Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3539

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
4,070,356	+				+0.0
4,070,356	+				+0.0
4,070,356	+				+0.0
4,070,356	+				+0.0
4,070,357	-				-0.3
4,070,357	-				-0.6
4,070,357	-				-0.7
4,070,383	+				+2.2
4,070,384	-				+0.0
4,070,613	+		Rru_A3539	0.15	+0.0
4,070,614	-		Rru_A3539	0.15	+0.0
4,070,614	-		Rru_A3539	0.15	+0.0
4,070,614	-		Rru_A3539	0.15	+0.0
4,070,697	-		Rru_A3539	0.18	+0.0
4,070,697	-		Rru_A3539	0.18	+0.0
4,070,739	+		Rru_A3539	0.19	+0.6
4,070,740	-		Rru_A3539	0.19	+1.6
4,070,740	-		Rru_A3539	0.19	+0.0
4,070,744	+		Rru_A3539	0.20	+0.4
4,070,744	+		Rru_A3539	0.20	+0.5
4,070,745	-		Rru_A3539	0.20	+0.6
4,070,745	-		Rru_A3539	0.20	+0.0
4,070,941	+		Rru_A3539	0.27	+0.0
4,071,024	-		Rru_A3539	0.30	+0.0
4,071,269	+		Rru_A3539	0.38	+0.0
4,071,269	+		Rru_A3539	0.38	+0.0
4,071,269	+		Rru_A3539	0.38	+0.0
4,071,269	+		Rru_A3539	0.38	+0.0
4,071,269	+		Rru_A3539	0.38	-1.2
4,071,270	-		Rru_A3539	0.38	+0.0
4,071,422	-		Rru_A3539	0.44	+0.0
4,071,546	-		Rru_A3539	0.48	-1.0
4,071,547	+		Rru_A3539	0.48	-0.7
4,071,547	+		Rru_A3539	0.48	+0.0
4,071,547	+		Rru_A3539	0.48	-1.8
4,071,547	+		Rru_A3539	0.48	+1.0
4,071,556	+		Rru_A3539	0.48	+2.0
4,071,556	+		Rru_A3539	0.48	-1.7
4,072,121	-		Rru_A3539	0.69	+0.0
4,072,239	-		Rru_A3539	0.73	-1.0
4,073,060	+				+0.0
4,073,060	+				+0.8
4,073,060	+				+0.0
4,073,060	+				+0.0
4,073,060	+				+1.5
4,073,060	+				+1.0
4,073,060	+				+1.3
4,073,061	-				+0.0
4,073,061	-				-1.0
4,073,061	-				+1.1
4,073,061	-				+0.0
4,073,062	+				+1.1
4,073,062	+				+1.1
4,073,062	+				+1.1
4,073,062	+				+0.0
4,073,063	-				+1.0
4,073,063	-				+0.0
4,073,063	-				+1.4
4,073,063	-				+0.8
4,073,063	-				+0.0
4,073,113	-				+0.0
4,073,182	+				+1.1
4,073,182	+				+1.2
4,073,182	+				+0.6
4,073,182	+				+0.4
4,073,182	+				+0.0
4,073,182	+				+1.1
4,073,183	-				+1.0
4,073,183	-				+1.2
4,073,183	-				+0.9
4,073,183	-				-0.8
4,073,183	-				+0.7
4,073,183	-				+0.8
4,073,183	-				+0.0
4,073,192	-				-0.1
4,073,376	+		Rru_A3540	0.37	+0.0
4,073,377	-		Rru_A3540	0.38	+0.0
4,073,377	-		Rru_A3540	0.38	+0.2
4,073,377	-		Rru_A3540	0.38	+0.5
4,073,382	-		Rru_A3540	0.39	+0.9
4,073,634	+				+0.0
4,073,707	+				+0.0