Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08590

Experiment: Minimal media pH9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH9
1,886,596	+		AO353_08585	0.35	+1.2
1,886,596	+		AO353_08585	0.35	-1.1
1,886,596	+		AO353_08585	0.35	+1.0
1,886,597	-		AO353_08585	0.35	+1.4
1,886,597	-		AO353_08585	0.35	+0.7
1,886,597	-		AO353_08585	0.35	+2.2
1,886,647	+		AO353_08585	0.39	+1.6
1,886,647	+		AO353_08585	0.39	-1.9
1,886,647	+		AO353_08585	0.39	+0.6
1,886,722	+		AO353_08585	0.44	-0.7
1,886,722	+		AO353_08585	0.44	+2.2
1,886,722	+		AO353_08585	0.44	+1.2
1,886,722	+		AO353_08585	0.44	-0.9
1,886,723	-		AO353_08585	0.45	+2.1
1,886,723	-		AO353_08585	0.45	+0.5
1,886,723	-		AO353_08585	0.45	-1.3
1,886,723	-		AO353_08585	0.45	+2.0
1,886,723	-		AO353_08585	0.45	-1.0
1,886,755	+		AO353_08585	0.47	-2.3
1,886,755	+		AO353_08585	0.47	+0.6
1,886,755	+		AO353_08585	0.47	+0.1
1,886,756	-		AO353_08585	0.47	+1.1
1,886,756	-		AO353_08585	0.47	-0.5
1,886,756	-		AO353_08585	0.47	+0.3
1,886,806	-		AO353_08585	0.51	+1.6
1,886,873	+		AO353_08585	0.56	-0.7
1,886,974	+		AO353_08585	0.63	+1.5
1,886,974	+		AO353_08585	0.63	-1.2
1,886,974	+		AO353_08585	0.63	+0.9
1,886,974	+		AO353_08585	0.63	-0.1
1,886,974	+		AO353_08585	0.63	+2.0
1,886,974	+		AO353_08585	0.63	-3.7
1,886,974	+		AO353_08585	0.63	-1.0
1,886,974	+		AO353_08585	0.63	-0.3
1,886,974	+		AO353_08585	0.63	+0.9
1,886,974	+		AO353_08585	0.63	+1.3
1,886,974	+		AO353_08585	0.63	-1.2
1,886,974	+		AO353_08585	0.63	-1.2
1,886,974	+		AO353_08585	0.63	+0.3
1,886,974	+		AO353_08585	0.63	+0.0
1,886,974	+		AO353_08585	0.63	-0.2
1,886,974	+		AO353_08585	0.63	-0.7
1,886,974	+		AO353_08585	0.63	+1.1
1,886,974	+		AO353_08585	0.63	-0.5
1,886,974	+		AO353_08585	0.63	+0.9
1,886,974	+		AO353_08585	0.63	+0.7
1,886,974	+		AO353_08585	0.63	-1.9
1,886,974	+		AO353_08585	0.63	+0.5
1,886,974	+		AO353_08585	0.63	+1.0
1,886,974	+		AO353_08585	0.63	+1.9
1,886,974	+		AO353_08585	0.63	+1.1
1,886,975	-		AO353_08585	0.63	+3.1
1,886,975	-		AO353_08585	0.63	+0.2
1,886,975	-		AO353_08585	0.63	-1.7
1,886,975	-		AO353_08585	0.63	+4.3
1,886,975	-		AO353_08585	0.63	-0.7
1,886,975	-		AO353_08585	0.63	+2.5
1,886,975	-		AO353_08585	0.63	+1.6
1,886,975	-		AO353_08585	0.63	+0.5
1,886,975	-		AO353_08585	0.63	+2.3
1,886,975	-		AO353_08585	0.63	+2.9
1,886,975	-		AO353_08585	0.63	+1.2
1,886,975	-		AO353_08585	0.63	-0.3
1,886,975	-		AO353_08585	0.63	+2.6
1,886,975	-		AO353_08585	0.63	+1.8
1,886,975	-		AO353_08585	0.63	+2.2
1,887,089	+		AO353_08585	0.71	+1.6
1,887,089	+		AO353_08585	0.71	+0.7
1,887,089	+		AO353_08585	0.71	+1.0
1,887,090	-		AO353_08585	0.71	-0.7
