Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3492

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
4,072,397	-				-0.2
4,072,397	-				-0.2
4,072,397	-				+0.7
4,072,397	-				+1.0
4,072,397	-				-0.4
4,072,648	+		Pf6N2E2_3491	0.32	+0.7
4,072,649	-		Pf6N2E2_3491	0.32	+0.0
4,072,711	-		Pf6N2E2_3491	0.38	-0.7
4,072,751	+		Pf6N2E2_3491	0.42	+0.1
4,072,915	+		Pf6N2E2_3491	0.58	+1.3
4,072,924	+		Pf6N2E2_3491	0.59	-0.1
4,072,924	+		Pf6N2E2_3491	0.59	-0.0
4,072,925	-		Pf6N2E2_3491	0.59	+0.7
4,073,054	+		Pf6N2E2_3491	0.72	-0.4
4,073,055	-		Pf6N2E2_3491	0.72	-0.3
4,073,239	+		Pf6N2E2_3491	0.90	-0.1
4,073,239	+		Pf6N2E2_3491	0.90	-0.2
4,073,239	+		Pf6N2E2_3491	0.90	-0.9
4,073,240	-		Pf6N2E2_3491	0.90	+0.3
4,073,240	-		Pf6N2E2_3491	0.90	+0.1
4,073,556	+		Pf6N2E2_3492	0.17	-0.1
4,073,556	+		Pf6N2E2_3492	0.17	+0.2
4,073,557	-		Pf6N2E2_3492	0.18	+0.1
4,073,557	-		Pf6N2E2_3492	0.18	-0.3
4,073,622	+		Pf6N2E2_3492	0.23	-0.8
4,073,622	+		Pf6N2E2_3492	0.23	+0.1
4,073,622	+		Pf6N2E2_3492	0.23	-0.9
4,073,623	-		Pf6N2E2_3492	0.23	-0.5
4,073,623	-		Pf6N2E2_3492	0.23	-0.3
4,073,625	+		Pf6N2E2_3492	0.23	-0.0
4,073,626	-		Pf6N2E2_3492	0.23	-0.6
4,073,626	-		Pf6N2E2_3492	0.23	-0.5
4,073,679	+		Pf6N2E2_3492	0.27	-0.5
4,073,679	+		Pf6N2E2_3492	0.27	+0.7
4,073,680	-		Pf6N2E2_3492	0.27	+0.2
4,073,751	+		Pf6N2E2_3492	0.33	-0.1
4,074,350	+		Pf6N2E2_3492	0.80	-0.4
4,074,357	+		Pf6N2E2_3492	0.80	+0.4
4,074,358	-		Pf6N2E2_3492	0.80	+0.4
4,074,358	-		Pf6N2E2_3492	0.80	+0.8
4,074,480	+		Pf6N2E2_3492	0.90	-0.1
4,074,481	-		Pf6N2E2_3492	0.90	+1.1
4,074,481	-		Pf6N2E2_3492	0.90	+1.4
4,074,540	+				-0.3
4,074,540	+				+1.1
4,074,540	+				-0.5
4,074,540	+				+0.4
4,074,541	-				+1.2
4,074,541	-				+0.3
4,074,599	+				-0.2
4,074,599	+				-2.4
4,074,599	+				+1.4
4,074,600	-				+0.4
4,074,600	-				-0.9
4,074,600	-				+1.0
4,074,627	+				-0.9
4,074,627	+				-0.6
4,074,627	+				-0.2
4,074,628	-				-0.0
4,074,633	+				-0.2
4,074,633	+				-0.7
4,074,633	+				+0.5
4,074,641	+				-0.4
4,074,641	+				+1.4
4,074,642	-				-2.0
4,074,726	+				-0.5
4,074,726	+				+0.4
4,074,726	+				-0.5
4,074,727	-				-2.4
4,074,733	+				-0.4
4,074,733	+				+0.1
4,074,734	-				-2.5
4,074,817	+				+0.2
4,074,817	+				-0.2
4,074,817	+				+0.6
4,074,817	+				-0.9
4,074,817	+				+0.3
4,074,817	+				-0.5
4,074,820	-				-1.8
4,074,939	-				-2.9
4,075,009	+		Pf6N2E2_3493	0.15	+0.2
4,075,010	-		Pf6N2E2_3493	0.15	-2.2
4,075,010	-		Pf6N2E2_3493	0.15	-1.7
4,075,010	-		Pf6N2E2_3493	0.15	+0.4
4,075,010	-		Pf6N2E2_3493	0.15	-1.6
4,075,078	+		Pf6N2E2_3493	0.20	-0.5
4,075,300	+		Pf6N2E2_3493	0.37	-0.6
4,075,300	+		Pf6N2E2_3493	0.37	-1.1
4,075,301	-		Pf6N2E2_3493	0.37	-1.9
4,075,605	+		Pf6N2E2_3493	0.59	-1.0
4,075,606	-		Pf6N2E2_3493	0.59	-1.2