Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27520 and BWI76_RS27525 are separated by 287 nucleotides BWI76_RS27525 and BWI76_RS27530 are separated by 145 nucleotides
BWI76_RS27520: BWI76_RS27520 - sodium/glutamate symporter, at 5,709,926 to 5,711,128
_RS27520
BWI76_RS27525: BWI76_RS27525 - xanthine permease XanP, at 5,711,416 to 5,712,807
_RS27525
BWI76_RS27530: BWI76_RS27530 - AsmA family protein, at 5,712,953 to 5,714,668
_RS27530
Position (kb)
5711
5712
5713 Strain fitness (log2 ratio)
-2
-1
0
1 at 5710.443 kb on - strand, within BWI76_RS27520 at 5710.891 kb on + strand, within BWI76_RS27520 at 5711.140 kb on + strand at 5711.399 kb on + strand at 5711.513 kb on + strand at 5711.541 kb on - strand at 5711.593 kb on + strand, within BWI76_RS27525 at 5711.601 kb on - strand, within BWI76_RS27525 at 5711.601 kb on - strand, within BWI76_RS27525 at 5711.601 kb on - strand, within BWI76_RS27525 at 5711.696 kb on + strand, within BWI76_RS27525 at 5711.706 kb on + strand, within BWI76_RS27525 at 5711.734 kb on - strand, within BWI76_RS27525 at 5711.756 kb on - strand, within BWI76_RS27525 at 5711.780 kb on + strand, within BWI76_RS27525 at 5711.819 kb on - strand, within BWI76_RS27525 at 5711.837 kb on + strand, within BWI76_RS27525 at 5711.842 kb on - strand, within BWI76_RS27525 at 5711.842 kb on - strand, within BWI76_RS27525 at 5711.845 kb on - strand, within BWI76_RS27525 at 5711.848 kb on + strand, within BWI76_RS27525 at 5711.888 kb on - strand, within BWI76_RS27525 at 5711.908 kb on + strand, within BWI76_RS27525 at 5711.952 kb on - strand, within BWI76_RS27525 at 5711.990 kb on + strand, within BWI76_RS27525 at 5712.073 kb on - strand, within BWI76_RS27525 at 5712.195 kb on + strand, within BWI76_RS27525 at 5712.197 kb on + strand, within BWI76_RS27525 at 5712.197 kb on + strand, within BWI76_RS27525 at 5712.203 kb on - strand, within BWI76_RS27525 at 5712.228 kb on - strand, within BWI76_RS27525 at 5712.390 kb on + strand, within BWI76_RS27525 at 5712.398 kb on - strand, within BWI76_RS27525 at 5712.398 kb on - strand, within BWI76_RS27525 at 5712.408 kb on + strand, within BWI76_RS27525 at 5712.424 kb on + strand, within BWI76_RS27525 at 5712.482 kb on + strand, within BWI76_RS27525 at 5712.578 kb on - strand, within BWI76_RS27525 at 5712.578 kb on - strand, within BWI76_RS27525 at 5712.630 kb on - strand, within BWI76_RS27525 at 5712.713 kb on - strand at 5712.811 kb on + strand at 5712.884 kb on + strand at 5712.891 kb on + strand at 5713.037 kb on - strand at 5713.298 kb on - strand, within BWI76_RS27530 at 5713.306 kb on - strand, within BWI76_RS27530 at 5713.328 kb on - strand, within BWI76_RS27530 at 5713.362 kb on + strand, within BWI76_RS27530 at 5713.370 kb on - strand, within BWI76_RS27530 at 5713.546 kb on - strand, within