1,887,223	+		AO353_08585	0.81	+0.4
1,887,223	+		AO353_08585	0.81	-2.3
1,887,223	+		AO353_08585	0.81	-1.8
1,887,223	+		AO353_08585	0.81	-2.7
1,887,223	+		AO353_08585	0.81	+1.8
1,887,223	+		AO353_08585	0.81	+1.4
1,887,223	+		AO353_08585	0.81	+0.1
1,887,223	+		AO353_08585	0.81	+1.4
1,887,223	+		AO353_08585	0.81	+2.2
1,887,223	+		AO353_08585	0.81	+1.3
1,887,223	+		AO353_08585	0.81	+1.4
1,887,223	+		AO353_08585	0.81	+2.6
1,887,223	+		AO353_08585	0.81	+0.2
1,887,223	+		AO353_08585	0.81	+0.1
1,887,223	+		AO353_08585	0.81	+1.3
1,887,224	-		AO353_08585	0.81	+1.2
1,887,224	-		AO353_08585	0.81	+0.9
1,887,224	-		AO353_08585	0.81	+1.5
1,887,224	-		AO353_08585	0.81	+1.5
1,887,224	-		AO353_08585	0.81	+2.5
1,887,224	-		AO353_08585	0.81	+1.5
1,887,224	-		AO353_08585	0.81	+1.4
1,887,224	-		AO353_08585	0.81	-0.9
1,887,224	-		AO353_08585	0.81	-0.7
1,887,224	-		AO353_08585	0.81	-0.1
1,887,224	-		AO353_08585	0.81	+0.6
1,887,224	-		AO353_08585	0.81	+1.8
1,887,224	-		AO353_08585	0.81	+0.5
1,887,224	-		AO353_08585	0.81	-0.3
1,887,224	-		AO353_08585	0.81	-0.1
1,887,226	+		AO353_08585	0.81	+0.1
1,887,226	+		AO353_08585	0.81	-0.9
1,887,226	+		AO353_08585	0.81	-0.2
1,887,226	+		AO353_08585	0.81	+2.1
1,887,227	-		AO353_08585	0.81	-0.2
1,887,227	-		AO353_08585	0.81	+1.6
1,887,329	+		AO353_08585	0.89	-2.5
1,887,329	+		AO353_08585	0.89	+1.3
1,887,329	+		AO353_08585	0.89	-1.7
1,887,330	-		AO353_08585	0.89	+1.0
1,887,349	+				+0.2
1,887,349	+				-1.5
1,887,350	-				+1.4
1,887,350	-				+1.7
1,887,350	-				+0.9
1,887,350	-				+1.8
1,887,479	+				+0.2
1,887,479	+				-2.5
1,887,479	+				-0.7
1,887,479	+				+1.4
1,887,479	+				+0.8
1,887,479	+				+1.0
1,887,479	+				+0.4
1,887,479	+				-1.2
1,887,480	-				+0.3
1,887,480	-				+1.0
1,887,480	-				-1.6
1,887,480	-				-0.9
1,887,480	-				+0.1
1,887,480	-				+1.6
1,887,480	-				+0.2
1,887,480	-				-0.4
1,887,491	+				+2.3
1,887,491	+				-0.7
1,887,492	-				+3.0
1,887,492	-				+3.4
1,887,493	+				+0.8
1,887,493	+				-1.9
1,887,493	+				+0.9
1,887,493	+				+0.8
1,887,493	+				+0.4
1,887,493	+				+0.7
1,887,493	+				+2.5
1,887,493	+				-0.9
1,887,493	+				-0.7
1,887,494	-				+3.3
1,887,494	-				+2.6
1,887,494	-				+2.5
1,887,494	-				+3.4
1,887,494	-				+1.7
1,887,494	-				+4.6
1,887,618	+				-1.1
1,887,645	+				-0.4
1,887,645	+				+0.1
1,887,645	+				+2.1
1,887,645	+				+0.7
1,887,646	-				+1.9
1,887,646	-				-0.7
1,887,646	-				+0.1
1,887,646	-				+3.0
1,887,646	-				+2.4
1,887,646	-				+3.6
1,887,781	-		AO353_08590	0.18	+2.1
1,887,813	+		AO353_08590	0.21	+3.0
1,887,813	+		AO353_08590	0.21	-0.1
1,887,813	+		AO353_08590	0.21	-0.3
