Strain Fitness in Escherichia coli BL21 around ECD_02526

Experiment: Bas51

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02525 and ECD_02526 are separated by 667 nucleotidesECD_02526 and ECD_02527 are separated by 36 nucleotidesECD_02527 and ECD_02528 are separated by 151 nucleotides ECD_02525: ECD_02525 - DNA binding protein, nucleoid-associated, at 2,637,951 to 2,638,355 _02525 ECD_02526: ECD_02526 - alanine exporter, alanine-inducible, stress-responsive, at 2,639,023 to 2,639,472 _02526 ECD_02527: ECD_02527 - uncharacterized protein, at 2,639,509 to 2,639,853 _02527 ECD_02528: ECD_02528 - putative membrane-anchored DUF883 family ribosome-binding protein, at 2,640,005 to 2,640,334 _02528 Position (kb) 2639 2640Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 2638.122 kb on - strand, within ECD_02525at 2638.125 kb on - strand, within ECD_02525at 2638.132 kb on - strand, within ECD_02525at 2638.717 kb on + strandat 2638.718 kb on - strandat 2638.738 kb on - strandat 2638.738 kb on - strandat 2638.738 kb on - strandat 2638.746 kb on - strandat 2638.846 kb on - strandat 2638.870 kb on - strandat 2638.935 kb on + strandat 2638.935 kb on + strandat 2638.935 kb on + strandat 2638.935 kb on + strandat 2638.935 kb on + strandat 2638.936 kb on - strandat 2638.987 kb on + strandat 2639.006 kb on + strandat 2639.006 kb on + strandat 2639.007 kb on - strandat 2639.009 kb on + strandat 2639.010 kb on - strandat 2639.019 kb on + strandat 2639.019 kb on + strandat 2639.019 kb on + strandat 2639.019 kb on + strandat 2639.064 kb on + strandat 2639.064 kb on + strandat 2639.064 kb on + strandat 2639.064 kb on + strandat 2639.065 kb on - strandat 2639.065 kb on - strandat 2639.083 kb on + strand, within ECD_02526at 2639.083 kb on + strand, within ECD_02526at 2639.083 kb on + strand, within ECD_02526at 2639.084 kb on - strand, within ECD_02526at 2639.106 kb on + strand, within ECD_02526at 2639.106 kb on + strand, within ECD_02526at 2639.106 kb on + strand, within ECD_02526at 2639.107 kb on - strand, within ECD_02526at 2639.107 kb on - strand, within ECD_02526at 2639.107 kb on - strand, within ECD_02526at 2639.107 kb on - strand, within ECD_02526at 2639.183 kb on + strand, within ECD_02526at 2639.183 kb on + strand, within ECD_02526at 2639.183 kb on + strand, within ECD_02526at 2639.183 kb on + strand, within ECD_02526at 2639.183 kb on + strand, within ECD_02526at 2639.184 kb on - strand, within ECD_02526at 2639.184 kb on - strand, within ECD_02526at 2639.202 kb on + strand, within ECD_02526at 2639.202 kb on + strand, within ECD_02526at 2639.202 kb on + strand, within ECD_02526at 2639.202 kb on + strand, within ECD_02526at 2639.202 kb on + strand, within ECD_02526at 2639.202 kb on + strand, within ECD_02526at 2639.202 kb on + strand, within ECD_02526at 2639.202 kb on + strand, within ECD_02526at 2639.206 kb on + strand, within ECD_02526at 2639.206 kb on + strand, within ECD_02526at 2639.206 kb on + strand, within ECD_02526at 2639.206 kb on + strand, within ECD_02526at 2639.206 kb on + strand, within ECD_02526at 2639.207 kb on - strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.285 kb on - strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.309 kb on - strand, within