kb on - strand at 5665.481 kb on - strand at 5665.506 kb on + strand at 5665.570 kb on + strand at 5665.570 kb on + strand at 5665.570 kb on + strand at 5665.570 kb on + strand at 5665.570 kb on + strand at 5665.570 kb on + strand at 5665.571 kb on - strand at 5665.571 kb on - strand at 5665.571 kb on - strand at 5665.571 kb on - strand at 5665.571 kb on - strand at 5665.571 kb on - strand at 5665.592 kb on + strand at 5665.592 kb on + strand at 5665.592 kb on + strand at 5665.592 kb on + strand at 5665.593 kb on - strand at 5665.607 kb on + strand at 5665.608 kb on - strand at 5665.798 kb on - strand at 5665.804 kb on + strand at 5665.804 kb on + strand at 5665.810 kb on + strand at 5665.810 kb on + strand at 5665.810 kb on + strand at 5665.810 kb on + strand at 5665.811 kb on - strand at 5665.811 kb on - strand at 5665.851 kb on + strand at 5665.851 kb on + strand at 5665.879 kb on + strand at 5665.879 kb on + strand at 5665.879 kb on + strand at 5665.879 kb on + strand at 5665.879 kb on + strand at 5665.880 kb on - strand at 5666.079 kb on + strand, within Psyr_4779 at 5666.080 kb on - strand, within Psyr_4779 at 5666.401 kb on + strand, within Psyr_4779 at 5666.402 kb on - strand, within Psyr_4779 at 5666.480 kb on - strand, within Psyr_4779 at 5666.480 kb on - strand, within Psyr_4779 at 5666.480 kb on - strand, within Psyr_4779 at 5666.532 kb on - strand, within Psyr_4779 at 5666.651 kb on + strand at 5666.683 kb on - strand at 5666.728 kb on + strand at 5666.728 kb on + strand at 5666.728 kb on + strand at 5666.729 kb on - strand at 5666.856 kb on + strand, within Psyr_4780 at 5666.857 kb on - strand, within Psyr_4780 at 5666.870 kb on + strand, within Psyr_4780 at 5666.870 kb on + strand, within Psyr_4780 at 5666.870 kb on + strand, within Psyr_4780 at 5666.870 kb on + strand, within Psyr_4780 at 5666.871 kb on - strand, within Psyr_4780 at 5666.871 kb on - strand, within Psyr_4780 at 5666.871 kb on - strand, within Psyr_4780 at 5666.871 kb on - strand, within Psyr_4780 at 5666.871 kb on - strand, within Psyr_4780 at 5666.871 kb on - strand, within Psyr_4780 at 5666.871 kb on - strand, within Psyr_4780 at 5667.248 kb on - strand, within Psyr_4780 at 5667.248 kb on - strand, within Psyr_4780 at 5667.616 kb on - strand, within Psyr_4780 at 5667.617 kb on + strand, within Psyr_4780 at 5667.617 kb on + strand, within Psyr_4780 at 5667.617 kb on + strand, within Psyr_4780 at 5667.617 kb on + strand, within Psyr_4780 at 5667.617 kb on + strand, within Psyr_4780 at 5667.617 kb on + strand, within Psyr_4780 at 5667.617 kb on + strand, within Psyr_4780 at 5667.617 kb on + strand, within Psyr_4780 at 5667.617 kb on + strand, within Psyr_4780 at 5667.618 kb on - strand, within Psyr_4780 at 5667.618 kb on - strand, within Psyr_4780 at 5667.618 kb on - strand, within Psyr_4780 at 5667.618 kb on - strand, within Psyr_4780 at 5667.618 kb on - strand, within Psyr_4780 at 5667.618 kb on - strand, within Psyr_4780 at 5667.618 kb on - strand, within Psyr_4780 at 5667.618 kb on - strand, within Psyr_4780 at 5667.618 kb on - strand, within Psyr_4780 at 5667.618 kb on - strand, within Psyr_4780 at 5667.618 kb on - strand, within Psyr_4780 at 5667.618 kb on - strand, within Psyr_4780 at 5667.618 kb on - strand, within Psyr_4780 at 5667.649 kb on + strand, within Psyr_4780
