Experiment: KB with Nonanoic 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3807 and Psyr_3808 overlap by 4 nucleotides Psyr_3808 and Psyr_3809 overlap by 4 nucleotides
Psyr_3807: Psyr_3807 - hypothetical protein, at 4,527,902 to 4,529,116
_3807
Psyr_3808: Psyr_3808 - hypothetical protein, at 4,529,113 to 4,529,592
_3808
Psyr_3809: Psyr_3809 - hypothetical protein, at 4,529,589 to 4,531,439
_3809
Position (kb) 4529
4530 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4528.140 kb on + strand, within Psyr_3807 at 4528.407 kb on - strand, within Psyr_3807 at 4528.410 kb on + strand, within Psyr_3807 at 4528.410 kb on + strand, within Psyr_3807 at 4528.410 kb on + strand, within Psyr_3807 at 4528.411 kb on - strand, within Psyr_3807 at 4528.411 kb on - strand, within Psyr_3807 at 4528.411 kb on - strand, within Psyr_3807 at 4528.592 kb on + strand, within Psyr_3807 at 4528.606 kb on - strand, within Psyr_3807 at 4528.627 kb on + strand, within Psyr_3807 at 4528.704 kb on - strand, within Psyr_3807 at 4528.728 kb on + strand, within Psyr_3807 at 4528.805 kb on + strand, within Psyr_3807 at 4528.817 kb on - strand, within Psyr_3807 at 4528.883 kb on - strand, within Psyr_3807 at 4529.061 kb on - strand at 4529.334 kb on - strand, within Psyr_3808 at 4529.397 kb on + strand, within Psyr_3808 at 4529.397 kb on + strand, within Psyr_3808 at 4529.540 kb on + strand, within Psyr_3808 at 4529.627 kb on + strand at 4529.767 kb on + strand at 4529.809 kb on + strand, within Psyr_3809 at 4529.885 kb on + strand, within Psyr_3809 at 4529.887 kb on + strand, within Psyr_3809 at 4529.891 kb on + strand, within Psyr_3809 at 4529.924 kb on + strand, within Psyr_3809 at 4529.969 kb on + strand, within Psyr_3809 at 4529.970 kb on - strand, within Psyr_3809 at 4529.984 kb on - strand, within Psyr_3809 at 4530.006 kb on + strand, within Psyr_3809 at 4530.066 kb on - strand, within Psyr_3809 at 4530.212 kb on - strand, within Psyr_3809 at 4530.260 kb on - strand, within Psyr_3809 at 4530.370 kb on + strand, within Psyr_3809 at 4530.370 kb on + strand, within Psyr_3809 at 4530.489 kb on + strand, within Psyr_3809 at 4530.536 kb on + strand, within Psyr_3809
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Nonanoic 10 mM remove 4,528,140 + Psyr_3807 0.20 +0.0 4,528,407 - Psyr_3807 0.42 -0.2 4,528,410 + Psyr_3807 0.42 -0.9 4,528,410 + Psyr_3807 0.42 -2.3 4,528,410 + Psyr_3807 0.42 -1.7 4,528,411 - Psyr_3807 0.42 -1.5 4,528,411 - Psyr_3807 0.42 +1.5 4,528,411 - Psyr_3807 0.42 -0.4 4,528,592 + Psyr_3807 0.57 -0.3 4,528,606 - Psyr_3807 0.58 -0.7 4,528,627 + Psyr_3807 0.60 +3.7 4,528,704 - Psyr_3807 0.66 +0.1 4,528,728 + Psyr_3807 0.68 -0.7 4,528,805 + Psyr_3807 0.74 -2.1 4,528,817 - Psyr_3807 0.75 -0.5 4,528,883 - Psyr_3807 0.81 -0.9 4,529,061 - -2.0 4,529,334 - Psyr_3808 0.46 -1.8 4,529,397 + Psyr_3808 0.59 -0.7 4,529,397 + Psyr_3808 0.59 -0.2 4,529,540 + Psyr_3808 0.89 +0.1 4,529,627 + -0.6 4,529,767 + +2.1 4,529,809 + Psyr_3809 0.12 -1.1 4,529,885 + Psyr_3809 0.16 -2.1 4,529,887 + Psyr_3809 0.16 +0.5 4,529,891 + Psyr_3809 0.16 +1.7 4,529,924 + Psyr_3809 0.18 +3.0 4,529,969 + Psyr_3809 0.21 +2.1 4,529,970 - Psyr_3809 0.21 -0.8 4,529,984 - Psyr_3809 0.21 +0.9 4,530,006 + Psyr_3809 0.23 -0.3 4,530,066 - Psyr_3809 0.26 -0.2 4,530,212 - Psyr_3809 0.34 +0.1 4,530,260 - Psyr_3809 0.36 +0.1 4,530,370 + Psyr_3809 0.42 +0.1 4,530,370 + Psyr_3809 0.42 -0.8 4,530,489 + Psyr_3809 0.49 -1.2 4,530,536 + Psyr_3809 0.51 -1.7
Or see this region's nucleotide sequence