ECD_02526at 2639.309 kb on - strand, within ECD_02526at 2639.309 kb on - strand, within ECD_02526at 2639.309 kb on - strand, within ECD_02526at 2639.324 kb on + strand, within ECD_02526at 2639.352 kb on + strand, within ECD_02526at 2639.410 kb on + strand, within ECD_02526at 2639.410 kb on + strand, within ECD_02526at 2639.410 kb on + strand, within ECD_02526at 2639.410 kb on + strand, within ECD_02526at 2639.439 kb on + strandat 2639.462 kb on + strandat 2639.462 kb on + strandat 2639.527 kb on + strandat 2639.528 kb on - strandat 2639.540 kb on + strandat 2639.565 kb on + strand, within ECD_02527at 2639.565 kb on + strand, within ECD_02527at 2639.565 kb on + strand, within ECD_02527at 2639.565 kb on + strand, within ECD_02527at 2639.566 kb on - strand, within ECD_02527at 2639.566 kb on - strand, within ECD_02527at 2639.566 kb on - strand, within ECD_02527at 2639.586 kb on - strand, within ECD_02527at 2639.609 kb on - strand, within ECD_02527at 2639.613 kb on - strand, within ECD_02527at 2639.613 kb on - strand, within ECD_02527at 2639.689 kb on + strand, within ECD_02527at 2639.690 kb on - strand, within ECD_02527at 2639.690 kb on - strand, within ECD_02527at 2639.690 kb on - strand, within ECD_02527at 2639.716 kb on - strand, within ECD_02527at 2639.744 kb on + strand, within ECD_02527at 2639.744 kb on + strand, within ECD_02527at 2639.744 kb on + strand, within ECD_02527at 2639.745 kb on - strand, within ECD_02527at 2639.745 kb on - strand, within ECD_02527at 2639.745 kb on - strand, within ECD_02527at 2639.745 kb on - strand, within ECD_02527at 2639.745 kb on - strand, within ECD_02527at 2639.745 kb on - strand, within ECD_02527at 2639.750 kb on + strand, within ECD_02527at 2639.751 kb on - strand, within ECD_02527at 2639.774 kb on + strand, within ECD_02527at 2639.774 kb on + strand, within ECD_02527at 2639.788 kb on + strand, within ECD_02527at 2639.803 kb on - strand, within ECD_02527at 2639.803 kb on - strand, within ECD_02527at 2639.821 kb on + strandat 2639.821 kb on + strandat 2639.845 kb on + strandat 2639.846 kb on - strandat 2639.846 kb on - strandat 2639.849 kb on + strandat 2639.849 kb on + strandat 2639.849 kb on + strandat 2639.849 kb on + strandat 2639.849 kb on + strandat 2639.850 kb on - strandat 2639.850 kb on - strandat 2639.850 kb on - strandat 2639.850 kb on - strandat 2639.850 kb on - strandat 2639.850 kb on - strandat 2639.850 kb on - strandat 2639.850 kb on - strandat 2639.850 kb on - strandat 2639.850 kb on - strandat 2639.853 kb on + strandat 2639.853 kb on + strandat 2639.854 kb on - strandat 2639.854 kb on - strandat 2639.870 kb on + strandat 2639.870 kb on + strandat 2639.871 kb on - strandat 2639.871 kb on - strandat 2639.871 kb on - strandat 2639.885 kb on + strandat 2639.886 kb on - strandat 2639.886 kb on - strandat 2639.889 kb on + strandat 2639.890 kb on + strandat 2639.890 kb on + strandat 2639.891 kb on - strandat 2639.967 kb on + strandat 2639.979 kb on + strandat 2640.004 kb on + strandat 2640.004 kb on + strandat 2640.004 kb on + strandat 2640.004 kb on + strandat 2640.004 kb on + strandat 2640.004 kb on + strandat 2640.004 kb on + strandat 2640.004 kb on + strandat 2640.004 kb on + strandat 2640.005 kb on - strandat 2640.075 