1,887,813	+		AO353_08590	0.21	+1.3
1,887,813	+		AO353_08590	0.21	-2.5
1,887,814	-		AO353_08590	0.21	-0.7
1,887,814	-		AO353_08590	0.21	+2.1
1,887,814	-		AO353_08590	0.21	+1.1
1,888,326	+		AO353_08590	0.58	-2.2
1,888,327	-		AO353_08590	0.58	+3.0
1,888,327	-		AO353_08590	0.58	+0.1
1,888,369	+		AO353_08590	0.62	+1.7
1,888,369	+		AO353_08590	0.62	+1.1
1,888,370	-		AO353_08590	0.62	+2.2
1,888,370	-		AO353_08590	0.62	+2.7
1,888,370	-		AO353_08590	0.62	+1.3
1,888,370	-		AO353_08590	0.62	+4.3
1,888,370	-		AO353_08590	0.62	+2.1
1,888,370	-		AO353_08590	0.62	+2.5
1,888,461	+		AO353_08590	0.68	+1.6
1,888,461	+		AO353_08590	0.68	+0.9
1,888,461	+		AO353_08590	0.68	-2.1
1,888,461	+		AO353_08590	0.68	-1.6
1,888,462	-		AO353_08590	0.68	+3.1
1,888,575	+		AO353_08590	0.77	-1.9
1,888,575	+		AO353_08590	0.77	+1.5
1,888,575	+		AO353_08590	0.77	-0.9
1,888,575	+		AO353_08590	0.77	+0.2
1,888,575	+		AO353_08590	0.77	-2.4
1,888,575	+		AO353_08590	0.77	+2.7
1,888,575	+		AO353_08590	0.77	-0.8
1,888,576	-		AO353_08590	0.77	+1.8
1,888,576	-		AO353_08590	0.77	+2.3
1,888,576	-		AO353_08590	0.77	+2.3
1,888,576	-		AO353_08590	0.77	+0.5
1,888,576	-		AO353_08590	0.77	+3.3
1,888,576	-		AO353_08590	0.77	+1.1
1,888,628	+		AO353_08590	0.81	-0.6
1,888,686	+		AO353_08590	0.85	+0.4
1,888,686	+		AO353_08590	0.85	-1.4
1,888,687	-		AO353_08590	0.85	+0.7
1,888,689	+		AO353_08590	0.85	+1.1
1,888,689	+		AO353_08590	0.85	-1.5
1,888,689	+		AO353_08590	0.85	-1.7
1,888,689	+		AO353_08590	0.85	-0.9
1,888,689	+		AO353_08590	0.85	+0.2
1,888,689	+		AO353_08590	0.85	+2.0
1,888,689	+		AO353_08590	0.85	+0.9
1,888,689	+		AO353_08590	0.85	-0.9
1,888,690	-		AO353_08590	0.85	+2.0
1,888,690	-		AO353_08590	0.85	+2.1
1,888,690	-		AO353_08590	0.85	+2.4
1,888,690	-		AO353_08590	0.85	+2.3
1,888,690	-		AO353_08590	0.85	+1.4
1,888,690	-		AO353_08590	0.85	-1.4
1,888,690	-		AO353_08590	0.85	+1.8
1,888,707	+		AO353_08590	0.86	-1.9
1,888,707	+		AO353_08590	0.86	+0.8
1,888,707	+		AO353_08590	0.86	-1.9
1,888,707	+		AO353_08590	0.86	-0.7
1,888,707	+		AO353_08590	0.86	+0.1
1,888,707	+		AO353_08590	0.86	+1.9
1,888,707	+		AO353_08590	0.86	+1.5
1,888,708	-		AO353_08590	0.86	+1.3
1,888,708	-		AO353_08590	0.86	+3.2
1,888,708	-		AO353_08590	0.86	+1.4
1,888,708	-		AO353_08590	0.86	+2.8
1,888,708	-		AO353_08590	0.86	+2.4
1,888,708	-		AO353_08590	0.86	+1.6
1,888,727	+		AO353_08590	0.88	-1.2
1,888,727	+		AO353_08590	0.88	-1.1
1,888,727	+		AO353_08590	0.88	-0.1
1,888,728	-		AO353_08590	0.88	+2.5
1,888,728	-		AO353_08590	0.88	+0.3
1,888,728	-		AO353_08590	0.88	+0.6
1,888,885	+				-0.6
1,888,886	-				+3.1
1,888,886	-				+2.2
1,888,886	-				+1.9
