Experiment: Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03765 and SMc03766 are separated by 2 nucleotides SMc03766 and SMc03767 are separated by 509 nucleotides
SMc03765: SMc03765 - hypothetical protein, at 3,430,405 to 3,431,994
SMc03765
SMc03766: SMc03766 - hypothetical protein, at 3,431,997 to 3,432,764
SMc03766
SMc03767: SMc03767 - hypothetical protein, at 3,433,274 to 3,434,392
SMc03767
Position (kb)
3431
3432
3433 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 3431.024 kb on - strand, within SMc03765 at 3431.029 kb on + strand, within SMc03765 at 3431.030 kb on - strand, within SMc03765 at 3431.041 kb on - strand, within SMc03765 at 3431.056 kb on + strand, within SMc03765 at 3431.317 kb on + strand, within SMc03765 at 3431.356 kb on - strand, within SMc03765 at 3431.360 kb on + strand, within SMc03765 at 3431.360 kb on + strand, within SMc03765 at 3431.360 kb on + strand, within SMc03765 at 3431.372 kb on + strand, within SMc03765 at 3431.372 kb on + strand, within SMc03765 at 3431.498 kb on - strand, within SMc03765 at 3431.521 kb on + strand, within SMc03765 at 3431.521 kb on + strand, within SMc03765 at 3431.522 kb on - strand, within SMc03765 at 3431.527 kb on + strand, within SMc03765 at 3431.528 kb on - strand, within SMc03765 at 3431.551 kb on - strand, within SMc03765 at 3431.552 kb on + strand, within SMc03765 at 3431.552 kb on + strand, within SMc03765 at 3431.553 kb on - strand, within SMc03765 at 3431.593 kb on + strand, within SMc03765 at 3431.594 kb on - strand, within SMc03765 at 3431.638 kb on + strand, within SMc03765 at 3431.639 kb on - strand, within SMc03765 at 3431.639 kb on - strand, within SMc03765 at 3431.641 kb on + strand, within SMc03765 at 3431.642 kb on - strand, within SMc03765 at 3431.642 kb on - strand, within SMc03765 at 3431.684 kb on + strand, within SMc03765 at 3431.684 kb on + strand, within SMc03765 at 3431.685 kb on - strand, within SMc03765 at 3431.710 kb on - strand, within SMc03765 at 3431.732 kb on + strand, within SMc03765 at 3431.733 kb on - strand, within SMc03765 at 3431.760 kb on + strand, within SMc03765 at 3431.780 kb on + strand, within SMc03765 at 3431.780 kb on + strand, within SMc03765 at 3432.307 kb on + strand, within SMc03766 at 3432.321 kb on - strand, within SMc03766 at 3432.345 kb on + strand, within SMc03766 at 3432.408 kb on - strand, within SMc03766 at 3432.409 kb on + strand, within SMc03766 at 3432.409 kb on + strand, within SMc03766 at 3432.410 kb on - strand, within SMc03766 at 3432.410 kb on - strand, within SMc03766 at 3432.450 kb on + strand, within SMc03766 at 3432.450 kb on + strand, within SMc03766 at 3432.487 kb on + strand, within SMc03766 at 3432.488 kb on - strand, within SMc03766 at 3432.583 kb on - strand, within SMc03766 at 3432.635 kb on + strand, within SMc03766 at 3432.765 kb on - strand at 3432.817 kb on - strand