Experiment: Bas51
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02525 and ECD_02526 are separated by 667 nucleotides ECD_02526 and ECD_02527 are separated by 36 nucleotides ECD_02527 and ECD_02528 are separated by 151 nucleotides
ECD_02525: ECD_02525 - DNA binding protein, nucleoid-associated, at 2,637,951 to 2,638,355
_02525
ECD_02526: ECD_02526 - alanine exporter, alanine-inducible, stress-responsive, at 2,639,023 to 2,639,472
_02526
ECD_02527: ECD_02527 - uncharacterized protein, at 2,639,509 to 2,639,853
_02527
ECD_02528: ECD_02528 - putative membrane-anchored DUF883 family ribosome-binding protein, at 2,640,005 to 2,640,334
_02528
Position (kb)
2639
2640 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 2638.122 kb on - strand, within ECD_02525 at 2638.125 kb on - strand, within ECD_02525 at 2638.132 kb on - strand, within ECD_02525 at 2638.717 kb on + strand at 2638.718 kb on - strand at 2638.738 kb on - strand at 2638.738 kb on - strand at 2638.738 kb on - strand at 2638.746 kb on - strand at 2638.846 kb on - strand at 2638.870 kb on - strand at 2638.935 kb on + strand at 2638.935 kb on + strand at 2638.935 kb on + strand at 2638.935 kb on + strand at 2638.935 kb on + strand at 2638.936 kb on - strand at 2638.987 kb on + strand at 2639.006 kb on + strand at 2639.006 kb on + strand at 2639.007 kb on - strand at 2639.009 kb on + strand at 2639.010 kb on - strand at 2639.019 kb on + strand at 2639.019 kb on + strand at 2639.019 kb on + strand at 2639.019 kb on + strand at 2639.064 kb on + strand at 2639.064 kb on + strand at 2639.064 kb on + strand at 2639.064 kb on + strand at 2639.065 kb on - strand at 2639.065 kb on - strand at 2639.083 kb on + strand, within ECD_02526 at 2639.083 kb on + strand, within ECD_02526 at 2639.083 kb on + strand, within ECD_02526 at 2639.084 kb on - strand, within ECD_02526 at 2639.106 kb on + strand, within ECD_02526 at 2639.106 kb on + strand, within ECD_02526 at 2639.106 kb on + strand, within ECD_02526 at 2639.107 kb on - strand, within ECD_02526 at 2639.107 kb on - strand, within ECD_02526 at 2639.107 kb on - strand, within ECD_02526 at 2639.107 kb on - strand, within ECD_02526 at 2639.183 kb on + strand, within ECD_02526 at 2639.183 kb on + strand, within ECD_02526 at 2639.183 kb on + strand, within ECD_02526 at 2639.183 kb on + strand, within ECD_02526 at 2639.183 kb on + strand, within ECD_02526 at 2639.184 kb on - strand, within ECD_02526 at 2639.184 kb on - strand, within ECD_02526 at 2639.202 kb on + strand, within ECD_02526 at 2639.202 kb on + strand, within ECD_02526 at 2639.202 kb on + strand, within ECD_02526 at 2639.202 kb on + strand, within ECD_02526 at 2639.202 kb on + strand, within ECD_02526 at 2639.202 kb on + strand, within ECD_02526 at 2639.202 kb on + strand, within ECD_02526 at 2639.202 kb on + strand, within ECD_02526 at 2639.206 kb on + strand, within ECD_02526 at 2639.206 kb on + strand, within ECD_02526 at 2639.206 kb on + strand, within ECD_02526 at 2639.206 kb on + strand, within ECD_02526 at 2639.206 kb on + strand, within ECD_02526 at 2639.207 kb on - strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.285 kb on - strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.309 kb on - strand, within ECD_02526 