Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5695

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
6,507,182	+		Pf6N2E2_5693	0.74	-2.7
6,507,182	+		Pf6N2E2_5693	0.74	+1.2
6,507,182	+		Pf6N2E2_5693	0.74	-3.1
6,507,182	+		Pf6N2E2_5693	0.74	+0.3
6,507,182	+		Pf6N2E2_5693	0.74	-3.0
6,507,182	+		Pf6N2E2_5693	0.74	-2.3
6,507,182	+		Pf6N2E2_5693	0.74	+2.2
6,507,182	+		Pf6N2E2_5693	0.74	-1.5
6,507,183	-		Pf6N2E2_5693	0.74	-2.3
6,507,183	-		Pf6N2E2_5693	0.74	-2.1
6,507,183	-		Pf6N2E2_5693	0.74	-0.6
6,507,183	-		Pf6N2E2_5693	0.74	+0.7
6,507,183	-		Pf6N2E2_5693	0.74	+2.4
6,507,226	-		Pf6N2E2_5693	0.79	-0.6
6,507,226	-		Pf6N2E2_5693	0.79	+2.4
6,507,226	-		Pf6N2E2_5693	0.79	+0.6
6,507,226	-		Pf6N2E2_5693	0.79	-0.7
6,507,226	-		Pf6N2E2_5693	0.79	-1.7
6,507,226	-		Pf6N2E2_5693	0.79	-0.7
6,507,226	-		Pf6N2E2_5693	0.79	+0.2
6,507,233	+		Pf6N2E2_5693	0.80	-0.1
6,507,233	+		Pf6N2E2_5693	0.80	+2.3
6,507,233	+		Pf6N2E2_5693	0.80	+1.2
6,507,234	-		Pf6N2E2_5693	0.80	+1.6
6,507,347	+				-2.9
6,507,348	-				-2.6
6,507,380	+				+0.7
6,507,380	+				+1.4
6,507,380	+				+2.0
6,507,381	-				+1.2
6,507,381	-				-1.6
6,507,465	+				+1.1
6,507,465	+				-2.4
6,507,466	-				+0.2
6,507,466	-				+0.2
6,507,618	+				+0.8
6,507,650	+				-1.4
6,507,651	-				-3.2
6,507,661	+				-0.2
6,507,661	+				+0.1
6,507,661	+				-1.9
6,507,661	+				-2.3
6,507,662	-				+1.8
6,507,662	-				+1.8
6,507,662	-				+2.9
6,507,662	-				+1.3
6,507,665	+				+1.5
6,507,665	+				+0.4
6,507,666	-				+0.4
6,507,666	-				+1.7
6,507,666	-				-2.9
6,507,666	-				+0.9
6,507,666	-				-0.8
6,507,666	-				-2.7
6,507,666	-				+2.6
6,507,666	-				+0.9
6,507,805	+		Pf6N2E2_5694	0.27	+1.9
6,507,806	-		Pf6N2E2_5694	0.27	-2.7
6,507,806	-		Pf6N2E2_5694	0.27	+2.4
6,507,806	-		Pf6N2E2_5694	0.27	-2.2
6,507,946	+		Pf6N2E2_5694	0.62	-0.6
6,507,946	+		Pf6N2E2_5694	0.62	+1.3
6,507,946	+		Pf6N2E2_5694	0.62	-2.5
6,507,946	+		Pf6N2E2_5694	0.62	-0.1
6,507,947	-		Pf6N2E2_5694	0.62	-1.2
6,507,947	-		Pf6N2E2_5694	0.62	+1.0
6,508,012	+		Pf6N2E2_5694	0.78	+1.0
6,508,013	-		Pf6N2E2_5694	0.78	+1.6
6,508,013	-		Pf6N2E2_5694	0.78	+3.1
6,508,013	-		Pf6N2E2_5694	0.78	+2.8
6,508,099	+				+1.6
6,508,099	+				-3.2