BWI76_RS27530 at 5713.586 kb on + strand, within BWI76_RS27530 at 5713.716 kb on + strand, within BWI76_RS27530 at 5713.724 kb on - strand, within BWI76_RS27530 at 5713.744 kb on - strand, within BWI76_RS27530 at 5713.744 kb on - strand, within BWI76_RS27530 at 5713.781 kb on - strand, within BWI76_RS27530 at 5713.781 kb on - strand, within BWI76_RS27530 at 5713.781 kb on - strand, within BWI76_RS27530 at 5713.781 kb on - strand, within BWI76_RS27530 at 5713.781 kb on - strand, within BWI76_RS27530 at 5713.788 kb on + strand, within BWI76_RS27530 at 5713.801 kb on - strand, within BWI76_RS27530
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 5,710,443 - BWI76_RS27520 0.43 +0.8 5,710,891 + BWI76_RS27520 0.80 +0.4 5,711,140 + -0.5 5,711,399 + -1.6 5,711,513 + +0.1 5,711,541 - -0.4 5,711,593 + BWI76_RS27525 0.13 -0.2 5,711,601 - BWI76_RS27525 0.13 +0.5 5,711,601 - BWI76_RS27525 0.13 -0.6 5,711,601 - BWI76_RS27525 0.13 -0.2 5,711,696 + BWI76_RS27525 0.20 +1.7 5,711,706 + BWI76_RS27525 0.21 -1.7 5,711,734 - BWI76_RS27525 0.23 -0.4 5,711,756 - BWI76_RS27525 0.24 -0.2 5,711,780 + BWI76_RS27525 0.26 -0.5 5,711,819 - BWI76_RS27525 0.29 -0.2 5,711,837 + BWI76_RS27525 0.30 -1.5 5,711,842 - BWI76_RS27525 0.31 -1.6 5,711,842 - BWI76_RS27525 0.31 -0.1 5,711,845 - BWI76_RS27525 0.31 -0.3 5,711,848 + BWI76_RS27525 0.31 -0.7 5,711,888 - BWI76_RS27525 0.34 -0.3 5,711,908 + BWI76_RS27525 0.35 -2.1 5,711,952 - BWI76_RS27525 0.39 +0.5 5,711,990 + BWI76_RS27525 0.41 +0.5 5,712,073 - BWI76_RS27525 0.47 -1.5 5,712,195 + BWI76_RS27525 0.56 -0.1 5,712,197 + BWI76_RS27525 0.56 -1.5 5,712,197 + BWI76_RS27525 0.56 -0.1 5,712,203 - BWI76_RS27525 0.57 +0.4 5,712,228 - BWI76_RS27525 0.58 +0.3 5,712,390 + BWI76_RS27525 0.70 -0.5 5,712,398 - BWI76_RS27525 0.71 +1.2 5,712,398 - BWI76_RS27525 0.71 +0.2 5,712,408 + BWI76_RS27525 0.71 +0.1 5,712,424 + BWI76_RS27525 0.72 -0.9 5,712,482 + BWI76_RS27525 0.77 -1.1 5,712,578 - BWI76_RS27525 0.83 -0.0 5,712,578 - BWI76_RS27525 0.83 -1.4 5,712,630 - BWI76_RS27525 0.87 -0.7 5,712,713 - +0.2 5,712,811 + -0.3 5,712,884 + +0.1 5,712,891 + +0.3 5,713,037 - +0.7 5,713,298 - BWI76_RS27530 0.20 +1.2 5,713,306 - BWI76_RS27530 0.21 -0.1 5,713,328 - BWI76_RS27530 0.22 -0.6 5,713,362 + BWI76_RS27530 0.24 -0.3 5,713,370 - BWI76_RS27530 0.24 -0.4 5,713,546 - BWI76_RS27530 0.35 +0.7 5,713,586 + BWI76_RS27530 0.37 -1.0 5,713,716 + BWI76_RS27530 0.44 +0.5 5,713,724 - BWI76_RS27530 0.45 -1.3 5,713,744 - BWI76_RS27530 0.46 -1.8 5,713,744 - BWI76_RS27530 0.46 +0.7 5,713,781 - BWI76_RS27530 0.48 +0.7 5,713,781 - BWI76_RS27530 0.48 +0.3 5,713,781 - BWI76_RS27530 0.48 +0.2 5,713,781 - BWI76_RS27530 0.48 +0.2 5,713,781 - BWI76_RS27530 0.48 -0.6 5,713,788 + BWI76_RS27530 0.49 -0.4 5,713,801 - BWI76_RS27530 0.49 +1.1
Or see this region's nucleotide sequence