Experiment: LB no stress 48 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_571 and Pf6N2E2_572 are separated by 184 nucleotides Pf6N2E2_572 and Pf6N2E2_573 are separated by 67 nucleotides
Pf6N2E2_571 - ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63), at 645,326 to 646,369
_571
Pf6N2E2_572 - hypothetical protein, at 646,554 to 647,033
_572
Pf6N2E2_573 - Potassium uptake protein TrkH, at 647,101 to 648,555
_573
Position (kb) 646
647
648 Strain fitness (log2 ratio) -1
0
1 at 645.721 kb on - strand, within Pf6N2E2_571 at 645.725 kb on + strand, within Pf6N2E2_571 at 645.726 kb on - strand, within Pf6N2E2_571 at 645.726 kb on - strand, within Pf6N2E2_571 at 645.726 kb on - strand, within Pf6N2E2_571 at 645.726 kb on - strand, within Pf6N2E2_571 at 645.726 kb on - strand, within Pf6N2E2_571 at 646.015 kb on - strand, within Pf6N2E2_571 at 646.015 kb on - strand, within Pf6N2E2_571 at 646.015 kb on - strand, within Pf6N2E2_571 at 646.298 kb on - strand at 646.400 kb on + strand at 646.400 kb on + strand at 646.420 kb on + strand at 646.420 kb on + strand at 646.420 kb on + strand at 646.420 kb on + strand at 646.421 kb on - strand at 646.421 kb on - strand at 646.517 kb on - strand at 646.565 kb on + strand at 646.565 kb on + strand at 646.566 kb on - strand at 646.656 kb on + strand, within Pf6N2E2_572 at 646.656 kb on + strand, within Pf6N2E2_572 at 646.926 kb on - strand, within Pf6N2E2_572 at 646.973 kb on + strand, within Pf6N2E2_572 at 647.106 kb on - strand at 647.174 kb on - strand at 647.347 kb on - strand, within Pf6N2E2_573 at 647.347 kb on - strand, within Pf6N2E2_573 at 647.412 kb on - strand, within Pf6N2E2_573 at 647.467 kb on + strand, within Pf6N2E2_573 at 647.468 kb on - strand, within Pf6N2E2_573 at 647.480 kb on - strand, within Pf6N2E2_573 at 647.480 kb on - strand, within Pf6N2E2_573 at 647.546 kb on + strand, within Pf6N2E2_573 at 647.547 kb on - strand, within Pf6N2E2_573 at 647.547 kb on - strand, within Pf6N2E2_573 at 647.547 kb on - strand, within Pf6N2E2_573 at 647.579 kb on - strand, within Pf6N2E2_573 at 647.585 kb on + strand, within Pf6N2E2_573 at 647.585 kb on + strand, within Pf6N2E2_573 at 647.585 kb on + strand, within Pf6N2E2_573 at 647.586 kb on - strand, within Pf6N2E2_573 at 647.586 kb on - strand, within Pf6N2E2_573 at 647.790 kb on - strand, within Pf6N2E2_573 at 647.990 kb on + strand, within Pf6N2E2_573 at 647.990 kb on + strand, within Pf6N2E2_573 at 647.990 kb on + strand, within Pf6N2E2_573 at 647.990 kb on + strand, within Pf6N2E2_573 at 647.991 kb on - strand, within Pf6N2E2_573 at 647.991 kb on - strand, within Pf6N2E2_573 at 648.005 kb on + strand, within Pf6N2E2_573 at 648.005 kb on + strand, within Pf6N2E2_573 at 648.005 kb on + strand, within Pf6N2E2_573 at 648.005 kb on + strand, within Pf6N2E2_573 at 648.006 kb on - strand, within Pf6N2E2_573 at 648.006 kb on - strand, within Pf6N2E2_573 at 648.006 kb on - strand, within Pf6N2E2_573 at 648.006 kb on - strand, within Pf6N2E2_573 at 648.006 kb on - strand, within Pf6N2E2_573 at 648.006 kb on - strand, within Pf6N2E2_573
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress 48 hours remove 645,721 - Pf6N2E2_571 0.38 +0.3 645,725 + Pf6N2E2_571 0.38 +0.2 645,726 - Pf6N2E2_571 0.38 -0.1 645,726 - Pf6N2E2_571 0.38 -1.1 645,726 - Pf6N2E2_571 0.38 +0.7 645,726 - Pf6N2E2_571 0.38 +0.1 645,726 - Pf6N2E2_571 0.38 +1.6 646,015 - Pf6N2E2_571 0.66 +0.3 646,015 - Pf6N2E2_571 0.66 -0.2 646,015 - Pf6N2E2_571 0.66 +0.9 646,298 - +0.0 646,400 + +0.8 646,400 + +0.2 646,420 + +0.5 646,420 + +0.3 646,420 + +0.7 646,420 + +0.6 646,421 - +0.0 646,421 - +1.1 646,517 - +0.0 646,565 + -0.5 646,565 + +0.5 646,566 - +1.3 646,656 + Pf6N2E2_572 0.21 -0.9 646,656 + Pf6N2E2_572 0.21 +0.3 646,926 - Pf6N2E2_572 0.78 -1.2 646,973 + Pf6N2E2_572 0.87 -1.3 647,106 - +1.1 647,174 - +0.4 647,347 - Pf6N2E2_573 0.17 +1.4 647,347 - Pf6N2E2_573 0.17 -1.1 647,412 - Pf6N2E2_573 0.21 -0.5 647,467 + Pf6N2E2_573 0.25 +0.1 647,468 - Pf6N2E2_573 0.25 -1.6 647,480 - Pf6N2E2_573 0.26 +1.0 647,480 - Pf6N2E2_573 0.26 +0.6 647,546 + Pf6N2E2_573 0.31 -1.6 647,547 - Pf6N2E2_573 0.31 +1.7 647,547 - Pf6N2E2_573 0.31 +0.4 647,547 - Pf6N2E2_573 0.31 -0.1 647,579 - Pf6N2E2_573 0.33 +0.1 647,585 + Pf6N2E2_573 0.33 +0.2 647,585 + Pf6N2E2_573 0.33 -0.1 647,585 + Pf6N2E2_573 0.33 -0.0 647,586 - Pf6N2E2_573 0.33 -1.1 647,586 - Pf6N2E2_573 0.33 +0.2 647,790 - Pf6N2E2_573 0.47 -0.3 647,990 + Pf6N2E2_573 0.61 -0.2 647,990 + Pf6N2E2_573 0.61 +0.1 647,990 + Pf6N2E2_573 0.61 -0.1 647,990 + Pf6N2E2_573 0.61 +0.4 647,991 - Pf6N2E2_573 0.61 -0.7 647,991 - Pf6N2E2_573 0.61 +0.9 648,005 + Pf6N2E2_573 0.62 +0.7 648,005 + Pf6N2E2_573 0.62 -0.6 648,005 + Pf6N2E2_573 0.62 +0.2 648,005 + Pf6N2E2_573 0.62 +0.0 648,006 - Pf6N2E2_573 0.62 -1.3 648,006 - Pf6N2E2_573 0.62 +1.0 648,006 - Pf6N2E2_573 0.62 -0.1 648,006 - Pf6N2E2_573 0.62 +0.0 648,006 - Pf6N2E2_573 0.62 +0.3 648,006 - Pf6N2E2_573 0.62 -0.3
Or see this region's nucleotide sequence