Experiment: Maltitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3186 and Atu3187 are separated by 9 nucleotides Atu3187 and Atu3188 overlap by 1 nucleotides Atu3188 and Atu3189 are separated by 60 nucleotides
Atu3186: Atu3186 - glycerol-3-phosphate ABC transporter permease, at 195,977 to 196,858
Atu3186
Atu3187: Atu3187 - glycerol-3-phosphate ABC transporter permease, at 196,868 to 197,716
Atu3187
Atu3188: Atu3188 - glycerol-3-phosphate transporter ATP-binding subunit, at 197,716 to 198,777
Atu3188
Atu3189: Atu3189 - hypothetical protein, at 198,838 to 199,581
Atu3189
Position (kb) 197
198
199 Strain fitness (log2 ratio) -2
-1
0
1
2 at 196.729 kb on + strand, within Atu3186 at 196.805 kb on + strand at 196.847 kb on + strand at 197.004 kb on + strand, within Atu3187 at 197.004 kb on + strand, within Atu3187 at 197.027 kb on - strand, within Atu3187 at 197.109 kb on - strand, within Atu3187 at 197.265 kb on + strand, within Atu3187 at 197.309 kb on - strand, within Atu3187 at 197.397 kb on - strand, within Atu3187 at 197.429 kb on - strand, within Atu3187 at 197.510 kb on - strand, within Atu3187 at 197.604 kb on - strand, within Atu3187 at 197.606 kb on + strand, within Atu3187 at 197.606 kb on + strand, within Atu3187 at 197.652 kb on - strand at 197.677 kb on + strand at 197.694 kb on + strand at 197.770 kb on + strand at 197.778 kb on - strand at 197.898 kb on + strand, within Atu3188 at 197.958 kb on - strand, within Atu3188 at 198.032 kb on - strand, within Atu3188 at 198.059 kb on + strand, within Atu3188 at 198.059 kb on + strand, within Atu3188 at 198.140 kb on - strand, within Atu3188 at 198.145 kb on + strand, within Atu3188 at 198.220 kb on - strand, within Atu3188 at 198.226 kb on + strand, within Atu3188 at 198.290 kb on + strand, within Atu3188 at 198.300 kb on + strand, within Atu3188 at 198.376 kb on - strand, within Atu3188 at 198.470 kb on - strand, within Atu3188 at 198.544 kb on - strand, within Atu3188 at 198.593 kb on - strand, within Atu3188 at 198.595 kb on + strand, within Atu3188 at 198.595 kb on + strand, within Atu3188 at 198.632 kb on + strand, within Atu3188 at 198.640 kb on - strand, within Atu3188 at 198.640 kb on - strand, within Atu3188 at 198.689 kb on + strand at 198.689 kb on + strand at 198.689 kb on + strand at 198.689 kb on + strand at 198.694 kb on + strand at 198.702 kb on - strand at 198.720 kb on - strand at 198.732 kb on + strand at 198.732 kb on + strand at 198.732 kb on + strand at 198.740 kb on - strand at 198.740 kb on - strand at 198.740 kb on - strand at 198.789 kb on + strand at 198.833 kb on - strand at 198.833 kb on - strand at 198.868 kb on + strand at 199.093 kb on + strand, within Atu3189 at 199.093 kb on + strand, within Atu3189 at 199.093 kb on + strand, within Atu3189 at 199.160 kb on + strand, within Atu3189 at 199.236 kb on + strand, within Atu3189 at 199.267 kb on - strand, within Atu3189 at 199.268 kb on - strand, within Atu3189 at 199.369 kb on + strand, within Atu3189 at 199.376 kb on - strand, within Atu3189 at 199.377 kb on - strand, within Atu3189 at 199.387 kb on - strand, within Atu3189 at 199.412 kb on + strand, within Atu3189 at 199.451 kb on + strand, within Atu3189 at 199.459 kb on - strand, within Atu3189 at 199.569 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Maltitol (C) remove 196,729 + Atu3186 0.85 +1.8 196,805 + -0.2 196,847 + -0.7 197,004 + Atu3187 0.16 +0.1 197,004 + Atu3187 0.16 +0.3 197,027 - Atu3187 0.19 -0.4 197,109 - Atu3187 0.28 +0.3 197,265 + Atu3187 0.47 -0.2 197,309 - Atu3187 0.52 -0.9 197,397 - Atu3187 0.62 +0.4 197,429 - Atu3187 0.66 -0.1 197,510 - Atu3187 0.76 +0.5 197,604 - Atu3187 0.87 -0.5 197,606 + Atu3187 0.87 -0.0 197,606 + Atu3187 0.87 -0.2 197,652 - -0.9 197,677 + +0.2 197,694 + -0.3 197,770 + -0.1 197,778 - +1.2 197,898 + Atu3188 0.17 +1.1 197,958 - Atu3188 0.23 -0.1 198,032 - Atu3188 0.30 -0.4 198,059 + Atu3188 0.32 -0.2 198,059 + Atu3188 0.32 +0.5 198,140 - Atu3188 0.40 +0.1 198,145 + Atu3188 0.40 -0.0 198,220 - Atu3188 0.47 -0.2 198,226 + Atu3188 0.48 -0.5 198,290 + Atu3188 0.54 +1.0 198,300 + Atu3188 0.55 +0.2 198,376 - Atu3188 0.62 -0.4 198,470 - Atu3188 0.71 +0.3 198,544 - Atu3188 0.78 -0.9 198,593 - Atu3188 0.83 -0.1 198,595 + Atu3188 0.83 -0.3 198,595 + Atu3188 0.83 +0.2 198,632 + Atu3188 0.86 -0.3 198,640 - Atu3188 0.87 -0.1 198,640 - Atu3188 0.87 -0.3 198,689 + -0.3 198,689 + +0.6 198,689 + +0.4 198,689 + +0.1 198,694 + -0.4 198,702 - -1.9 198,720 - -0.3 198,732 + +0.1 198,732 + -0.1 198,732 + -0.4 198,740 - -0.1 198,740 - -0.1 198,740 - -0.2 198,789 + -0.1 198,833 - +0.1 198,833 - +0.3 198,868 + -0.0 199,093 + Atu3189 0.34 -0.2 199,093 + Atu3189 0.34 +0.2 199,093 + Atu3189 0.34 +0.7 199,160 + Atu3189 0.43 -1.7 199,236 + Atu3189 0.53 -0.1 199,267 - Atu3189 0.58 -0.0 199,268 - Atu3189 0.58 +0.2 199,369 + Atu3189 0.71 +0.0 199,376 - Atu3189 0.72 -0.2 199,377 - Atu3189 0.72 -0.6 199,387 - Atu3189 0.74 -0.9 199,412 + Atu3189 0.77 +0.0 199,451 + Atu3189 0.82 +1.5 199,459 - Atu3189 0.83 -0.2 199,569 + -0.5
Or see this region's nucleotide sequence