Experiment: Furfuryl Alcohol 0.075 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_3675 and Shew_3676 are separated by 9 nucleotides Shew_3676 and Shew_3677 are separated by 390 nucleotides
Shew_3675: Shew_3675 - ABC transporter-related protein (RefSeq), at 4,376,224 to 4,377,588
_3675
Shew_3676: Shew_3676 - TonB-dependent receptor, plug (RefSeq), at 4,377,598 to 4,379,805
_3676
Shew_3677: Shew_3677 - isochorismate synthase (RefSeq), at 4,380,196 to 4,381,554
_3677
Position (kb)
4377
4378
4379
4380 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4376.878 kb on + strand, within Shew_3675 at 4376.942 kb on + strand, within Shew_3675 at 4376.996 kb on - strand, within Shew_3675 at 4377.081 kb on - strand, within Shew_3675 at 4377.219 kb on + strand, within Shew_3675 at 4377.219 kb on + strand, within Shew_3675 at 4377.227 kb on - strand, within Shew_3675 at 4377.817 kb on - strand at 4377.821 kb on - strand, within Shew_3676 at 4378.056 kb on - strand, within Shew_3676 at 4378.114 kb on + strand, within Shew_3676 at 4378.164 kb on + strand, within Shew_3676 at 4378.172 kb on - strand, within Shew_3676 at 4378.216 kb on - strand, within Shew_3676 at 4378.297 kb on + strand, within Shew_3676 at 4378.357 kb on + strand, within Shew_3676 at 4378.537 kb on + strand, within Shew_3676 at 4379.108 kb on - strand, within Shew_3676 at 4379.157 kb on - strand, within Shew_3676 at 4379.162 kb on + strand, within Shew_3676 at 4379.475 kb on - strand, within Shew_3676 at 4379.739 kb on + strand at 4379.757 kb on - strand at 4379.954 kb on + strand at 4379.956 kb on + strand at 4379.985 kb on + strand at 4380.213 kb on + strand at 4380.394 kb on + strand, within Shew_3677 at 4380.573 kb on + strand, within Shew_3677
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.075 vol% remove 4,376,878 + Shew_3675 0.48 +0.8 4,376,942 + Shew_3675 0.53 +0.2 4,376,996 - Shew_3675 0.57 +0.4 4,377,081 - Shew_3675 0.63 +0.7 4,377,219 + Shew_3675 0.73 +1.0 4,377,219 + Shew_3675 0.73 -0.1 4,377,227 - Shew_3675 0.73 +0.4 4,377,817 - +0.3 4,377,821 - Shew_3676 0.10 -1.0 4,378,056 - Shew_3676 0.21 +0.1 4,378,114 + Shew_3676 0.23 -0.5 4,378,164 + Shew_3676 0.26 -4.5 4,378,172 - Shew_3676 0.26 +0.2 4,378,216 - Shew_3676 0.28 +0.2 4,378,297 + Shew_3676 0.32 +0.3 4,378,357 + Shew_3676 0.34 +0.6 4,378,537 + Shew_3676 0.43 -1.2 4,379,108 - Shew_3676 0.68 +0.0 4,379,157 - Shew_3676 0.71 +0.5 4,379,162 + Shew_3676 0.71 -0.3 4,379,475 - Shew_3676 0.85 -0.1 4,379,739 + +0.0 4,379,757 - +0.2 4,379,954 + +0.6 4,379,956 + +0.7 4,379,985 + +0.9 4,380,213 + +0.9 4,380,394 + Shew_3677 0.15 +0.2 4,380,573 + Shew_3677 0.28 -0.1
Or see this region's nucleotide sequence