Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2415

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,815,641	+		Rru_A2413	0.80	-0.1
2,815,641	+		Rru_A2413	0.80	-1.1
2,815,642	-		Rru_A2413	0.80	+2.0
2,815,642	-		Rru_A2413	0.80	+1.3
2,815,707	+		Rru_A2413	0.84	+1.3
2,815,707	+		Rru_A2413	0.84	+1.6
2,815,708	-		Rru_A2413	0.84	+2.0
2,815,749	-		Rru_A2413	0.86	+2.0
2,815,781	+		Rru_A2413	0.88	+1.8
2,815,781	+		Rru_A2413	0.88	-0.1
2,815,782	-		Rru_A2413	0.88	-0.1
2,815,785	+		Rru_A2413	0.88	+2.5
2,815,785	+		Rru_A2413	0.88	-0.1
2,815,785	+		Rru_A2413	0.88	+2.6
2,815,786	-		Rru_A2413	0.88	+2.0
2,815,802	+		Rru_A2413	0.89	-0.1
2,815,803	-		Rru_A2413	0.89	-0.1
2,815,971	+				-0.1
2,815,971	+				+4.0
2,815,972	-				-0.1
2,815,992	+				+1.7
2,816,078	-				+2.3
2,816,195	+		Rru_A2414	0.30	+0.9
2,816,473	+				-0.1
2,816,479	+				-0.1
2,816,479	+				+1.1
2,816,480	-				+0.7
2,816,480	-				-1.0
2,816,480	-				+1.1
2,816,480	-				+1.5
2,816,496	+				-0.1
2,816,496	+				+1.6
2,816,496	+				+0.8
2,816,496	+				-1.1
2,816,496	+				+0.1
2,816,496	+				-2.1
2,816,497	-				-0.1
2,816,497	-				-0.1
2,816,497	-				+0.6
2,816,497	-				+0.8
2,816,497	-				+0.5
2,816,497	-				+0.3
2,816,497	-				-0.1
2,816,497	-				+1.2
2,816,500	+				-1.1
2,816,500	+				-0.1
2,816,500	+				+1.2
2,816,501	-				+1.2
2,816,501	-				+1.1
2,816,501	-				+0.7
2,816,507	+				-0.1
2,816,508	-				+1.2
2,816,539	+				-0.2
2,816,644	+		Rru_A2415	0.47	-0.1
2,816,644	+		Rru_A2415	0.47	-1.1
2,816,645	-		Rru_A2415	0.47	+0.3
2,816,738	+				-0.1
2,816,818	-		Rru_A2416	0.24	-0.1
2,816,818	-		Rru_A2416	0.24	+1.7
2,816,952	+		Rru_A2416	0.60	-0.1
2,817,186	-				+0.8
2,817,187	+				+0.9
2,817,187	+				+1.4
2,817,187	+				-1.1
2,817,187	+				-0.1
2,817,187	+				-0.1
2,817,187	+				+1.3
2,817,187	+				-0.1
2,817,187	+				-0.1
2,817,187	+				-1.1
2,817,187	+				+1.1
2,817,187	-				-0.1
2,817,188	-				+1.7
2,817,188	-				+0.8
2,817,188	-				+2.0
2,817,188	-				-0.1
2,817,188	-				-0.1
2,817,188	-				-0.1
2,817,188	-				+0.7
2,817,226	+				+1.5
2,817,226	+				+2.4
2,817,226	+				-0.1
2,817,226	+				+1.5
2,817,294	-		Rru_A2417	0.17	-0.1
2,817,294	-		Rru_A2417	0.17	+1.2
2,817,294	-		Rru_A2417	0.17	+1.2
2,817,295	+		Rru_A2417	0.17	-0.1
2,817,295	+		Rru_A2417	0.17	+1.3
2,817,295	+		Rru_A2417	0.17	+1.2
2,817,296	-		Rru_A2417	0.17	-0.5
2,817,361	+		Rru_A2417	0.26	+1.7
2,817,362	-		Rru_A2417	0.26	-0.1
2,817,362	-		Rru_A2417	0.26	-0.1
2,817,362	-		Rru_A2417	0.26	+1.1
2,817,362	-		Rru_A2417	0.26	+1.8
2,817,362	-		Rru_A2417	0.26	+1.1
2,817,362	-		Rru_A2417	0.26	+1.2
2,817,362	-		Rru_A2417	0.26	-0.1
2,817,362	-		Rru_A2417	0.26	-0.1
2,817,362	-		Rru_A2417	0.26	+1.6
2,817,665	+		Rru_A2417	0.64	+1.5
2,817,665	+		Rru_A2417	0.64	+0.8
2,817,666	-		Rru_A2417	0.64	+0.6
2,817,666	-		Rru_A2417	0.64	+1.2
2,817,666	-		Rru_A2417	0.64	+1.5
2,817,668	-		Rru_A2417	0.65	-0.1
2,817,697	+		Rru_A2417	0.68	+0.8
2,817,698	-		Rru_A2417	0.68	+1.3
2,817,698	-		Rru_A2417	0.68	+1.1