Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3392

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,909,167	+		Rru_A3391	0.49	+0.3
3,909,167	+		Rru_A3391	0.49	+1.2
3,909,168	-		Rru_A3391	0.49	+0.6
3,909,173	+		Rru_A3391	0.50	+0.7
3,909,173	+		Rru_A3391	0.50	+0.9
3,909,173	+		Rru_A3391	0.50	+0.3
3,909,173	+		Rru_A3391	0.50	+0.7
3,909,173	+		Rru_A3391	0.50	+1.2
3,909,173	+		Rru_A3391	0.50	+2.4
3,909,173	+		Rru_A3391	0.50	+0.0
3,909,174	-		Rru_A3391	0.50	+3.2
3,909,174	-		Rru_A3391	0.50	+1.0
3,909,174	-		Rru_A3391	0.50	+1.0
3,909,174	-		Rru_A3391	0.50	+0.0
3,909,174	-		Rru_A3391	0.50	+1.7
3,909,432	+		Rru_A3391	0.74	+2.9
3,909,432	+		Rru_A3391	0.74	+1.8
3,909,432	+		Rru_A3391	0.74	+1.1
3,909,432	+		Rru_A3391	0.74	+1.1
3,909,433	-		Rru_A3391	0.74	+0.0
3,909,433	-		Rru_A3391	0.74	+0.0
3,909,539	+		Rru_A3391	0.84	+1.7
3,909,540	-		Rru_A3391	0.84	+2.4
3,909,737	+				+0.0
3,909,738	-				+1.4
3,909,764	+				+3.7
3,909,765	-				+0.8
3,909,862	-		Rru_A3392	0.18	+1.7
3,909,862	-		Rru_A3392	0.18	+1.6
3,909,882	+		Rru_A3392	0.24	+2.0
3,909,882	+		Rru_A3392	0.24	+2.2
3,909,882	+		Rru_A3392	0.24	-1.0
3,909,883	-		Rru_A3392	0.24	+0.2
3,909,883	-		Rru_A3392	0.24	+2.3
3,909,980	+		Rru_A3392	0.50	+2.1
3,910,051	+		Rru_A3392	0.69	+0.0
3,910,052	-		Rru_A3392	0.69	+0.0
3,910,084	+		Rru_A3392	0.78	+2.3
3,910,124	-		Rru_A3392	0.89	+0.0
3,910,124	-		Rru_A3392	0.89	+0.0
3,910,304	-				+1.8
3,910,486	+		Rru_A3393	0.14	+0.0
3,910,487	-		Rru_A3393	0.14	+0.0
3,910,487	-		Rru_A3393	0.14	+0.0
3,910,487	-		Rru_A3393	0.14	+0.0
3,910,954	-		Rru_A3393	0.38	+0.0