Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22360 and BWI76_RS22365 overlap by 4 nucleotides BWI76_RS22365 and BWI76_RS22370 are separated by 258 nucleotides
BWI76_RS22360: BWI76_RS22360 - hydrogenase formation protein HypD, at 4,659,466 to 4,660,587
_RS22360
BWI76_RS22365: BWI76_RS22365 - hydrogenase expression/formation protein HypE, at 4,660,584 to 4,661,594
_RS22365
BWI76_RS22370: BWI76_RS22370 - transcriptional regulator FhlA, at 4,661,853 to 4,663,925
_RS22370
Position (kb)
4660
4661
4662 Strain fitness (log2 ratio)
-1
0
1 at 4659.936 kb on - strand, within BWI76_RS22360 at 4660.068 kb on + strand, within BWI76_RS22360 at 4660.101 kb on - strand, within BWI76_RS22360 at 4660.135 kb on - strand, within BWI76_RS22360 at 4660.196 kb on - strand, within BWI76_RS22360 at 4660.407 kb on + strand, within BWI76_RS22360 at 4660.615 kb on - strand at 4660.678 kb on - strand at 4661.187 kb on + strand, within BWI76_RS22365 at 4661.235 kb on + strand, within BWI76_RS22365 at 4661.416 kb on - strand, within BWI76_RS22365 at 4661.524 kb on + strand at 4661.639 kb on + strand at 4661.653 kb on - strand at 4662.124 kb on - strand, within BWI76_RS22370 at 4662.147 kb on - strand, within BWI76_RS22370 at 4662.375 kb on - strand, within BWI76_RS22370 at 4662.433 kb on + strand, within BWI76_RS22370 at 4662.439 kb on - strand, within BWI76_RS22370 at 4662.523 kb on + strand, within BWI76_RS22370 at 4662.531 kb on - strand, within BWI76_RS22370 at 4662.531 kb on - strand, within BWI76_RS22370 at 4662.560 kb on + strand, within BWI76_RS22370
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 4,659,936 - BWI76_RS22360 0.42 -0.2 4,660,068 + BWI76_RS22360 0.54 -0.2 4,660,101 - BWI76_RS22360 0.57 +0.8 4,660,135 - BWI76_RS22360 0.60 -0.6 4,660,196 - BWI76_RS22360 0.65 -0.3 4,660,407 + BWI76_RS22360 0.84 -0.8 4,660,615 - +0.2 4,660,678 - -0.3 4,661,187 + BWI76_RS22365 0.60 +0.3 4,661,235 + BWI76_RS22365 0.64 -0.2 4,661,416 - BWI76_RS22365 0.82 +1.0 4,661,524 + -0.5 4,661,639 + +0.3 4,661,653 - +0.6 4,662,124 - BWI76_RS22370 0.13 -0.2 4,662,147 - BWI76_RS22370 0.14 +0.9 4,662,375 - BWI76_RS22370 0.25 +0.3 4,662,433 + BWI76_RS22370 0.28 +0.8 4,662,439 - BWI76_RS22370 0.28 +0.8 4,662,523 + BWI76_RS22370 0.32 -0.1 4,662,531 - BWI76_RS22370 0.33 -0.9 4,662,531 - BWI76_RS22370 0.33 -1.0 4,662,560 + BWI76_RS22370 0.34 -0.2
Or see this region's nucleotide sequence