Experiment: Magnesium chloride 0.125 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3972 and Pf6N2E2_3973 are separated by 627 nucleotides Pf6N2E2_3973 and Pf6N2E2_3974 are separated by 288 nucleotides
Pf6N2E2_3972 - Cell division inhibitor, at 4,621,635 to 4,622,123
_3972
Pf6N2E2_3973 - hypothetical protein, at 4,622,751 to 4,623,119
_3973
Pf6N2E2_3974 - Taurine transport system permease protein TauC, at 4,623,408 to 4,624,274
_3974
Position (kb)
4622
4623
4624 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4621.882 kb on + strand, within Pf6N2E2_3972 at 4621.882 kb on + strand, within Pf6N2E2_3972 at 4621.882 kb on + strand, within Pf6N2E2_3972 at 4621.882 kb on + strand, within Pf6N2E2_3972 at 4621.882 kb on + strand, within Pf6N2E2_3972 at 4621.882 kb on + strand, within Pf6N2E2_3972 at 4621.883 kb on - strand, within Pf6N2E2_3972 at 4621.883 kb on - strand, within Pf6N2E2_3972 at 4621.883 kb on - strand, within Pf6N2E2_3972 at 4621.883 kb on - strand, within Pf6N2E2_3972 at 4621.883 kb on - strand, within Pf6N2E2_3972 at 4621.883 kb on - strand, within Pf6N2E2_3972 at 4621.883 kb on - strand, within Pf6N2E2_3972 at 4621.891 kb on + strand, within Pf6N2E2_3972 at 4621.891 kb on + strand, within Pf6N2E2_3972 at 4621.891 kb on + strand, within Pf6N2E2_3972 at 4621.892 kb on - strand, within Pf6N2E2_3972 at 4622.074 kb on + strand, within Pf6N2E2_3972 at 4622.074 kb on + strand, within Pf6N2E2_3972 at 4622.208 kb on - strand at 4622.211 kb on + strand at 4622.211 kb on + strand at 4622.380 kb on - strand at 4622.436 kb on + strand at 4622.436 kb on + strand at 4622.457 kb on + strand at 4622.498 kb on - strand at 4622.548 kb on + strand at 4622.564 kb on - strand at 4622.564 kb on - strand at 4622.564 kb on - strand at 4622.580 kb on + strand at 4622.580 kb on + strand at 4622.580 kb on + strand at 4622.581 kb on - strand at 4622.581 kb on - strand at 4622.581 kb on - strand at 4622.581 kb on - strand at 4622.581 kb on - strand at 4622.581 kb on - strand at 4622.581 kb on - strand at 4622.605 kb on - strand at 4622.605 kb on - strand at 4622.685 kb on + strand at 4622.685 kb on + strand at 4622.685 kb on + strand at 4622.685 kb on + strand at 4622.685 kb on + strand at 4622.685 kb on + strand at 4622.685 kb on + strand at 4622.685 kb on + strand at 4622.685 kb on + strand at 4622.686 kb on - strand at 4622.686 kb on - strand at 4622.686 kb on - strand at 4622.686 kb on - strand at 4622.698 kb on + strand at 4622.698 kb on + strand at 4622.698 kb on + strand at 4622.698 kb on + strand at 4622.698 kb on + strand at 4622.698 kb on + strand at 4622.698 kb on + strand at 4622.699 kb on - strand at 4622.699 kb on - strand at 4622.699 kb on - strand at 4622.699 kb on - strand at 4622.700 kb on + strand at 4622.700 kb on + strand at 4622.700 kb on + strand at 4622.700 kb on + strand at 4622.718 kb on + strand at 4622.718 kb on + strand at 4622.737 kb on + strand at 4622.737 kb on + strand at 4622.737 kb on + strand at 4622.738 kb on - strand at 4622.850 kb on + strand, within Pf6N2E2_3973 at 4622.850 kb on + strand, within Pf6N2E2_3973 at 4622.850 kb on + strand, within Pf6N2E2_3973 at 4622.851 kb on - strand, within Pf6N2E2_3973 at 4622.851 kb on - strand, within Pf6N2E2_3973 at 4622.851 kb on - strand, within Pf6N2E2_3973 at 4622.853 kb on + strand, within Pf6N2E2_3973 at 4622.854 kb on - strand, within Pf6N2E2_3973 at 4622.889 kb on - strand, within Pf6N2E2_3973 at 4623.192 kb on + strand at 4623.553 kb on + strand, within Pf6N2E2_3974 at 4623.553 kb on + strand, within Pf6N2E2_3974 at 4623.553 kb on + strand, within Pf6N2E2_3974 at 4623.553 kb on + strand, within Pf6N2E2_3974 at 4623.553 kb on + strand, within Pf6N2E2_3974 at 4623.553 kb on + strand, within Pf6N2E2_3974 at 4623.553 kb on + strand, within Pf6N2E2_3974 at 4623.553 kb on + strand, within Pf6N2E2_3974 at 4623.553 kb on + strand, within Pf6N2E2_3974 at 4623.554 kb on - strand, within Pf6N2E2_3974 at 4623.554 kb on - strand, within Pf6N2E2_3974 at 4623.554 kb on - strand, within Pf6N2E2_3974 at 4623.554 kb on - strand, within Pf6N2E2_3974 at 4623.554 kb on - strand, within Pf6N2E2_3974 at 4623.554 kb on - strand, within Pf6N2E2_3974 at 4623.715 kb on + strand, within Pf6N2E2_3974 at 4623.715 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.767 kb on - strand, within Pf6N2E2_3974 at 4623.767 kb on - strand, within Pf6N2E2_3974 at 4623.767 kb on - strand, within Pf6N2E2_3974 at 4623.767 kb on - strand, within Pf6N2E2_3974 at 4623.767 kb on - strand, within Pf6N2E2_3974 at 4623.767 kb on - strand, within Pf6N2E2_3974 at 4623.767 kb on - strand, within Pf6N2E2_3974 at 4623.767 kb on - strand, within Pf6N2E2_3974 at 4623.767 kb on - strand, within Pf6N2E2_3974 at 4624.048 kb on + strand, within Pf6N2E2_3974 at 4624.048 kb on + strand, within Pf6N2E2_3974 at 4624.049 kb on - strand, within Pf6N2E2_3974
Per-strain Table
Position Strand Gene LocusTag Fraction Magnesium chloride 0.125 M remove 4,621,882 + Pf6N2E2_3972 0.51 -0.8 4,621,882 + Pf6N2E2_3972 0.51 -1.1 4,621,882 + Pf6N2E2_3972 0.51 -0.8 4,621,882 + Pf6N2E2_3972 0.51 -1.9 4,621,882 + Pf6N2E2_3972 0.51 -0.5 4,621,882 + Pf6N2E2_3972 0.51 +0.8 4,621,883 - Pf6N2E2_3972 0.51 -0.8 4,621,883 - Pf6N2E2_3972 0.51 +1.2 4,621,883 - Pf6N2E2_3972 0.51 +0.9 4,621,883 - Pf6N2E2_3972 0.51 +0.1 4,621,883 - Pf6N2E2_3972 0.51 +1.2 4,621,883 - Pf6N2E2_3972 0.51 -0.6 4,621,883 - Pf6N2E2_3972 0.51 +1.8 4,621,891 + Pf6N2E2_3972 0.52 +0.6 4,621,891 + Pf6N2E2_3972 0.52 +0.9 4,621,891 + Pf6N2E2_3972 0.52 -0.2 4,621,892 - Pf6N2E2_3972 0.53 -0.8 4,622,074 + Pf6N2E2_3972 0.90 -1.1 4,622,074 + Pf6N2E2_3972 0.90 +0.3 4,622,208 - -1.4 4,622,211 + +0.8 4,622,211 + -1.2 4,622,380 - +0.2 4,622,436 + -0.6 4,622,436 + +0.8 4,622,457 + -0.2 4,622,498 - -1.5 4,622,548 + -0.8 4,622,564 - -0.2 4,622,564 - -1.1 4,622,564 - -0.2 4,622,580 + -2.1 4,622,580 + -1.5 4,622,580 + -0.2 4,622,581 - -0.2 4,622,581 - -0.2 4,622,581 - -0.1 4,622,581 - +1.2 4,622,581 - +0.2 4,622,581 - +0.3 4,622,581 - -0.5 4,622,605 - -0.8 4,622,605 - -1.2 4,622,685 + +0.2 4,622,685 + -1.3 4,622,685 + +1.1 4,622,685 + +0.6 4,622,685 + +1.1 4,622,685 + +1.5 4,622,685 + +0.2 4,622,685 + +0.7 4,622,685 + +1.3 4,622,686 - +0.3 4,622,686 - -0.1 4,622,686 - -0.3 4,622,686 - -0.2 4,622,698 + +0.6 4,622,698 + +1.4 4,622,698 + +1.2 4,622,698 + +1.3 4,622,698 + +1.8 4,622,698 + +1.8 4,622,698 + +3.2 4,622,699 - -0.4 4,622,699 - +0.8 4,622,699 - -0.3 4,622,699 - -0.2 4,622,700 + +0.9 4,622,700 + +1.1 4,622,700 + +1.8 4,622,700 + +0.8 4,622,718 + +1.7 4,622,718 + +1.8 4,622,737 + +1.3 4,622,737 + +1.9 4,622,737 + +0.9 4,622,738 - -0.4 4,622,850 + Pf6N2E2_3973 0.27 +0.3 4,622,850 + Pf6N2E2_3973 0.27 -1.1 4,622,850 + Pf6N2E2_3973 0.27 -1.3 4,622,851 - Pf6N2E2_3973 0.27 -2.5 4,622,851 - Pf6N2E2_3973 0.27 +0.5 4,622,851 - Pf6N2E2_3973 0.27 -1.6 4,622,853 + Pf6N2E2_3973 0.28 -1.3 4,622,854 - Pf6N2E2_3973 0.28 -2.2 4,622,889 - Pf6N2E2_3973 0.37 +0.2 4,623,192 + -0.1 4,623,553 + Pf6N2E2_3974 0.17 +0.1 4,623,553 + Pf6N2E2_3974 0.17 -1.0 4,623,553 + Pf6N2E2_3974 0.17 +0.2 4,623,553 + Pf6N2E2_3974 0.17 -1.5 4,623,553 + Pf6N2E2_3974 0.17 +1.0 4,623,553 + Pf6N2E2_3974 0.17 -0.4 4,623,553 + Pf6N2E2_3974 0.17 +1.2 4,623,553 + Pf6N2E2_3974 0.17 +0.4 4,623,553 + Pf6N2E2_3974 0.17 -0.0 4,623,554 - Pf6N2E2_3974 0.17 -0.4 4,623,554 - Pf6N2E2_3974 0.17 -0.4 4,623,554 - Pf6N2E2_3974 0.17 -0.2 4,623,554 - Pf6N2E2_3974 0.17 -0.9 4,623,554 - Pf6N2E2_3974 0.17 -0.0 4,623,554 - Pf6N2E2_3974 0.17 +0.4 4,623,715 + Pf6N2E2_3974 0.35 -0.3 4,623,715 + Pf6N2E2_3974 0.35 -0.4 4,623,766 + Pf6N2E2_3974 0.41 +1.1 4,623,766 + Pf6N2E2_3974 0.41 +0.5 4,623,766 + Pf6N2E2_3974 0.41 +0.4 4,623,766 + Pf6N2E2_3974 0.41 +1.2 4,623,766 + Pf6N2E2_3974 0.41 -0.8 4,623,766 + Pf6N2E2_3974 0.41 +0.6 4,623,766 + Pf6N2E2_3974 0.41 +1.2 4,623,766 + Pf6N2E2_3974 0.41 +2.8 4,623,766 + Pf6N2E2_3974 0.41 +0.2 4,623,766 + Pf6N2E2_3974 0.41 +0.2 4,623,767 - Pf6N2E2_3974 0.41 +1.1 4,623,767 - Pf6N2E2_3974 0.41 -0.3 4,623,767 - Pf6N2E2_3974 0.41 +1.0 4,623,767 - Pf6N2E2_3974 0.41 -1.0 4,623,767 - Pf6N2E2_3974 0.41 +0.9 4,623,767 - Pf6N2E2_3974 0.41 -0.7 4,623,767 - Pf6N2E2_3974 0.41 -0.4 4,623,767 - Pf6N2E2_3974 0.41 -0.2 4,623,767 - Pf6N2E2_3974 0.41 -0.5 4,624,048 + Pf6N2E2_3974 0.74 -1.8 4,624,048 + Pf6N2E2_3974 0.74 +0.2 4,624,049 - Pf6N2E2_3974 0.74 -1.2
Or see this region's nucleotide sequence