6,508,099	+				+0.8
6,508,099	+				-2.6
6,508,099	+				-2.8
6,508,099	+				+1.1
6,508,099	+				+1.2
6,508,100	-				+1.4
6,508,100	-				-1.9
6,508,116	+				+1.7
6,508,121	+				-1.0
6,508,121	+				-1.7
6,508,121	+				-2.6
6,508,121	+				+1.6
6,508,122	-				+2.0
6,508,229	-		Pf6N2E2_5695	0.28	+2.8
6,508,328	+		Pf6N2E2_5695	0.50	+3.4
6,508,411	+		Pf6N2E2_5695	0.69	-0.0
6,508,411	+		Pf6N2E2_5695	0.69	-1.5
6,508,411	+		Pf6N2E2_5695	0.69	-0.8
6,508,411	+		Pf6N2E2_5695	0.69	+1.4
6,508,411	+		Pf6N2E2_5695	0.69	+0.1
6,508,411	+		Pf6N2E2_5695	0.69	-0.3
6,508,412	-		Pf6N2E2_5695	0.69	+0.4
6,508,412	-		Pf6N2E2_5695	0.69	+0.1
6,508,412	-		Pf6N2E2_5695	0.69	+2.0
6,508,417	+		Pf6N2E2_5695	0.70	-0.6
6,508,418	-		Pf6N2E2_5695	0.70	+2.3
6,508,418	-		Pf6N2E2_5695	0.70	+1.9
6,508,418	-		Pf6N2E2_5695	0.70	+0.7
6,508,418	-		Pf6N2E2_5695	0.70	+0.8
6,508,418	-		Pf6N2E2_5695	0.70	+0.5
6,508,418	-		Pf6N2E2_5695	0.70	+2.8
6,508,549	+				-1.0
6,508,581	+				+0.0
6,508,581	+				+0.9
6,508,852	+		Pf6N2E2_5696	0.40	-2.4
6,508,852	+		Pf6N2E2_5696	0.40	-3.5
6,508,852	+		Pf6N2E2_5696	0.40	-2.1
6,508,853	-		Pf6N2E2_5696	0.40	-2.8
6,508,853	-		Pf6N2E2_5696	0.40	-2.0
6,508,932	+		Pf6N2E2_5696	0.51	-0.5
6,509,116	+		Pf6N2E2_5696	0.76	-1.5
6,509,116	+		Pf6N2E2_5696	0.76	-2.2
6,509,116	+		Pf6N2E2_5696	0.76	+0.2
6,509,116	+		Pf6N2E2_5696	0.76	-1.5
6,509,116	+		Pf6N2E2_5696	0.76	-0.2
6,509,116	+		Pf6N2E2_5696	0.76	-2.0
6,509,117	-		Pf6N2E2_5696	0.76	-1.1
6,509,117	-		Pf6N2E2_5696	0.76	+1.7
6,509,117	-		Pf6N2E2_5696	0.76	+0.4
6,509,117	-		Pf6N2E2_5696	0.76	-1.0
6,509,117	-		Pf6N2E2_5696	0.76	-3.6
6,509,274	+				+1.8
6,509,274	+				+0.4
6,509,274	+				+2.0
6,509,275	-				-1.3
6,509,275	-				-3.6
6,509,280	+				-1.5
6,509,280	+				-1.0
6,509,280	+				-0.2
6,509,280	+				+0.6
6,509,280	+				-2.3
6,509,280	+				+0.4
6,509,281	-				-0.1
6,509,281	-				-0.8
6,509,281	-				-1.4
6,509,284	+				+0.6
6,509,284	+				-2.9
6,509,284	+				+0.1
6,509,284	+				-1.7
6,509,284	+				+1.0
6,509,284	+				+2.0
6,509,284	+				+0.3
6,509,284	+				-2.4
6,509,284	+				+2.1
6,509,285	-				-0.5
6,509,285	-				-0.2
6,509,345	+				-2.2
6,509,441	+				-0.1
6,509,442	-				+0.3
6,509,442	-				+1.1