Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS20590

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
4,721,358	+		HSERO_RS20585	0.45	+1.1
4,721,565	+		HSERO_RS20585	0.64	+0.3
4,721,565	+		HSERO_RS20585	0.64	-0.0
4,721,592	-		HSERO_RS20585	0.67	+0.6
4,721,627	-		HSERO_RS20585	0.70	+0.0
4,721,916	-				+0.2
4,721,927	-				+0.6
4,721,972	+				+0.3
4,721,975	-				+0.1
4,722,110	+				+0.9
4,722,293	+		HSERO_RS20590	0.11	-3.2
4,722,621	+		HSERO_RS20590	0.27	-2.7
4,722,890	-		HSERO_RS20590	0.40	-3.4
4,723,037	+		HSERO_RS20590	0.47	-4.1
4,723,037	+		HSERO_RS20590	0.47	-1.1
4,723,045	-		HSERO_RS20590	0.48	-2.3
4,723,147	+		HSERO_RS20590	0.53	-3.7
4,723,329	+		HSERO_RS20590	0.62	-2.5
4,723,365	-		HSERO_RS20590	0.63	-3.3
4,723,502	-		HSERO_RS20590	0.70	-3.0
4,723,540	-		HSERO_RS20590	0.72	-0.9
4,723,646	-		HSERO_RS20590	0.77	-4.1
4,723,676	+		HSERO_RS20590	0.78	-3.0
4,723,745	+		HSERO_RS20590	0.82	-1.7
4,723,785	+		HSERO_RS20590	0.84	-3.5
4,723,785	+		HSERO_RS20590	0.84	-4.0
4,723,827	-		HSERO_RS20590	0.86	-3.9
4,723,868	+		HSERO_RS20590	0.88	-3.6
4,724,011	-				-4.2
4,724,051	-				-2.1
4,724,094	+				-1.9
4,724,143	+				-1.7
4,724,176	+				-2.8
4,724,197	+				-1.8
4,724,197	+				-1.6
4,724,286	-				-0.7
4,724,352	-				+0.2
4,724,454	+				-2.0
4,724,710	+		HSERO_RS20595	0.27	-2.6
4,724,718	-		HSERO_RS20595	0.28	-0.2
4,724,741	+		HSERO_RS20595	0.30	-1.1
4,724,741	+		HSERO_RS20595	0.30	+0.5
4,725,031	+		HSERO_RS20595	0.55	-2.2