Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0976c

Experiment: 7H9 with nitrate 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with nitrate 4 mM
1,087,604	+		Rv0975c	0.22	-1.6
1,088,027	+		Rv0975c	0.59	-0.5
1,088,027	+		Rv0975c	0.59	+0.5
1,088,028	-		Rv0975c	0.59	-0.1
1,088,083	+		Rv0975c	0.64	+1.1
1,088,084	-		Rv0975c	0.64	+0.3
1,088,240	+		Rv0975c	0.78	-1.9
1,088,241	-		Rv0975c	0.78	-0.5
1,088,241	-		Rv0975c	0.78	-1.7
1,088,691	+		Rv0976c	0.12	-0.3
1,088,742	+		Rv0976c	0.15	-1.6
1,089,310	+		Rv0976c	0.49	-1.6
1,089,311	-		Rv0976c	0.49	-0.2
1,089,784	+		Rv0976c	0.77	+0.6
1,090,078	+				-0.3
1,090,079	-				-0.3
1,090,093	+				-1.3
1,090,147	+				-0.0
1,090,315	+				-1.3
1,090,315	+				-0.8
1,090,544	+				-0.6
1,090,545	-				-0.5
1,090,545	-				-0.6
1,090,556	+				-2.0
1,090,631	+				+1.0
1,090,631	+				-0.9
1,090,632	-				-0.7
1,090,632	-				-1.0
1,090,632	-				-0.7
1,091,014	-		Rv0977	0.23	-0.5