Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3910

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
4,544,770	-		Pf6N2E2_3909	0.14	+2.0
4,545,045	+		Pf6N2E2_3909	0.42	+0.5
4,545,046	-		Pf6N2E2_3909	0.42	-2.9
4,545,046	-		Pf6N2E2_3909	0.42	-0.3
4,545,046	-		Pf6N2E2_3909	0.42	-0.5
4,545,046	-		Pf6N2E2_3909	0.42	+2.1
4,545,100	+		Pf6N2E2_3909	0.48	-1.9
4,545,162	+		Pf6N2E2_3909	0.54	-2.3
4,545,162	+		Pf6N2E2_3909	0.54	-3.1
4,545,162	+		Pf6N2E2_3909	0.54	+4.5
4,545,162	+		Pf6N2E2_3909	0.54	+1.6
4,545,162	+		Pf6N2E2_3909	0.54	-2.3
4,545,163	-		Pf6N2E2_3909	0.54	+0.7
4,545,163	-		Pf6N2E2_3909	0.54	-0.5
4,545,163	-		Pf6N2E2_3909	0.54	+0.1
4,545,163	-		Pf6N2E2_3909	0.54	-1.6
4,545,163	-		Pf6N2E2_3909	0.54	-2.3
4,545,163	-		Pf6N2E2_3909	0.54	-0.4
4,545,336	+		Pf6N2E2_3909	0.72	-0.1
4,545,336	+		Pf6N2E2_3909	0.72	-2.0
4,545,570	+				+1.7
4,545,571	-				-2.1
4,545,571	-				-1.0
4,545,580	-				+0.9
4,545,594	+				+0.2
4,545,594	+				+2.0
4,545,594	+				-1.5
4,545,594	+				-0.1
4,545,594	+				+2.5
4,545,594	+				-0.4
4,545,594	+				-2.0
4,545,595	-				+0.6
4,545,595	-				+0.1
4,545,595	-				+0.3
4,545,595	-				+0.5
4,545,595	-				+1.6
4,545,595	-				+0.7
4,545,595	-				+0.8
4,545,595	-				+0.7
4,545,667	-				+1.2
4,545,667	-				+2.0
4,546,016	+		Pf6N2E2_3910	0.49	-0.6
4,546,017	-		Pf6N2E2_3910	0.49	-1.9
4,546,150	+		Pf6N2E2_3910	0.65	-1.1
4,546,150	+		Pf6N2E2_3910	0.65	-0.6
4,546,150	+		Pf6N2E2_3910	0.65	-2.9
4,546,150	+		Pf6N2E2_3910	0.65	+2.2
4,546,150	+		Pf6N2E2_3910	0.65	-0.5
4,546,151	-		Pf6N2E2_3910	0.66	-3.8
4,546,151	-		Pf6N2E2_3910	0.66	-1.3
4,546,279	+		Pf6N2E2_3910	0.82	+0.3
4,546,280	-		Pf6N2E2_3910	0.82	+1.5
4,546,280	-		Pf6N2E2_3910	0.82	-3.4
4,546,431	-				-0.1
4,546,485	+				+1.5
4,546,486	-				+0.7
4,546,486	-				+2.1
4,546,644	-		Pf6N2E2_3911	0.27	+1.4
4,546,797	-		Pf6N2E2_3911	0.45	+1.5
4,546,821	-		Pf6N2E2_3911	0.48	+1.2
4,546,880	+		Pf6N2E2_3911	0.55	-2.1
4,546,880	+		Pf6N2E2_3911	0.55	+0.4
4,546,880	+		Pf6N2E2_3911	0.55	-0.4
4,546,951	-		Pf6N2E2_3911	0.63	+1.2