at 3432.914 kb on + strand at 3433.026 kb on + strand at 3433.027 kb on - strand at 3433.083 kb on - strand at 3433.083 kb on - strand at 3433.180 kb on - strand at 3433.185 kb on - strand at 3433.337 kb on + strand at 3433.338 kb on - strand at 3433.356 kb on - strand at 3433.404 kb on + strand, within SMc03767 at 3433.515 kb on - strand, within SMc03767 at 3433.545 kb on - strand, within SMc03767 at 3433.590 kb on - strand, within SMc03767 at 3433.593 kb on - strand, within SMc03767 at 3433.615 kb on + strand, within SMc03767 at 3433.695 kb on - strand at 3433.747 kb on + strand, within SMc03767 at 3433.747 kb on + strand, within SMc03767
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) remove 3,431,024 - SMc03765 0.39 +0.6 3,431,029 + SMc03765 0.39 +0.6 3,431,030 - SMc03765 0.39 +0.9 3,431,041 - SMc03765 0.40 +0.8 3,431,056 + SMc03765 0.41 +1.4 3,431,317 + SMc03765 0.57 +1.1 3,431,356 - SMc03765 0.60 +0.4 3,431,360 + SMc03765 0.60 +0.4 3,431,360 + SMc03765 0.60 +0.8 3,431,360 + SMc03765 0.60 +0.7 3,431,372 + SMc03765 0.61 +4.4 3,431,372 + SMc03765 0.61 +0.8 3,431,498 - SMc03765 0.69 +1.2 3,431,521 + SMc03765 0.70 +2.2 3,431,521 + SMc03765 0.70 +1.1 3,431,522 - SMc03765 0.70 +0.3 3,431,527 + SMc03765 0.71 -3.6 3,431,528 - SMc03765 0.71 +2.2 3,431,551 - SMc03765 0.72 +0.6 3,431,552 + SMc03765 0.72 -0.1 3,431,552 + SMc03765 0.72 -1.2 3,431,553 - SMc03765 0.72 +0.7 3,431,593 + SMc03765 0.75 +1.7 3,431,594 - SMc03765 0.75 +0.6 3,431,638 + SMc03765 0.78 +1.9 3,431,639 - SMc03765 0.78 +0.4 3,431,639 - SMc03765 0.78 -0.1 3,431,641 + SMc03765 0.78 +1.0 3,431,642 - SMc03765 0.78 +1.0 3,431,642 - SMc03765 0.78 +0.6 3,431,684 + SMc03765 0.80 +1.0 3,431,684 + SMc03765 0.80 +0.5 3,431,685 - SMc03765 0.81 +2.4 3,431,710 - SMc03765 0.82 +0.2 3,431,732 + SMc03765 0.83 +0.9 3,431,733 - SMc03765 0.84 +0.4 3,431,760 + SMc03765 0.85 -1.2 3,431,780 + SMc03765 0.86 +1.6 3,431,780 + SMc03765 0.86 +5.6 3,432,307 + SMc03766 0.40 +0.7 3,432,321 - SMc03766 0.42 -0.9 3,432,345 + SMc03766 0.45 +1.2 3,432,408 - SMc03766 0.54 +0.4 3,432,409 + SMc03766 0.54 -0.0 3,432,409 + SMc03766 0.54 +2.3 3,432,410 - SMc03766 0.54 +0.9 3,432,410 - SMc03766 0.54 +1.2 3,432,450 + SMc03766 0.59 +0.3 3,432,450 + SMc03766 0.59 +1.2 3,432,487 + SMc03766 0.64 +1.2 3,432,488 - SMc03766 0.64 +0.7 3,432,583 - SMc03766 0.76 +2.0 3,432,635 + SMc03766 0.83 +0.2 3,432,765 - +1.6 3,432,817 - -0.7 3,432,914 + +0.5 3,433,026 + -0.2 3,433,027 - +1.4 3,433,083 - +0.3 3,433,083 - +0.6 3,433,180 - +0.9 3,433,185 - +0.8 3,433,337 + +1.2 3,433,338 - -0.4 3,433,356 - -1.0 3,433,404 + SMc03767 0.12 +1.2 3,433,515 - SMc03767 0.22 +0.4 3,433,545 - SMc03767 0.24 +0.2 3,433,590 - SMc03767 0.28 +0.9 3,433,593 - SMc03767 0.29 -0.1 3,433,615 + SMc03767 0.30 +0.7 3,433,695 - +1.4 3,433,747 + SMc03767 0.42 +0.9 3,433,747 + SMc03767 0.42 +0.4
Or see this region's nucleotide sequence