Strain Fitness in Pantoea sp. MT58 around IAI47_07325

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
1,548,132	-		IAI47_07315	0.88	+1.6
1,548,132	-		IAI47_07315	0.88	-0.6
1,548,178	+		IAI47_07315	0.90	+1.4
1,548,178	+		IAI47_07315	0.90	-0.3
1,548,179	-		IAI47_07315	0.90	-1.7
1,548,179	-		IAI47_07315	0.90	-2.0
1,548,192	-				-1.0
1,548,192	-				+0.6
1,548,200	+				-0.5
1,548,200	+				-0.9
1,548,200	+				+1.1
1,548,200	+				-0.3
1,548,200	+				+1.8
1,548,200	+				+0.9
1,548,200	+				+2.9
1,548,200	+				+1.5
1,548,201	-				+0.7
1,548,201	-				-1.9
1,548,201	-				+1.3
1,548,201	-				+0.9
1,548,201	-				-0.4
1,548,201	-				-0.1
1,548,201	-				-0.1
1,548,201	-				+0.7
1,548,201	-				-0.9
1,548,201	-				-1.4
1,548,239	+				-1.4
1,548,239	+				-0.7
1,548,240	-				+0.8
1,548,240	-				-0.8
1,548,292	+				-0.1
1,548,292	+				+0.2
1,548,292	+				+1.2
1,548,293	-				+0.2
1,548,293	-				+0.9
1,548,293	-				-0.2
1,548,312	+				+0.7
1,548,312	+				+1.7
1,548,312	+				+0.2
1,548,312	+				+2.0
1,548,312	+				-0.0
1,548,312	+				+0.9
1,548,313	-				+1.9
1,548,313	-				-1.4
1,548,313	-				-0.3
1,548,313	-				+0.3
1,548,459	+				+0.6
1,548,459	+				+0.5
1,548,459	+				-0.4
1,548,459	+				+0.2
1,548,534	+				-0.8
1,548,534	+				+1.5
1,548,535	-				-0.2
1,548,535	-				+0.1
1,548,535	-				-0.7
1,548,535	-				+2.5
1,548,535	-				-2.0
1,548,535	-				+0.6
1,548,535	-				-1.0
1,548,535	-				-1.7
1,548,603	-				+1.1
1,548,669	+		IAI47_07320	0.19	+0.3
1,548,669	+		IAI47_07320	0.19	+0.9
1,548,670	-		IAI47_07320	0.19	+0.7
1,548,681	+		IAI47_07320	0.21	-2.2
1,548,681	+		IAI47_07320	0.21	+0.9
1,548,681	+		IAI47_07320	0.21	+0.4
1,548,682	-		IAI47_07320	0.21	-0.3
1,548,682	-		IAI47_07320	0.21	-0.2
1,548,684	+		IAI47_07320	0.21	+1.7
1,548,685	-		IAI47_07320	0.22	+1.3
1,548,685	-		IAI47_07320	0.22	+1.1
1,548,685	-		IAI47_07320	0.22	+0.4
1,548,685	-		IAI47_07320	0.22	+0.3
1,548,685	-		IAI47_07320	0.22	+0.9
1,548,738	+		IAI47_07320	0.32	-0.1
1,548,739	-		IAI47_07320	0.32	-1.2
1,548,739	-		IAI47_07320	0.32	+0.3
1,548,756	+		IAI47_07320	0.35	-0.5
1,548,756	+		IAI47_07320	0.35	+0.4
1,548,756	+		IAI47_07320	0.35	-0.4
1,548,756	+		IAI47_07320	0.35	+1.0
1,548,756	+		IAI47_07320	0.35	+1.2
1,548,757	-		IAI47_07320	0.35	-0.0
1,548,757	-		IAI47_07320	0.35	+0.8
1,548,757	-		IAI47_07320	0.35	-0.7
1,548,757	-		IAI47_07320	0.35	+1.3
1,548,757	-		IAI47_07320	0.35	+0.4
1,548,757	-		IAI47_07320	0.35	+0.6
1,548,850	-		IAI47_07320	0.53	-0.9
1,548,850	-		IAI47_07320	0.53	-0.8
1,548,856	+		IAI47_07320	0.54	+0.7
1,548,916	+		IAI47_07320	0.65	-0.9
1,548,917	-		IAI47_07320	0.66	-0.3
1,548,945	+		IAI47_07320	0.71	-1.0
1,548,945	+		IAI47_07320	0.71	-0.1
1,548,946	-		IAI47_07320	0.71	+0.6
