Experiment: 7H9 with copper (II) chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0594 and Rv0595c are separated by 51 nucleotides Rv0595c and Rv0596c overlap by 4 nucleotides Rv0596c and Rv0597c are separated by 182 nucleotides Rv0597c and Rv0598c are separated by 250 nucleotides Rv0598c and Rv0599c overlap by 4 nucleotides
Rv0594: Rv0594 - Mce-family protein Mce2F, at 693,237 to 694,787
Rv0594
Rv0595c: Rv0595c - Possible toxin VapC4, at 694,839 to 695,231
Rv0595c
Rv0596c: Rv0596c - Possible antitoxin VapB4, at 695,228 to 695,485
Rv0596c
Rv0597c: Rv0597c - Conserved hypothetical protein, at 695,668 to 696,903
Rv0597c
Rv0598c: Rv0598c - Possible toxin VapC27. Contains PIN domain., at 697,154 to 697,567
Rv0598c
Rv0599c: Rv0599c - Possible antitoxin VapB27, at 697,564 to 697,800
Rv0599c
Position (kb) 695
696
697 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 694.675 kb on - strand at 694.700 kb on - strand at 694.700 kb on - strand at 694.700 kb on - strand at 694.700 kb on - strand at 694.720 kb on - strand at 694.848 kb on + strand at 694.986 kb on + strand, within Rv0595c at 694.986 kb on + strand, within Rv0595c at 695.022 kb on + strand, within Rv0595c at 695.050 kb on + strand, within Rv0595c at 695.051 kb on - strand, within Rv0595c at 695.223 kb on + strand at 695.223 kb on + strand at 695.556 kb on - strand at 695.789 kb on + strand at 695.789 kb on + strand at 695.794 kb on + strand, within Rv0597c at 695.794 kb on + strand, within Rv0597c at 695.794 kb on + strand, within Rv0597c at 695.984 kb on - strand, within Rv0597c at 696.326 kb on + strand, within Rv0597c at 696.327 kb on - strand, within Rv0597c at 696.327 kb on - strand, within Rv0597c at 696.327 kb on - strand, within Rv0597c at 696.327 kb on - strand, within Rv0597c at 696.703 kb on + strand, within Rv0597c at 696.914 kb on + strand at 697.270 kb on - strand, within Rv0598c at 697.366 kb on + strand, within Rv0598c at 697.432 kb on - strand, within Rv0598c at 697.708 kb on + strand, within Rv0599c at 697.806 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with copper (II) chloride 0.08 mM remove 694,675 - +0.3 694,700 - -2.1 694,700 - +0.7 694,700 - -0.7 694,700 - -1.2 694,720 - -2.8 694,848 + -0.5 694,986 + Rv0595c 0.37 -2.1 694,986 + Rv0595c 0.37 +0.0 695,022 + Rv0595c 0.47 -0.7 695,050 + Rv0595c 0.54 -0.2 695,051 - Rv0595c 0.54 -1.4 695,223 + -0.6 695,223 + +2.2 695,556 - -0.8 695,789 + -0.4 695,789 + -0.6 695,794 + Rv0597c 0.10 -0.7 695,794 + Rv0597c 0.10 -0.2 695,794 + Rv0597c 0.10 +0.6 695,984 - Rv0597c 0.26 -0.5 696,326 + Rv0597c 0.53 -0.2 696,327 - Rv0597c 0.53 +0.6 696,327 - Rv0597c 0.53 -0.1 696,327 - Rv0597c 0.53 +0.1 696,327 - Rv0597c 0.53 -0.9 696,703 + Rv0597c 0.84 -0.5 696,914 + -1.3 697,270 - Rv0598c 0.28 -0.6 697,366 + Rv0598c 0.51 -0.4 697,432 - Rv0598c 0.67 +0.4 697,708 + Rv0599c 0.61 +0.8 697,806 + +0.0
Or see this region's nucleotide sequence