1,888,886	-				+0.9
1,888,886	-				+2.6
1,888,891	+				-0.9
1,888,891	+				+0.4
1,888,891	+				-0.1
1,888,891	+				-2.6
1,888,891	+				-0.6
1,888,891	+				+0.1
1,888,892	-				+2.4
1,888,892	-				+0.9
1,888,892	-				-1.4
1,888,892	-				+1.7
1,888,892	-				+2.6
1,888,892	-				-1.4
1,888,892	-				+2.7
1,888,924	+				-1.1
1,888,924	+				+0.8
1,888,925	-				-1.7
1,888,963	+				-1.6
1,888,963	+				-1.6
1,888,963	+				-0.7
1,888,963	+				-0.2
1,888,963	+				+3.1
1,888,963	+				-2.3
1,888,963	+				+0.8
1,888,964	-				+2.0
1,888,964	-				+2.0
1,888,984	+				+3.1
1,888,984	+				+0.4
1,888,998	+				+1.4
1,889,052	+				+0.3
1,889,053	-				+2.8
1,889,053	-				+2.7
1,889,055	-				+2.8
1,889,068	+				-1.0
1,889,068	+				+0.9
1,889,068	+				+1.0
1,889,068	+				-1.5
1,889,068	+				-3.2
1,889,068	+				+0.9
1,889,068	+				-1.7
1,889,069	-				+2.8
1,889,069	-				+2.3
1,889,069	-				+1.2
1,889,069	-				+2.1
1,889,069	-				+2.8
1,889,069	-				+3.5
1,889,069	-				+2.3
1,889,069	-				+2.7
1,889,069	-				+2.8
1,889,073	+				-0.1
1,889,073	+				-1.1
1,889,073	+				+1.7
1,889,074	-				+2.3
1,889,074	-				+1.9
1,889,074	-				+3.9
1,889,074	-				+0.9
1,889,074	-				+3.3
1,889,115	+				-1.6
1,889,115	+				-1.2
1,889,115	+				-0.5
1,889,115	+				-0.7
1,889,116	-				+2.6
1,889,116	-				+1.3
1,889,118	+				+1.4
1,889,198	+				+1.1
1,889,198	+				-1.1
1,889,198	+				-1.1
1,889,198	+				-0.1
1,889,198	+				-0.1
1,889,198	+				-1.8
1,889,198	+				+0.1
1,889,198	+				-1.9
1,889,198	+				-1.2
1,889,198	+				+2.9
1,889,198	+				-0.9
1,889,199	-				+2.3
1,889,199	-				+3.4
1,889,199	-				+3.1
1,889,199	-				+1.0
1,889,199	-				+1.0
1,889,202	+				+0.0
1,889,202	+				-1.1
1,889,219	+				-0.5
1,889,219	+				-1.9
1,889,219	+				+0.1
1,889,219	+				-1.4
1,889,219	+				-1.6
1,889,220	-				-1.6
1,889,220	-				-0.9
1,889,220	-				+2.0
1,889,296	+				-1.7
1,889,296	+				+1.5
1,889,296	+				-1.1
1,889,296	+				-1.6
1,889,296	+				-0.9
1,889,296	+				-1.5
1,889,297	-				+1.7
1,889,297	-				-1.5
1,889,297	-				+1.3
1,889,297	-				+0.6
1,889,297	-				-0.1
1,889,305	+				-1.3
1,889,305	+				+0.9
1,889,306	-				+1.4
1,889,324	+				-1.3
1,889,324	+				-2.4
1,889,325	-				+1.8
1,889,413	-				+2.6
1,889,632	-				-2.5
1,889,632	-				-0.3
1,889,632	-				+0.2
1,889,632	-				-1.0
1,889,655	-				-1.8
1,889,740	+		AO353_08595	0.13	-0.9
1,889,740	+				+0.9
1,889,741	-		AO353_08595	0.13	-3.4
1,889,741	-				+0.9
1,889,741	-		AO353_08595	0.13	-0.5
1,889,741	-		AO353_08595	0.13	+1.3
1,889,741	-		AO353_08595	0.13	-0.3
1,889,823	-		AO353_08595	0.19	-0.8
1,889,834	+		AO353_08595	0.20	+1.5
1,889,834	+		AO353_08595	0.20	+3.2