Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04115 and BWI76_RS04120 overlap by 4 nucleotides BWI76_RS04120 and BWI76_RS04125 are separated by 145 nucleotides
BWI76_RS04115: BWI76_RS04115 - patatin family protein, at 845,881 to 846,954
_RS04115
BWI76_RS04120: BWI76_RS04120 - metal-dependent hydrolase, at 846,951 to 847,730
_RS04120
BWI76_RS04125: BWI76_RS04125 - NupC/NupG family nucleoside CNT transporter, at 847,876 to 849,153
_RS04125
Position (kb) 846
847
848 Strain fitness (log2 ratio) -1
0
1
2 at 845.951 kb on + strand at 845.959 kb on - strand at 845.959 kb on - strand at 845.964 kb on - strand at 845.971 kb on + strand at 845.980 kb on - strand at 846.420 kb on - strand, within BWI76_RS04115 at 846.514 kb on + strand, within BWI76_RS04115 at 846.519 kb on + strand, within BWI76_RS04115 at 846.521 kb on + strand, within BWI76_RS04115 at 846.527 kb on - strand, within BWI76_RS04115 at 846.633 kb on - strand, within BWI76_RS04115 at 846.711 kb on - strand, within BWI76_RS04115 at 846.711 kb on - strand, within BWI76_RS04115 at 846.746 kb on - strand, within BWI76_RS04115 at 847.035 kb on + strand, within BWI76_RS04120 at 847.188 kb on - strand, within BWI76_RS04120 at 847.211 kb on + strand, within BWI76_RS04120 at 847.559 kb on + strand, within BWI76_RS04120 at 847.575 kb on - strand, within BWI76_RS04120 at 847.615 kb on + strand, within BWI76_RS04120 at 847.615 kb on + strand at 847.840 kb on + strand at 847.840 kb on + strand at 847.840 kb on + strand at 847.848 kb on - strand at 848.038 kb on - strand, within BWI76_RS04125 at 848.161 kb on + strand, within BWI76_RS04125 at 848.199 kb on - strand, within BWI76_RS04125 at 848.307 kb on - strand, within BWI76_RS04125 at 848.307 kb on - strand, within BWI76_RS04125 at 848.379 kb on + strand, within BWI76_RS04125 at 848.411 kb on - strand, within BWI76_RS04125 at 848.413 kb on + strand, within BWI76_RS04125 at 848.413 kb on + strand, within BWI76_RS04125 at 848.442 kb on + strand, within BWI76_RS04125 at 848.525 kb on - strand, within BWI76_RS04125 at 848.553 kb on + strand, within BWI76_RS04125
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 845,951 + +0.1 845,959 - -0.7 845,959 - -0.5 845,964 - +0.8 845,971 + +0.7 845,980 - -1.2 846,420 - BWI76_RS04115 0.50 -0.5 846,514 + BWI76_RS04115 0.59 -0.2 846,519 + BWI76_RS04115 0.59 +1.7 846,521 + BWI76_RS04115 0.60 -0.2 846,527 - BWI76_RS04115 0.60 +0.8 846,633 - BWI76_RS04115 0.70 +0.5 846,711 - BWI76_RS04115 0.77 -1.3 846,711 - BWI76_RS04115 0.77 +0.1 846,746 - BWI76_RS04115 0.81 +1.1 847,035 + BWI76_RS04120 0.11 -0.3 847,188 - BWI76_RS04120 0.30 -0.3 847,211 + BWI76_RS04120 0.33 +0.9 847,559 + BWI76_RS04120 0.78 +1.7 847,575 - BWI76_RS04120 0.80 +2.3 847,615 + BWI76_RS04120 0.85 -0.4 847,615 + +2.5 847,840 + +0.5 847,840 + -0.3 847,840 + +0.2 847,848 - -0.4 848,038 - BWI76_RS04125 0.13 -1.6 848,161 + BWI76_RS04125 0.22 +0.0 848,199 - BWI76_RS04125 0.25 +0.2 848,307 - BWI76_RS04125 0.34 +1.5 848,307 - BWI76_RS04125 0.34 +0.3 848,379 + BWI76_RS04125 0.39 -1.3 848,411 - BWI76_RS04125 0.42 -0.2 848,413 + BWI76_RS04125 0.42 -0.5 848,413 + BWI76_RS04125 0.42 -1.0 848,442 + BWI76_RS04125 0.44 +0.4 848,525 - BWI76_RS04125 0.51 +0.1 848,553 + BWI76_RS04125 0.53 +0.7
Or see this region's nucleotide sequence