Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_6002

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
6,818,978	-				-0.4
6,818,998	+				+1.3
6,819,005	+				-2.1
6,819,005	+				+0.3
6,819,006	-				+1.2
6,819,006	-				+1.5
6,819,013	+				-3.2
6,819,135	+		Pf6N2E2_6001	0.18	+3.8
6,819,135	+		Pf6N2E2_6001	0.18	-1.1
6,819,135	+		Pf6N2E2_6001	0.18	+0.4
6,819,135	+		Pf6N2E2_6001	0.18	-0.9
6,819,136	-		Pf6N2E2_6001	0.18	-1.1
6,819,136	-		Pf6N2E2_6001	0.18	-0.4
6,819,186	+		Pf6N2E2_6001	0.24	-0.8
6,819,186	+		Pf6N2E2_6001	0.24	-1.6
6,819,252	+		Pf6N2E2_6001	0.33	-1.6
6,819,252	+		Pf6N2E2_6001	0.33	-2.4
6,819,252	+		Pf6N2E2_6001	0.33	-1.6
6,819,253	-		Pf6N2E2_6001	0.34	+2.0
6,819,523	-		Pf6N2E2_6001	0.70	-0.2
6,819,580	-		Pf6N2E2_6001	0.78	+0.6
6,819,580	-		Pf6N2E2_6001	0.78	-2.7
6,819,630	+		Pf6N2E2_6001	0.85	-0.8
6,819,630	+		Pf6N2E2_6001	0.85	-1.6
6,819,630	+		Pf6N2E2_6001	0.85	+0.5
6,819,630	+		Pf6N2E2_6001	0.85	-2.1
6,819,630	+		Pf6N2E2_6001	0.85	-0.8
6,819,630	+		Pf6N2E2_6001	0.85	+0.2
6,819,630	+		Pf6N2E2_6001	0.85	-2.3
6,819,630	+		Pf6N2E2_6001	0.85	-1.0
6,819,631	-		Pf6N2E2_6001	0.85	+0.3
6,819,631	-		Pf6N2E2_6001	0.85	+0.4
6,819,631	-		Pf6N2E2_6001	0.85	+1.3
6,819,631	-		Pf6N2E2_6001	0.85	-0.5
6,819,633	-		Pf6N2E2_6001	0.85	-3.0
6,819,675	-				-0.0
6,819,675	-				-1.2
6,819,873	+				-0.4
6,819,873	+				-0.0
6,819,874	-				-0.7
6,819,928	+				+1.2
6,819,929	-				+1.8
6,819,929	-				-0.2
6,819,935	+				-2.4
6,819,935	+				+0.5
6,819,935	+				+1.7
6,819,936	-				+0.6
6,819,936	-				-1.4
6,819,936	-				-3.2
6,819,936	-				+0.7
6,819,936	-				+0.6
6,819,936	-				+0.9
6,819,954	+				-1.0
6,819,996	+		Pf6N2E2_6002	0.13	+1.4
6,819,996	+		Pf6N2E2_6002	0.13	+1.9
6,819,997	-		Pf6N2E2_6002	0.13	-0.6
6,819,997	-		Pf6N2E2_6002	0.13	-0.8
6,820,180	-		Pf6N2E2_6002	0.32	+0.4
6,820,180	-		Pf6N2E2_6002	0.32	+0.3
6,820,180	-		Pf6N2E2_6002	0.32	-2.0
6,820,274	+		Pf6N2E2_6002	0.41	-1.9
6,820,389	+		Pf6N2E2_6002	0.53	-1.1
6,820,389	+		Pf6N2E2_6002	0.53	-1.9
6,820,389	+		Pf6N2E2_6002	0.53	-0.5
6,820,390	-		Pf6N2E2_6002	0.53	-0.1
6,820,390	-		Pf6N2E2_6002	0.53	-0.1
6,820,524	+		Pf6N2E2_6002	0.67	-1.8
6,820,525	-		Pf6N2E2_6002	0.67	+2.4
6,820,525	-		Pf6N2E2_6002	0.67	-0.2
6,820,525	-		Pf6N2E2_6002	0.67	-0.8
6,820,544	-		Pf6N2E2_6002	0.69	+0.4
6,820,590	+		Pf6N2E2_6002	0.74	+0.4