kb on + strand, within ECD_02528at 2640.075 kb on + strand, within ECD_02528at 2640.075 kb on + strand, within ECD_02528at 2640.096 kb on + strand, within ECD_02528at 2640.096 kb on + strand, within ECD_02528at 2640.148 kb on + strand, within ECD_02528at 2640.149 kb on - strand, within ECD_02528at 2640.149 kb on - strand, within ECD_02528at 2640.196 kb on + strand, within ECD_02528at 2640.196 kb on + strand, within ECD_02528at 2640.268 kb on + strand, within ECD_02528at 2640.269 kb on - strand, within ECD_02528at 2640.269 kb on - strand, within ECD_02528at 2640.295 kb on + strand, within ECD_02528at 2640.296 kb on - strand, within ECD_02528at 2640.296 kb on - strand, within ECD_02528at 2640.296 kb on - strand, within ECD_02528at 2640.315 kb on + strandat 2640.316 kb on - strandat 2640.316 kb on - strandat 2640.349 kb on + strandat 2640.349 kb on + strandat 2640.349 kb on + strandat 2640.349 kb on + strandat 2640.350 kb on - strandat 2640.353 kb on + strandat 2640.469 kb on - strandat 2640.471 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas51
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2,638,122 - ECD_02525 0.42 +0.3
2,638,125 - ECD_02525 0.43 -0.3
2,638,132 - ECD_02525 0.45 +1.3
2,638,717 + -0.9
2,638,718 - -0.3
2,638,738 - -0.7
2,638,738 - +1.5
2,638,738 - -0.7
2,638,746 - +0.7
2,638,846 - -0.0
2,638,870 - +0.9
2,638,935 + +0.7
2,638,935 + +0.1
2,638,935 + -1.1
2,638,935 + -2.1
2,638,935 + +0.5
2,638,936 - +0.5
2,638,987 + -1.0
2,639,006 + -0.1
2,639,006 + +0.1
2,639,007 - +0.3
2,639,009 + +1.5
2,639,010 - +2.0
2,639,019 + +0.9
2,639,019 + +3.1
2,639,019 + -1.8
2,639,019 + -2.3
2,639,064 + +0.5
2,639,064 + +0.2
2,639,064 + -0.2
2,639,064 + +0.8
2,639,065 - +1.5
2,639,065 - +2.8
2,639,083 + ECD_02526 0.13 +0.3
2,639,083 + ECD_02526 0.13 -0.9
2,639,083 + ECD_02526 0.13 -0.8
2,639,084 - ECD_02526 0.14 -0.1
2,639,106 + ECD_02526 0.18 -0.6
2,639,106 + ECD_02526 0.18 +3.0
2,639,106 + ECD_02526 0.18 +0.3
2,639,107 - ECD_02526 0.19 +1.5
2,639,107 - ECD_02526 0.19 -0.4
2,639,107 - ECD_02526 0.19 +4.7
2,639,107 - ECD_02526 0.19 -1.3
2,639,183 + ECD_02526 0.36 +0.5
2,639,183 + ECD_02526 0.36 -0.8
2,639,183 + ECD_02526 0.36 +0.0
2,639,183 + ECD_02526 0.36 -0.5
2,639,183 + ECD_02526 0.36 +0.8
2,639,184 - ECD_02526 0.36 -0.9
2,639,184 - ECD_02526 0.36 +1.1
2,639,202 + ECD_02526 0.40 -0.6
2,639,202 + ECD_02526 0.40 -1.4
2,639,202 + ECD_02526 0.40 -0.2
2,639,202 + ECD_02526 0.40 +1.1
2,639,202 + ECD_02526 0.40 +0.2
2,639,202 + ECD_02526 0.40 +0.3
2,639,202 + ECD_02526 0.40 -0.0
2,639,202 + ECD_02526 0.40 +0.3
2,639,206 + ECD_02526 0.41 +0.1
2,639,206 + ECD_02526 0.41 -0.5
2,639,206 + ECD_02526 0.41 -1.3
2,639,206 + ECD_02526 0.41 +4.9
2,639,206 + ECD_02526 0.41 +1.1
2,639,207 - ECD_02526 0.41 -1.1
2,639,284 + ECD_02526 0.58 +1.3
2,639,284 + ECD_02526 0.58 -0.5
2,639,284 + ECD_02526 0.58 -0.0
2,639,284 + ECD_02526 0.58 -0.7
2,639,284 + ECD_02526 0.58 -0.5
2,639,284 + ECD_02526 0.58 +4.9
2,639,284 + ECD_02526 0.58 -0.6
2,639,284 + ECD_02526 0.58 -0.8
2,639,284 + ECD_02526 0.58 +4.6
2,639,284 + ECD_02526 0.58 +2.4
2,639,285 - ECD_02526 0.58 -0.6
2,639,308 + ECD_02526 0.63 -0.2
2,639,308 + ECD_02526 0.63 -1.1
2,639,308 + ECD_02526 0.63 -1.5
2,639,308 + ECD_02526 0.63 +0.2