1,548,946	-		IAI47_07320	0.71	-1.5
1,548,946	-		IAI47_07320	0.71	+0.9
1,548,969	-		IAI47_07320	0.75	-1.0
1,548,975	+		IAI47_07320	0.77	+0.7
1,548,975	+		IAI47_07320	0.77	+0.9
1,548,996	+		IAI47_07320	0.80	+0.1
1,548,996	+		IAI47_07320	0.80	-2.9
1,548,997	-		IAI47_07320	0.81	+1.7
1,549,021	+		IAI47_07320	0.85	-1.0
1,549,021	+		IAI47_07320	0.85	-0.0
1,549,021	+		IAI47_07320	0.85	+0.6
1,549,021	+		IAI47_07320	0.85	+0.6
1,549,022	-		IAI47_07320	0.85	+0.1
1,549,022	-		IAI47_07320	0.85	-1.2
1,549,022	-		IAI47_07320	0.85	+0.9
1,549,073	+				-0.8
1,549,090	+				-1.0
1,549,090	+				-1.4
1,549,096	+				+0.5
1,549,097	-				-0.3
1,549,141	+				+1.9
1,549,142	-				-0.7
1,549,142	-				-0.9
1,549,156	+				+3.2
1,549,156	+				+0.4
1,549,156	+				+1.9
1,549,156	+				-0.2
1,549,157	-				+0.2
1,549,159	+				-0.1
1,549,172	+				-1.2
1,549,206	-		IAI47_07325	0.16	-0.3
1,549,244	+		IAI47_07325	0.23	-1.1
1,549,245	-		IAI47_07325	0.23	+0.1
1,549,245	-		IAI47_07325	0.23	+0.9
1,549,245	-		IAI47_07325	0.23	-0.8
1,549,255	+		IAI47_07325	0.25	+1.9
1,549,255	+		IAI47_07325	0.25	-0.6
1,549,288	+		IAI47_07325	0.31	-1.6
1,549,288	+		IAI47_07325	0.31	+0.3
1,549,289	-		IAI47_07325	0.31	-2.5
1,549,289	-		IAI47_07325	0.31	+0.1
1,549,367	+		IAI47_07325	0.46	-1.8
1,549,368	-		IAI47_07325	0.46	-1.1
1,549,392	-		IAI47_07325	0.51	+0.4
1,549,397	-		IAI47_07325	0.51	-1.0
1,549,463	+		IAI47_07325	0.64	-0.4
1,549,464	-		IAI47_07325	0.64	-1.4
1,549,479	+		IAI47_07325	0.67	-0.6
1,549,479	+		IAI47_07325	0.67	-1.4
1,549,479	+		IAI47_07325	0.67	-0.8
1,549,483	+		IAI47_07325	0.67	+1.9
1,549,486	-		IAI47_07325	0.68	-0.7
1,549,486	-		IAI47_07325	0.68	-1.2
1,549,572	+		IAI47_07325	0.84	-0.6
1,549,572	+		IAI47_07325	0.84	-0.8
1,549,584	+		IAI47_07325	0.86	-0.3
1,549,584	+		IAI47_07325	0.86	+0.4
1,549,584	+		IAI47_07325	0.86	-3.0
1,549,584	+		IAI47_07325	0.86	-0.3
1,549,584	+		IAI47_07325	0.86	-0.2
1,549,584	+		IAI47_07325	0.86	-1.5
1,549,584	+		IAI47_07325	0.86	+0.3
1,549,584	+		IAI47_07325	0.86	-1.1
1,549,584	+		IAI47_07325	0.86	+0.2
1,549,584	+		IAI47_07325	0.86	+0.6
1,549,585	-		IAI47_07325	0.86	-0.1
1,549,585	-		IAI47_07325	0.86	-1.2
1,549,585	-		IAI47_07325	0.86	-2.2
1,549,585	-		IAI47_07325	0.86	-1.7
1,549,585	-		IAI47_07325	0.86	-0.7
1,549,588	+		IAI47_07325	0.87	-1.5
1,549,588	+		IAI47_07325	0.87	-1.5
1,549,588	+		IAI47_07325	0.87	-0.5
1,549,589	-		IAI47_07325	0.87	+0.3
1,549,589	-		IAI47_07325	0.87	-0.4
1,549,601	+		IAI47_07325	0.89	+0.3
1,549,601	+		IAI47_07325	0.89	-0.1
1,549,601	+		IAI47_07325	0.89	-2.8
1,549,602	-		IAI47_07325	0.89	+0.2
1,549,602	-		IAI47_07325	0.89	+1.2
1,549,651	-				+0.1
1,549,651	-				-1.2
1,549,662	+				+1.0
1,549,662	+				-0.4
1,549,672	-				+0.1