6,820,591	-		Pf6N2E2_6002	0.74	-2.2
6,820,600	+		Pf6N2E2_6002	0.75	-0.4
6,820,740	-		Pf6N2E2_6002	0.89	-2.4
6,820,838	-				-0.4
6,820,906	+				-0.5
6,820,906	+				+0.4
6,820,907	-				-1.2
6,820,907	-				-1.4
6,821,066	+		Pf6N2E2_6003	0.12	+0.4
6,821,067	-		Pf6N2E2_6003	0.12	-2.2
6,821,103	+		Pf6N2E2_6003	0.17	-1.2
6,821,103	+		Pf6N2E2_6003	0.17	-1.4
6,821,103	+		Pf6N2E2_6003	0.17	+0.7
6,821,103	+		Pf6N2E2_6003	0.17	-0.8
6,821,103	+		Pf6N2E2_6003	0.17	-0.6
6,821,103	+		Pf6N2E2_6003	0.17	-3.6
6,821,104	-		Pf6N2E2_6003	0.18	+2.0
6,821,104	-		Pf6N2E2_6003	0.18	+1.1
6,821,104	-		Pf6N2E2_6003	0.18	+1.8
6,821,104	-		Pf6N2E2_6003	0.18	-1.2
6,821,104	-		Pf6N2E2_6003	0.18	-0.6
6,821,104	-		Pf6N2E2_6003	0.18	+1.7
6,821,104	-		Pf6N2E2_6003	0.18	-2.4
6,821,104	-		Pf6N2E2_6003	0.18	+1.5
6,821,104	-		Pf6N2E2_6003	0.18	+1.8
6,821,152	+		Pf6N2E2_6003	0.24	-1.9
6,821,152	+		Pf6N2E2_6003	0.24	+1.8
6,821,152	+		Pf6N2E2_6003	0.24	-1.9
6,821,152	+		Pf6N2E2_6003	0.24	+0.6
6,821,152	+		Pf6N2E2_6003	0.24	-0.2
6,821,153	-		Pf6N2E2_6003	0.24	-2.4
6,821,153	-		Pf6N2E2_6003	0.24	+0.1
6,821,153	-		Pf6N2E2_6003	0.24	-2.4
6,821,298	-		Pf6N2E2_6003	0.44	+2.8
6,821,298	-		Pf6N2E2_6003	0.44	-0.2
6,821,298	-		Pf6N2E2_6003	0.44	+1.2
6,821,298	-		Pf6N2E2_6003	0.44	+0.4
6,821,467	+		Pf6N2E2_6003	0.68	-0.4
6,821,467	+		Pf6N2E2_6003	0.68	-1.2
6,821,467	+		Pf6N2E2_6003	0.68	+0.3
6,821,468	-		Pf6N2E2_6003	0.68	-1.6
6,821,510	+		Pf6N2E2_6003	0.74	+0.3
6,821,575	+		Pf6N2E2_6003	0.83	-2.4
6,821,575	+		Pf6N2E2_6003	0.83	-2.6
6,821,576	-		Pf6N2E2_6003	0.83	+0.6
6,821,576	-		Pf6N2E2_6003	0.83	+0.1
6,821,655	+				-0.2
6,821,676	+				+0.4
6,821,676	+				+1.5
6,821,681	+				-0.8
6,821,681	+				-1.5
6,821,682	-				+2.0
6,821,682	-				+0.8
6,821,682	-				+0.3
6,821,688	+				+0.8
6,821,735	+				-1.4
6,821,768	-				-1.7
6,821,769	+				-1.1
6,821,769	+				-0.6
6,821,769	+				+0.5
6,821,769	+				-1.9
6,821,769	+				+1.3
6,821,769	+				+1.2
6,821,769	+				-0.2
6,821,770	-				+2.1
6,821,770	-				-2.2
6,821,770	-				-1.1
6,821,770	-				-0.4
6,821,770	-				+0.9
6,821,770	-				+1.2
6,821,770	-				+1.3
6,821,770	-				+1.8
6,821,770	-				-0.6
6,821,770	-				+2.3
6,821,770	-				+2.3
6,821,775	+				-1.7
6,821,776	-				-1.4
6,821,794	-				-1.6
6,821,811	+				-0.8
6,821,811	+				+2.9
6,821,812	-				+1.9
6,821,812	-				+1.1
6,821,831	-				-2.3