2,639,308 + ECD_02526 0.63 +0.4
2,639,308 + ECD_02526 0.63 -0.8
2,639,308 + ECD_02526 0.63 +2.6
2,639,308 + ECD_02526 0.63 -1.8
2,639,308 + ECD_02526 0.63 +0.6
2,639,308 + ECD_02526 0.63 +0.5
2,639,309 - ECD_02526 0.64 +0.8
2,639,309 - ECD_02526 0.64 -1.8
2,639,309 - ECD_02526 0.64 +0.5
2,639,309 - ECD_02526 0.64 -0.7
2,639,324 + ECD_02526 0.67 +4.3
2,639,352 + ECD_02526 0.73 -1.4
2,639,410 + ECD_02526 0.86 +1.1
2,639,410 + ECD_02526 0.86 -0.9
2,639,410 + ECD_02526 0.86 -0.1
2,639,410 + ECD_02526 0.86 -0.1
2,639,439 + +0.4
2,639,462 + -0.9
2,639,462 + +0.7
2,639,527 + -1.4
2,639,528 - +0.5
2,639,540 + -0.5
2,639,565 + ECD_02527 0.16 -0.5
2,639,565 + ECD_02527 0.16 +0.0
2,639,565 + ECD_02527 0.16 +1.0
2,639,565 + ECD_02527 0.16 -0.2
2,639,566 - ECD_02527 0.17 -0.8
2,639,566 - ECD_02527 0.17 -1.6
2,639,566 - ECD_02527 0.17 -0.2
2,639,586 - ECD_02527 0.22 -0.4
2,639,609 - ECD_02527 0.29 -0.2
2,639,613 - ECD_02527 0.30 -0.0
2,639,613 - ECD_02527 0.30 +1.5
2,639,689 + ECD_02527 0.52 -0.0
2,639,690 - ECD_02527 0.52 +0.1
2,639,690 - ECD_02527 0.52 +1.7
2,639,690 - ECD_02527 0.52 +1.3
2,639,716 - ECD_02527 0.60 -0.5
2,639,744 + ECD_02527 0.68 -0.3
2,639,744 + ECD_02527 0.68 -0.9
2,639,744 + ECD_02527 0.68 -2.1
2,639,745 - ECD_02527 0.68 +0.1
2,639,745 - ECD_02527 0.68 +0.9
2,639,745 - ECD_02527 0.68 +2.1
2,639,745 - ECD_02527 0.68 +1.3
2,639,745 - ECD_02527 0.68 +0.5
2,639,745 - ECD_02527 0.68 -0.5
2,639,750 + ECD_02527 0.70 -0.3
2,639,751 - ECD_02527 0.70 -1.1
2,639,774 + ECD_02527 0.77 +0.2
2,639,774 + ECD_02527 0.77 +0.9
2,639,788 + ECD_02527 0.81 +0.2
2,639,803 - ECD_02527 0.85 +1.3
2,639,803 - ECD_02527 0.85 +0.5
2,639,821 + -0.3
2,639,821 + +0.0
2,639,845 + -1.1
2,639,846 - -0.6
2,639,846 - -0.5
2,639,849 + -0.8
2,639,849 + +0.3
2,639,849 + +0.9
2,639,849 + -1.5
2,639,849 + +0.2
2,639,850 - +0.5
2,639,850 - -0.6
2,639,850 - -0.4
2,639,850 - -1.5
2,639,850 - -1.2
2,639,850 - -1.0
2,639,850 - +5.5
2,639,850 - -1.0
2,639,850 - +0.0
2,639,850 - +0.6
2,639,853 + +0.1
2,639,853 + +0.9
2,639,854 - +1.0
2,639,854 - +0.1
2,639,870 + -0.2
2,639,870 + -0.2
2,639,871 - -0.4
2,639,871 - -1.4
2,639,871 - +4.4
2,639,885 + +0.5
2,639,886 - -0.9
2,639,886 - -1.8
2,639,889 + -0.4
2,639,890 + +0.0
2,639,890 + +0.5
2,639,891 - -1.2
2,639,967 + -0.6
2,639,979 + +0.5
2,640,004 + -0.5
2,640,004 + -2.2
2,640,004 + -0.6
2,640,004 + -0.0
2,640,004 + -0.2
2,640,004 + +0.4
2,640,004 + +0.2
2,640,004 + -0.3
2,640,004 + -0.4
2,640,005 - -3.2
2,640,075 + ECD_02528 0.21 -1.7
2,640,075 + ECD_02528 0.21 -0.1
2,640,075 + ECD_02528 0.21 +0.1
2,640,096 + ECD_02528 0.28 -1.2
2,640,096 + ECD_02528 0.28 -1.8
2,640,148 + ECD_02528 0.43 +0.8
2,640,149 - ECD_02528 0.44 -1.4
2,640,149 - ECD_02528 0.44 +1.0
2,640,196 + ECD_02528 0.58 +4.2
2,640,196 + ECD_02528 0.58 -0.3
2,640,268 + ECD_02528 0.80 -0.1
2,640,269 - ECD_02528 0.80 -0.1
2,640,269 - ECD_02528 0.80 -0.9
2,640,295 + ECD_02528 0.88 +0.5
2,640,296 - ECD_02528 0.88 -1.5
2,640,296 - ECD_02528 0.88 -0.0
2,640,296 - ECD_02528 0.88 +0.5
2,640,315 + -0.1
2,640,316 - -0.8
2,640,316 - +0.2
2,640,349 + -1.2
2,640,349 + +2.1
2,640,349 + +0.0
2,640,349 + +0.1
2,640,350 - -0.2
2,640,353 + -0.9
2,640,469 - -0.4
2,640,471 - +0.2

Or see this region's nucleotide sequence