1,549,683	+				-0.7
1,549,683	+				-1.1
1,549,686	-				-0.8
1,549,694	+				+0.6
1,549,696	-				-0.9
1,549,736	-				-1.5
1,549,751	+				-0.9
1,549,752	-				-0.9
1,549,775	+				+1.2
1,549,775	+				-1.1
1,549,780	-				+0.5
1,549,780	-				-1.4
1,549,827	+				+1.9
1,549,827	+				-1.2
1,549,840	+				-1.1
1,549,911	+		IAI47_07330	0.15	+0.5
1,549,911	+		IAI47_07330	0.15	-1.3
1,549,911	+		IAI47_07330	0.15	-0.6
1,549,912	-		IAI47_07330	0.15	-0.1
1,549,924	+		IAI47_07330	0.17	-1.0
1,549,952	+		IAI47_07330	0.21	-2.5
1,549,954	+		IAI47_07330	0.21	-2.1
1,549,974	+		IAI47_07330	0.24	-0.6
1,549,975	-		IAI47_07330	0.24	+1.3
1,549,977	+		IAI47_07330	0.24	+2.8
1,549,989	+		IAI47_07330	0.26	-1.7
1,550,044	+		IAI47_07330	0.33	-1.4
1,550,045	-		IAI47_07330	0.34	-0.3
1,550,074	+		IAI47_07330	0.38	-0.2
1,550,116	+		IAI47_07330	0.43	-1.0
1,550,117	-		IAI47_07330	0.43	-0.7
1,550,120	+		IAI47_07330	0.44	-1.3
1,550,121	-		IAI47_07330	0.44	-0.7
1,550,121	-		IAI47_07330	0.44	-2.1
1,550,122	+		IAI47_07330	0.44	-2.1
1,550,123	-		IAI47_07330	0.44	-0.3
1,550,128	+		IAI47_07330	0.45	-0.3
1,550,128	+		IAI47_07330	0.45	+0.8
1,550,191	+		IAI47_07330	0.54	-1.0
1,550,192	-		IAI47_07330	0.54	-0.1
1,550,195	+		IAI47_07330	0.54	-2.3
1,550,196	-		IAI47_07330	0.54	-0.6
1,550,199	-		IAI47_07330	0.55	-0.3
1,550,204	+		IAI47_07330	0.55	-2.5
1,550,205	-		IAI47_07330	0.55	-0.6
1,550,205	-		IAI47_07330	0.55	-1.8
1,550,233	+		IAI47_07330	0.59	-1.4
1,550,234	-		IAI47_07330	0.59	-1.8
1,550,234	-		IAI47_07330	0.59	+0.4
1,550,234	-		IAI47_07330	0.59	-0.5
1,550,236	-		IAI47_07330	0.60	+0.7
1,550,236	-		IAI47_07330	0.60	-0.3
1,550,236	-		IAI47_07330	0.60	-1.6
1,550,251	+		IAI47_07330	0.62	-0.0
1,550,266	+		IAI47_07330	0.64	-1.7
1,550,275	-		IAI47_07330	0.65	-0.4
1,550,275	-		IAI47_07330	0.65	-1.1
1,550,276	+		IAI47_07330	0.65	-2.4
1,550,276	+		IAI47_07330	0.65	-2.5
1,550,276	+		IAI47_07330	0.65	-1.7
1,550,276	+		IAI47_07330	0.65	+1.3
1,550,277	-		IAI47_07330	0.65	-1.9
1,550,277	-		IAI47_07330	0.65	-0.4
1,550,277	-		IAI47_07330	0.65	+0.0
1,550,280	+		IAI47_07330	0.66	+1.3
1,550,280	+		IAI47_07330	0.66	-1.3
1,550,280	+		IAI47_07330	0.66	-1.8
1,550,281	-		IAI47_07330	0.66	-0.4
1,550,281	-		IAI47_07330	0.66	-0.0
1,550,281	-		IAI47_07330	0.66	-1.3
1,550,317	+		IAI47_07330	0.71	-0.3
1,550,329	+		IAI47_07330	0.72	-0.3
1,550,394	-		IAI47_07330	0.81	-1.4
1,550,398	+		IAI47_07330	0.82	-0.1
1,550,398	+		IAI47_07330	0.82	-0.4
1,550,447	-		IAI47_07330	0.89	-2.4
1,550,449	-		IAI47_07330	0.89	+0.3
1,550,461	-				-1.3
1,550,461	-				+1.9
1,550,528	+				-1.1
1,550,528	+				-1.0
1,550,545	+				+0.8
1,550,564	-				-1.4
1,550,578	+				-0.0
1,550,639	-				+0.2
1,550,639	-				+1.4
1,550,644	+				-1.3
1,550,645	-				+0.7