at 2639.309 kb on - strand, within ECD_02526 at 2639.309 kb on - strand, within ECD_02526 at 2639.309 kb on - strand, within ECD_02526 at 2639.324 kb on + strand, within ECD_02526 at 2639.352 kb on + strand, within ECD_02526 at 2639.410 kb on + strand, within ECD_02526 at 2639.410 kb on + strand, within ECD_02526 at 2639.410 kb on + strand, within ECD_02526 at 2639.410 kb on + strand, within ECD_02526 at 2639.439 kb on + strand at 2639.462 kb on + strand at 2639.462 kb on + strand at 2639.527 kb on + strand at 2639.528 kb on - strand at 2639.540 kb on + strand at 2639.565 kb on + strand, within ECD_02527 at 2639.565 kb on + strand, within ECD_02527 at 2639.565 kb on + strand, within ECD_02527 at 2639.565 kb on + strand, within ECD_02527 at 2639.566 kb on - strand, within ECD_02527 at 2639.566 kb on - strand, within ECD_02527 at 2639.566 kb on - strand, within ECD_02527 at 2639.586 kb on - strand, within ECD_02527 at 2639.609 kb on - strand, within ECD_02527 at 2639.613 kb on - strand, within ECD_02527 at 2639.613 kb on - strand, within ECD_02527 at 2639.689 kb on + strand, within ECD_02527 at 2639.690 kb on - strand, within ECD_02527 at 2639.690 kb on - strand, within ECD_02527 at 2639.690 kb on - strand, within ECD_02527 at 2639.716 kb on - strand, within ECD_02527 at 2639.744 kb on + strand, within ECD_02527 at 2639.744 kb on + strand, within ECD_02527 at 2639.744 kb on + strand, within ECD_02527 at 2639.745 kb on - strand, within ECD_02527 at 2639.745 kb on - strand, within ECD_02527 at 2639.745 kb on - strand, within ECD_02527 at 2639.745 kb on - strand, within ECD_02527 at 2639.745 kb on - strand, within ECD_02527 at 2639.745 kb on - strand, within ECD_02527 at 2639.750 kb on + strand, within ECD_02527 at 2639.751 kb on - strand, within ECD_02527 at 2639.774 kb on + strand, within ECD_02527 at 2639.774 kb on + strand, within ECD_02527 at 2639.788 kb on + strand, within ECD_02527 at 2639.803 kb on - strand, within ECD_02527 at 2639.803 kb on - strand, within ECD_02527 at 2639.821 kb on + strand at 2639.821 kb on + strand at 2639.845 kb on + strand at 2639.846 kb on - strand at 2639.846 kb on - strand at 2639.849 kb on + strand at 2639.849 kb on + strand at 2639.849 kb on + strand at 2639.849 kb on + strand at 2639.849 kb on + strand at 2639.850 kb on - strand at 2639.850 kb on - strand at 2639.850 kb on - strand at 2639.850 kb on - strand at 2639.850 kb on - strand at 2639.850 kb on - strand at 2639.850 kb on - strand at 2639.850 kb on - strand at 2639.850 kb on - strand at 2639.850 kb on - strand at 2639.853 kb on + strand at 2639.853 kb on + strand at 2639.854 kb on - strand at 2639.854 kb on - strand at 2639.870 kb on + strand at 2639.870 kb on + strand at 2639.871 kb on - strand at 2639.871 kb on - strand at 2639.871 kb on - strand at 2639.885 kb on + strand at 2639.886 kb on - strand at 2639.886 kb on - strand at 2639.889 kb on + strand at 2639.890 kb on + strand at 2639.890 kb on + strand at 2639.891 kb on - strand at 2639.967 kb on + strand at 2639.979 kb on + strand at 2640.004 kb on + strand at 2640.004 kb on + strand at 2640.004 kb on + strand at 2640.004 kb on + strand at 2640.004 kb on + strand at 2640.004 kb on + strand at 2640.004 kb on + strand at 2640.004 kb on + strand