Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_100

Experiment: Nickel (II) chloride 0.0025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 0.0025 M
143,230	-		Pf6N2E2_97	0.82	-0.5
143,392	+		Pf6N2E2_98	0.13	+1.7
143,393	-		Pf6N2E2_98	0.13	-1.8
143,629	+		Pf6N2E2_98	0.90	-0.8
143,630	-				-0.2
143,757	-		Pf6N2E2_99	0.30	+0.2
143,757	-		Pf6N2E2_99	0.30	-1.5
143,757	-		Pf6N2E2_99	0.30	-0.2
143,768	-		Pf6N2E2_99	0.38	-0.2
143,870	+				+1.4
143,923	+				+1.2
143,923	+				-0.1
143,923	+				-1.8
143,923	+				+1.2
143,923	+				+0.5
143,923	+				+0.2
143,924	-				+0.8
143,924	-				+0.7
143,954	-				+0.4
143,954	-				-0.4
143,976	-				-1.8
144,117	+				-2.2
144,117	+				-0.8
144,118	-				-0.3
144,118	-				+0.2
144,118	-				-0.0
144,118	-				-0.2
144,128	+				+0.8
144,129	-				+0.2
144,129	-				-0.2
144,129	-				-1.9
144,129	-				-0.4
144,132	-				+0.4
144,132	-				+0.8
144,132	-				+1.0
144,132	-				-0.7
144,132	-				-2.7
144,172	+				+0.2
144,172	+				-1.8
144,172	+				+2.2
144,173	-				-0.7
144,173	-				-0.1
144,196	+				+2.0
144,196	+				+0.8
144,196	+				-0.5
144,197	-				-0.4
144,197	-				-1.6
144,197	-				-0.1
144,276	-		Pf6N2E2_100	0.10	-0.9
144,300	+		Pf6N2E2_100	0.12	-1.9
144,403	+		Pf6N2E2_100	0.21	-0.1
144,404	-		Pf6N2E2_100	0.21	+0.3
144,511	+		Pf6N2E2_100	0.30	+1.3
144,511	+		Pf6N2E2_100	0.30	+0.3
144,512	-		Pf6N2E2_100	0.30	+0.6
144,512	-		Pf6N2E2_100	0.30	-2.0
144,600	+		Pf6N2E2_100	0.37	-0.3
144,610	+		Pf6N2E2_100	0.38	-0.3
144,610	+		Pf6N2E2_100	0.38	-0.5
144,610	+		Pf6N2E2_100	0.38	+0.3
144,631	+		Pf6N2E2_100	0.39	+0.7
144,827	-		Pf6N2E2_100	0.56	-1.8
144,900	+		Pf6N2E2_100	0.62	-0.7
144,901	-		Pf6N2E2_100	0.62	+0.3
144,951	+		Pf6N2E2_100	0.66	-1.5
144,951	+		Pf6N2E2_100	0.66	-0.3
144,961	+		Pf6N2E2_100	0.67	+0.7
144,979	+		Pf6N2E2_100	0.68	-0.5
144,980	-		Pf6N2E2_100	0.68	-1.8
144,980	-		Pf6N2E2_100	0.68	-0.3
144,980	-		Pf6N2E2_100	0.68	-0.6
144,985	+		Pf6N2E2_100	0.69	-0.3
144,985	+		Pf6N2E2_100	0.69	+1.2
144,986	-		Pf6N2E2_100	0.69	-1.0
144,986	-		Pf6N2E2_100	0.69	-0.1
144,986	-		Pf6N2E2_100	0.69	-0.5
144,986	-		Pf6N2E2_100	0.69	+0.1
144,986	-		Pf6N2E2_100	0.69	-2.2
145,000	+		Pf6N2E2_100	0.70	-0.2
145,001	-		Pf6N2E2_100	0.70	+0.2
145,079	-		Pf6N2E2_100	0.76	-0.6
145,079	-		Pf6N2E2_100	0.76	-0.4
145,136	-		Pf6N2E2_100	0.81	-0.3
145,352	-				+0.0
145,352	-				-0.1
145,391	+				+0.0
145,391	+				+0.6
145,391	+				+0.5
145,391	+				+1.6
145,391	+				-0.3
145,392	-				+1.4
145,392	-				+0.7
145,392	-				+0.1
145,392	-				-0.6
145,393	+				+1.2
145,393	+				+0.3
145,433	+				-0.3
145,434	-				+1.6
145,434	-				-1.4
145,436	+				-0.2
145,437	-				-0.5
145,437	-				+0.1
145,452	+				-1.4
145,452	+				+0.3
145,452	+				-0.1
145,452	+				-2.2
145,452	+				-0.8
145,452	+				-1.8
145,453	-				-0.5
145,453	-				+0.5
145,453	-				+1.1
145,453	-				+1.2
145,454	+				+0.6
145,454	+				+1.2
145,454	+				-1.7
145,454	+				+0.3
145,455	-				+0.3
145,455	-				-0.2
145,455	-				+0.2
145,460	+				-0.7
145,630	+		Pf6N2E2_101	0.27	-1.4
145,630	+		Pf6N2E2_101	0.27	-0.4
145,630	+		Pf6N2E2_101	0.27	-0.2
145,631	-		Pf6N2E2_101	0.27	-1.2
145,907	+		Pf6N2E2_101	0.81	+1.1
145,908	-		Pf6N2E2_101	0.81	+1.3
145,917	-		Pf6N2E2_101	0.83	-0.1
145,976	+				-0.2
145,976	+				-0.4
145,976	+				+0.1
145,976	+				+0.6
145,976	+				+0.8
145,977	-				-1.5
145,977	-				+0.6
145,977	-				+0.3
145,977	-				-1.9
145,977	-				+1.2
145,977	-				+0.9
146,004	-				-2.5
146,014	-				-0.1
146,027	+				-0.7
146,027	+				+1.0
146,028	-				+0.0
146,143	-				-0.5
146,143	-				-0.1
146,143	-				+0.2
146,268	+				+0.8
146,268	+				-0.6
146,268	+				-0.3
146,294	+				+0.5
146,294	+				-1.2
146,294	+				-0.7
146,298	+				+2.2
146,298	+				-0.6
146,298	+				+0.0
146,298	+				+0.5
146,298	+				+0.5
146,298	+				-0.7
146,342	+				+1.5