Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25345 and BWI76_RS25350 are separated by 15 nucleotides BWI76_RS25350 and BWI76_RS25355 are separated by 219 nucleotides BWI76_RS25355 and BWI76_RS25360 are separated by 190 nucleotides BWI76_RS25360 and BWI76_RS25365 are separated by 172 nucleotides
BWI76_RS25345: BWI76_RS25345 - 30S ribosomal protein S9, at 5,268,978 to 5,269,370
_RS25345
BWI76_RS25350: BWI76_RS25350 - 50S ribosomal protein L13, at 5,269,386 to 5,269,814
_RS25350
BWI76_RS25355: BWI76_RS25355 - cell division protein ZapE, at 5,270,034 to 5,271,167
_RS25355
BWI76_RS25360: BWI76_RS25360 - hypothetical protein, at 5,271,358 to 5,271,756
_RS25360
BWI76_RS25365: BWI76_RS25365 - serine endoprotease DegQ, at 5,271,929 to 5,273,296
_RS25365
Position (kb)
5270
5271
5272 Strain fitness (log2 ratio)
-1
0
1
2 at 5269.977 kb on + strand at 5270.031 kb on + strand at 5270.186 kb on + strand, within BWI76_RS25355 at 5270.294 kb on + strand, within BWI76_RS25355 at 5270.490 kb on + strand, within BWI76_RS25355 at 5270.654 kb on + strand, within BWI76_RS25355 at 5270.654 kb on + strand, within BWI76_RS25355 at 5270.807 kb on - strand, within BWI76_RS25355 at 5270.817 kb on + strand, within BWI76_RS25355 at 5270.942 kb on - strand, within BWI76_RS25355 at 5270.942 kb on - strand, within BWI76_RS25355 at 5271.148 kb on + strand at 5271.200 kb on - strand at 5271.230 kb on + strand at 5271.238 kb on - strand at 5271.811 kb on + strand at 5271.853 kb on - strand at 5271.916 kb on - strand at 5271.962 kb on + strand at 5271.969 kb on + strand at 5272.107 kb on - strand, within BWI76_RS25365
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 5,269,977 + -0.7 5,270,031 + +0.2 5,270,186 + BWI76_RS25355 0.13 +0.7 5,270,294 + BWI76_RS25355 0.23 +1.7 5,270,490 + BWI76_RS25355 0.40 +2.1 5,270,654 + BWI76_RS25355 0.55 +1.1 5,270,654 + BWI76_RS25355 0.55 +0.7 5,270,807 - BWI76_RS25355 0.68 +0.8 5,270,817 + BWI76_RS25355 0.69 +1.2 5,270,942 - BWI76_RS25355 0.80 +1.0 5,270,942 - BWI76_RS25355 0.80 +0.4 5,271,148 + +1.1 5,271,200 - -0.8 5,271,230 + +0.9 5,271,238 - -0.8 5,271,811 + -0.4 5,271,853 - +1.2 5,271,916 - -0.7 5,271,962 + -1.2 5,271,969 + +0.0 5,272,107 - BWI76_RS25365 0.13 +0.1
Or see this region's nucleotide sequence