at 2640.004 kb on + strand at 2640.005 kb on - strand at 2640.075 kb on + strand, within ECD_02528 at 2640.075 kb on + strand, within ECD_02528 at 2640.075 kb on + strand, within ECD_02528 at 2640.096 kb on + strand, within ECD_02528 at 2640.096 kb on + strand, within ECD_02528 at 2640.148 kb on + strand, within ECD_02528 at 2640.149 kb on - strand, within ECD_02528 at 2640.149 kb on - strand, within ECD_02528 at 2640.196 kb on + strand, within ECD_02528 at 2640.196 kb on + strand, within ECD_02528 at 2640.268 kb on + strand, within ECD_02528 at 2640.269 kb on - strand, within ECD_02528 at 2640.269 kb on - strand, within ECD_02528 at 2640.295 kb on + strand, within ECD_02528 at 2640.296 kb on - strand, within ECD_02528 at 2640.296 kb on - strand, within ECD_02528 at 2640.296 kb on - strand, within ECD_02528 at 2640.315 kb on + strand at 2640.316 kb on - strand at 2640.316 kb on - strand at 2640.349 kb on + strand at 2640.349 kb on + strand at 2640.349 kb on + strand at 2640.349 kb on + strand at 2640.350 kb on - strand at 2640.353 kb on + strand at 2640.469 kb on - strand at 2640.471 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas51 remove 2,638,122 - ECD_02525 0.42 +0.3 2,638,125 - ECD_02525 0.43 -0.3 2,638,132 - ECD_02525 0.45 +1.3 2,638,717 + -0.9 2,638,718 - -0.3 2,638,738 - -0.7 2,638,738 - +1.5 2,638,738 - -0.7 2,638,746 - +0.7 2,638,846 - -0.0 2,638,870 - +0.9 2,638,935 + +0.7 2,638,935 + +0.1 2,638,935 + -1.1 2,638,935 + -2.1 2,638,935 + +0.5 2,638,936 - +0.5 2,638,987 + -1.0 2,639,006 + -0.1 2,639,006 + +0.1 2,639,007 - +0.3 2,639,009 + +1.5 2,639,010 - +2.0 2,639,019 + +0.9 2,639,019 + +3.1 2,639,019 + -1.8 2,639,019 + -2.3 2,639,064 + +0.5 2,639,064 + +0.2 2,639,064 + -0.2 2,639,064 + +0.8 2,639,065 - +1.5 2,639,065 - +2.8 2,639,083 + ECD_02526 0.13 +0.3 2,639,083 + ECD_02526 0.13 -0.9 2,639,083 + ECD_02526 0.13 -0.8 2,639,084 - ECD_02526 0.14 -0.1 2,639,106 + ECD_02526 0.18 -0.6 2,639,106 + ECD_02526 0.18 +3.0 2,639,106 + ECD_02526 0.18 +0.3 2,639,107 - ECD_02526 0.19 +1.5 2,639,107 - ECD_02526 0.19 -0.4 2,639,107 - ECD_02526 0.19 +4.7 2,639,107 - ECD_02526 0.19 -1.3 2,639,183 + ECD_02526 0.36 +0.5 2,639,183 + ECD_02526 0.36 -0.8 2,639,183 + ECD_02526 0.36 +0.0 2,639,183 + ECD_02526 0.36 -0.5 2,639,183 + ECD_02526 0.36 +0.8 2,639,184 - ECD_02526 0.36 -0.9 2,639,184 - ECD_02526 0.36 +1.1 2,639,202 + ECD_02526 0.40 -0.6 2,639,202 + ECD_02526 0.40 -1.4 2,639,202 + ECD_02526 0.40 -0.2 2,639,202 + ECD_02526 0.40 +1.1 2,639,202 + ECD_02526 0.40 +0.2 2,639,202 + ECD_02526 0.40 +0.3 2,639,202 + ECD_02526 0.40 -0.0 2,639,202 + ECD_02526 0.40 +0.3 2,639,206 + ECD_02526 0.41 +0.1 2,639,206 + ECD_02526 0.41 -0.5 2,639,206 + ECD_02526 0.41 -1.3 2,639,206 + ECD_02526 0.41 +4.9 2,639,206 + ECD_02526 0.41 +1.1 2,639,207 - ECD_02526 0.41 -1.1 2,639,284 + ECD_02526 0.58 +1.3 2,639,284 + ECD_02526 0.58 -0.5 2,639,284 + ECD_02526 0.58 -0.0 2,639,284 + ECD_02526 0.58 -0.7 2,639,284 + ECD_02526 0.58 -0.5 2,639,284 + ECD_02526 0.58 +4.9 2,639,284 + ECD_02526 0.58 -0.6 2,639,284 + ECD_02526 0.58 -0.8 2,639,284 + ECD_02526 0.58 +4.6 2,639,284 + ECD_02526 0.58 +2.4 2,639,285 - ECD_02526 0.58 -0.6 2,639,308 + ECD_02526 0.63 -0.2 2,639,308 + ECD_02526 0.63 -1.1 2,639,308 + ECD_02526 0.63 -1.5 2,639,308 + ECD_02526 0.63 +0.2 2,639,308 + ECD_02526 0.63 +0.4 2,639,308 + ECD_02526 0.63 -0.8 2,639,308 + ECD_02526 0.63 +2.6 2,639,308 + ECD_02526 0.63 -1.8 2,639,308 + ECD_02526 0.63 +0.6 2,639,308 + ECD_02526 0.63 +0.5 2,639,309 - ECD_02526 0.64 +0.8 2,639,309 - ECD_02526 0.64 -1.8 2,639,309 - ECD_02526 0.64 +0.5 2,639,309 - ECD_02526 0.64 -0.7 2,639,324 + ECD_02526 0.67 +4.3 2,639,352 + ECD_02526 0.73 -1.4 2,639,410 + ECD_02526 0.86 +1.1 2,639,410 + ECD_02526 0.86 -0.9 2,639,410 + ECD_02526 0.86 -0.1 2,639,410 + ECD_02526 0.86 -0.1 2,639,439 + +0.4 2,639,462 + -0.9 2,639,462 + +0.7 2,639,527 + -1.4 2,639,528 - +0.5 2,639,540 + -0.5 2,639,565 + ECD_02527 0.16 -0.5 2,639,565 + ECD_02527 0.16 +0.0 2,639,565 + ECD_02527 0.16 +1.0 2,639,565 + ECD_02527 0.16 -0.2 2,639,566 - ECD_02527 0.17 -0.8 2,639,566 - ECD_02527 0.17 -1.6 2,639,566 - ECD_02527 0.17 -0.2 2,639,586 - ECD_02527 0.22 -0.4 2,639,609 - ECD_02527 0.29 -0.2 2,639,613 - ECD_02527 0.30 -0.0 2,639,613 - ECD_02527 0.30 +1.5 2,639,689 + ECD_02527 0.52 -0.0 2,639,690 - ECD_02527 0.52 +0.1 2,639,690 - ECD_02527 0.52 +1.7 2,639,690 - ECD_02527 0.52 +1.3 2,639,716 - ECD_02527 0.60 -0.5 2,639,744 + ECD_02527 0.68 -0.3 2,639,744 + ECD_02527 0.68 -0.9 2,639,744 + ECD_02527 0.68 -2.1 2,639,745 - ECD_02527 0.68 +0.1 2,639,745 - ECD_02527 0.68 +0.9 2,639,745 - ECD_02527 0.68 +2.1 2,639,745 - ECD_02527 0.68 +1.3 2,639,745 - ECD_02527 0.68 +0.5 2,639,745 - ECD_02527 0.68 -0.5 2,639,750 + ECD_02527 0.70 -0.3 2,639,751 - ECD_02527 0.70 -1.1 2,639,774 + ECD_02527 0.77 +0.2 2,639,774 + ECD_02527 0.77 +0.9 2,639,788 + ECD_02527 0.81 +0.2 2,639,803 - ECD_02527 0.85 +1.3 2,639,803 - ECD_02527 0.85 +0.5 2,639,821 + -0.3 2,639,821 + +0.0 2,639,845 + -1.1 2,639,846 - -0.6 2,639,846 - -0.5 2,639,849 + -0.8 2,639,849 + +0.3 2,639,849 + +0.9 2,639,849 + -1.5 2,639,849 + +0.2 2,639,850 - +0.5 2,639,850 - -0.6 2,639,850 - -0.4 2,639,850 - -1.5 2,639,850 - -1.2 2,639,850 - -1.0 2,639,850 - +5.5 2,639,850 - -1.0 2,639,850 - +0.0 2,639,850 - +0.6 2,639,853 + +0.1 2,639,853 + +0.9 2,639,854 - +1.0 2,639,854 - +0.1 2,639,870 + -0.2 2,639,870 + -0.2 2,639,871 - -0.4 2,639,871 - -1.4 2,639,871 - +4.4 2,639,885 + +0.5 2,639,886 - -0.9 2,639,886 - -1.8 2,639,889 + -0.4 2,639,890 + +0.0 2,639,890 + +0.5 2,639,891 - -1.2 2,639,967 + -0.6 2,639,979 + +0.5 2,640,004 + -0.5 2,640,004 + -2.2 2,640,004 + -0.6 2,640,004 + -0.0 2,640,004 + -0.2 2,640,004 + +0.4 2,640,004 + +0.2 2,640,004 + -0.3 2,640,004 + -0.4 2,640,005 - -3.2 2,640,075 + ECD_02528 0.21 -1.7 2,640,075 + ECD_02528 0.21 -0.1 2,640,075 + ECD_02528 0.21 +0.1 2,640,096 + ECD_02528 0.28 -1.2 2,640,096 + ECD_02528 0.28 -1.8 2,640,148 + ECD_02528 0.43 +0.8 2,640,149 - ECD_02528 0.44 -1.4 2,640,149 - ECD_02528 0.44 +1.0 2,640,196 + ECD_02528 0.58 +4.2 2,640,196 + ECD_02528 0.58 -0.3 2,640,268 + ECD_02528 0.80 -0.1 2,640,269 - ECD_02528 0.80 -0.1 2,640,269 - ECD_02528 0.80 -0.9 2,640,295 + ECD_02528 0.88 +0.5 2,640,296 - ECD_02528 0.88 -1.5 2,640,296 - ECD_02528 0.88 -0.0 2,640,296 - ECD_02528 0.88 +0.5 2,640,315 + -0.1 2,640,316 - -0.8 2,640,316 - +0.2 2,640,349 + -1.2 2,640,349 + +2.1 2,640,349 + +0.0 2,640,349 + +0.1 2,640,350 - -0.2 2,640,353 + -0.9 2,640,469 - -0.4 2,640,471 - +0.2
Or see this region's nucleotide sequence