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Nonanoic 10 mM remove 5,664,898 - Psyr_4778 0.86 -0.7 5,664,898 - Psyr_4778 0.86 +0.6 5,664,898 - Psyr_4778 0.86 -1.1 5,664,900 + Psyr_4778 0.86 -0.6 5,664,900 + Psyr_4778 0.86 +0.4 5,664,900 + Psyr_4778 0.86 +0.5 5,664,900 + Psyr_4778 0.86 +0.5 5,664,900 + Psyr_4778 0.86 -1.0 5,664,901 - Psyr_4778 0.86 -0.4 5,664,901 - Psyr_4778 0.86 -0.1 5,664,998 - Psyr_4778 0.88 +0.8 5,664,998 - Psyr_4778 0.88 -0.8 5,664,998 - Psyr_4778 0.88 -0.2 5,664,998 - Psyr_4778 0.88 +1.1 5,665,039 + Psyr_4778 0.88 -1.1 5,665,070 - Psyr_4778 0.89 +2.4 5,665,159 + Psyr_4778 0.90 +1.4 5,665,159 + Psyr_4778 0.90 +0.8 5,665,159 + Psyr_4778 0.90 +0.0 5,665,252 + -1.2 5,665,252 + -0.0 5,665,295 + +0.5 5,665,295 + +1.5 5,665,295 + -0.6 5,665,295 + -0.3 5,665,295 + +0.8 5,665,296 - -0.1 5,665,296 - +0.8 5,665,296 - -0.5 5,665,296 - -0.2 5,665,296 - -0.8 5,665,369 + -1.1 5,665,369 + -0.3 5,665,369 + +1.1 5,665,369 + -0.1 5,665,369 + -0.6 5,665,369 + -0.1 5,665,369 + -1.2 5,665,369 + -0.3 5,665,369 + +0.7 5,665,369 + -0.1 5,665,369 + +0.0 5,665,370 - +0.2 5,665,370 - +0.4 5,665,370 - -0.3 5,665,370 - -1.8 5,665,378 - +0.6 5,665,378 - -2.4 5,665,378 - +1.9 5,665,424 + -0.5 5,665,424 + -0.6 5,665,425 - +0.1 5,665,425 - +0.1 5,665,425 - +0.4 5,665,434 + -0.7 5,665,480 + +0.6 5,665,480 + -0.6 5,665,480 + -1.2 5,665,481 - -0.2 5,665,481 - +0.2 5,665,481 - -1.5 5,665,481 - -1.0 5,665,481 - -0.6 5,665,506 + +0.6 5,665,570 + -0.4 5,665,570 + +1.2 5,665,570 + -1.5 5,665,570 + -0.2 5,665,570 + -1.4 5,665,570 + +0.6 5,665,571 - -0.5 5,665,571 - +0.3 5,665,571 - -1.5 5,665,571 - +1.0 5,665,571 - -0.8 5,665,571 - +0.4 5,665,592 + +0.7 5,665,592 + +2.8 5,665,592 + +0.4 5,665,592 + -0.3 5,665,593 - -0.2 5,665,607 + -1.3 5,665,608 - -0.1 5,665,798 - -0.4 5,665,804 + -1.7 5,665,804 + -0.3 5,665,810 + -0.5 5,665,810 + -0.4 5,665,810 + -0.2 5,665,810 + +0.3 5,665,811 - +0.2 5,665,811 - -0.3 5,665,851 + +0.9 5,665,851 + +0.5 5,665,879 + -0.4 5,665,879 + +0.1 5,665,879 + +0.4 5,665,879 + -0.3 5,665,879 + +1.6 5,665,880 - +1.2 5,666,079 + Psyr_4779 0.25 -2.0 5,666,080 - Psyr_4779 0.25 -1.0 5,666,401 + Psyr_4779 0.66 -0.7 5,666,402 - Psyr_4779 0.66 +2.9 5,666,480 - Psyr_4779 0.75 -1.3 5,666,480 - Psyr_4779 0.75 -0.2 5,666,480 - Psyr_4779 0.75 +0.5 5,666,532 - Psyr_4779 0.82 -0.9 5,666,651 + -0.9 5,666,683 - +4.9 5,666,728 + -1.2 5,666,728 + +0.1 5,666,728 + +0.4 5,666,729 - -0.5 5,666,856 + Psyr_4780 0.16 +0.8 5,666,857 - Psyr_4780 0.16 +0.4 5,666,870 + Psyr_4780 0.17 +0.2 5,666,870 + Psyr_4780 0.17 +0.4 5,666,870 + Psyr_4780 0.17 +0.2 5,666,870 + Psyr_4780 0.17 -0.3 5,666,871 - Psyr_4780 0.17 -1.2 5,666,871 - Psyr_4780 0.17 -0.1 5,666,871 - Psyr_4780 0.17 -1.1 5,666,871 - Psyr_4780 0.17 -1.2 5,666,871 - Psyr_4780 0.17 +3.4 5,666,871 - Psyr_4780 0.17 -0.6 5,666,871 - Psyr_4780 0.17 -0.1 5,667,248 - Psyr_4780 0.48 +1.4 5,667,248 - Psyr_4780 0.48 +1.7 5,667,616 - Psyr_4780 0.78 +1.6 5,667,617 + Psyr_4780 0.78 +1.0 5,667,617 + Psyr_4780 0.78 +0.7 5,667,617 + Psyr_4780 0.78 -0.5 5,667,617 + Psyr_4780 0.78 +0.8 5,667,617 + Psyr_4780 0.78 -0.5 5,667,617 + Psyr_4780 0.78 +0.0 5,667,617 + Psyr_4780 0.78 +0.6 5,667,617 + Psyr_4780 0.78 -0.2 5,667,617 + Psyr_4780 0.78 -1.6 5,667,618 - Psyr_4780 0.78 +3.4 5,667,618 - Psyr_4780 0.78 -0.4 5,667,618 - Psyr_4780 0.78 -2.4 5,667,618 - Psyr_4780 0.78 +1.0 5,667,618 - Psyr_4780 0.78 -0.6 5,667,618 - Psyr_4780 0.78 -1.2 5,667,618 - Psyr_4780 0.78 -0.0 5,667,618 - Psyr_4780 0.78 +0.1 5,667,618 - Psyr_4780 0.78 -1.4 5,667,618 - Psyr_4780 0.78 +0.9 5,667,618 - Psyr_4780 0.78 +0.8 5,667,618 - Psyr_4780 0.78 +2.8 5,667,618 - Psyr_4780 0.78 +0.4 5,667,649 + Psyr_4780 0.81 +0.6
Or see this region's nucleotide sequence