Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4827

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
5,580,728	-		Pf6N2E2_4825	0.87	+0.0
5,580,728	-		Pf6N2E2_4825	0.87	-2.6
5,580,831	+				+0.3
5,580,831	+				-2.8
5,580,831	+				+1.6
5,580,831	+				+1.0
5,580,831	+				-0.3
5,580,832	-				-0.7
5,580,832	-				-1.7
5,580,839	+				-0.9
5,580,839	+				-2.2
5,580,840	-				-1.6
5,580,966	-		Pf6N2E2_4826	0.13	-0.5
5,581,113	+		Pf6N2E2_4826	0.30	-0.5
5,581,130	+		Pf6N2E2_4826	0.32	+1.2
5,581,130	+		Pf6N2E2_4826	0.32	-1.1
5,581,130	+		Pf6N2E2_4826	0.32	+1.2
5,581,182	+		Pf6N2E2_4826	0.38	+1.6
5,581,584	+		Pf6N2E2_4826	0.86	+0.4
5,581,584	+		Pf6N2E2_4826	0.86	+3.0
5,581,584	+		Pf6N2E2_4826	0.86	-2.4
5,581,584	+		Pf6N2E2_4826	0.86	+0.9
5,581,584	+		Pf6N2E2_4826	0.86	-0.1
5,581,584	+		Pf6N2E2_4826	0.86	+1.1
5,581,584	+		Pf6N2E2_4826	0.86	+0.4
5,581,584	+		Pf6N2E2_4826	0.86	+0.0
5,581,584	+		Pf6N2E2_4826	0.86	+0.5
5,581,867	-		Pf6N2E2_4827	0.24	-3.1
5,581,879	+		Pf6N2E2_4827	0.25	-2.6
5,581,959	-		Pf6N2E2_4827	0.37	-1.7
5,581,971	+		Pf6N2E2_4827	0.38	-2.1
5,581,971	+		Pf6N2E2_4827	0.38	+0.8
5,581,972	-		Pf6N2E2_4827	0.39	-1.8
5,581,972	-		Pf6N2E2_4827	0.39	+1.0
5,581,972	-		Pf6N2E2_4827	0.39	+1.1
5,582,006	+		Pf6N2E2_4827	0.43	-0.3
5,582,367	+				+0.3
5,582,650	+		Pf6N2E2_4828	0.39	+1.5
5,582,650	+		Pf6N2E2_4828	0.39	+2.3
5,582,651	-		Pf6N2E2_4828	0.39	+3.8
5,582,651	-		Pf6N2E2_4828	0.39	+0.7
5,582,651	-		Pf6N2E2_4828	0.39	-0.3
5,582,685	-		Pf6N2E2_4828	0.44	+0.1
5,582,685	-		Pf6N2E2_4828	0.44	-1.9
5,582,685	-		Pf6N2E2_4828	0.44	+1.6
5,582,685	-		Pf6N2E2_4828	0.44	+0.4
5,582,688	+		Pf6N2E2_4828	0.45	-0.2
5,582,688	+		Pf6N2E2_4828	0.45	-1.3
5,582,689	-		Pf6N2E2_4828	0.45	+0.7
5,582,689	-		Pf6N2E2_4828	0.45	+1.6
5,582,733	+		Pf6N2E2_4828	0.52	-3.1
5,582,813	+		Pf6N2E2_4828	0.64	-2.6
5,582,850	+		Pf6N2E2_4828	0.70	+1.7
5,582,850	+		Pf6N2E2_4828	0.70	-0.9
5,582,851	-		Pf6N2E2_4828	0.70	-0.2
5,582,851	-		Pf6N2E2_4828	0.70	+1.7
5,582,851	-		Pf6N2E2_4828	0.70	+1.0
5,582,885	+		Pf6N2E2_4828	0.75	-0.2
5,582,885	+		Pf6N2E2_4828	0.75	-2.8
5,582,885	+		Pf6N2E2_4828	0.75	+1.3
5,582,885	+		Pf6N2E2_4828	0.75	-1.3
5,582,885	+		Pf6N2E2_4828	0.75	-2.5
5,582,885	+		Pf6N2E2_4828	0.75	+1.3
5,582,885	+		Pf6N2E2_4828	0.75	+3.1
5,582,885	+		Pf6N2E2_4828	0.75	-0.2
5,582,886	-		Pf6N2E2_4828	0.76	+0.3
5,582,886	-		Pf6N2E2_4828	0.76	+2.1
5,582,886	-		Pf6N2E2_4828	0.76	+3.5
5,582,893	+		Pf6N2E2_4828	0.77	-3.0
5,583,031	+				+1.7
5,583,031	+				+1.6
5,583,049	+				-2.1
5,583,049	+				-1.0
5,583,049	+				+1.2
5,583,102	+				-1.6
5,583,139	+				+1.7
5,583,140	-				+0.1
5,583,150	+				-1.7
5,583,150	+				+1.3
5,583,166	-				-2.0
5,583,166	-				-0.2
5,583,182	+				-1.7
5,583,182	+				+0.3
5,583,183	-				+0.1
5,583,186	+				+1.2
5,583,186	+				+0.6
5,583,186	+				+1.7
5,583,186	+				-1.9
5,583,186	+				-2.2
5,583,186	+				+0.7
5,583,186	+				+0.8
5,583,187	-				+2.4
5,583,196	+				-1.0
5,583,196	+				+0.1
5,583,196	+				-3.8
5,583,197	-				-0.5
5,583,210	+				-1.7
5,583,211	-				-1.9
5,583,211	-				-2.0
5,583,244	+				-0.1
5,583,244	+				+1.6
5,583,244	+				-0.9
5,583,244	+				+1.7
5,583,244	+				-2.9
5,583,244	+				-1.1
5,583,263	+				+3.1
5,583,263	+				-0.2