Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10840 and BWI76_RS10845 are separated by 122 nucleotides BWI76_RS10845 and BWI76_RS10850 overlap by 4 nucleotides BWI76_RS10850 and BWI76_RS10855 are separated by 78 nucleotides
BWI76_RS10840: BWI76_RS10840 - membrane protein, at 2,290,506 to 2,291,294
_RS10840
BWI76_RS10845: BWI76_RS10845 - DNA-binding response regulator, at 2,291,417 to 2,292,112
_RS10845
BWI76_RS10850: BWI76_RS10850 - two-component sensor histidine kinase, at 2,292,109 to 2,293,305
_RS10850
BWI76_RS10855: BWI76_RS10855 - RND family efflux transporter MFP subunit, at 2,293,384 to 2,294,532
_RS10855
Position (kb)
2292
2293
2294 Strain fitness (log2 ratio)
-1
0
1 at 2291.271 kb on - strand at 2291.536 kb on + strand, within BWI76_RS10845 at 2291.544 kb on - strand, within BWI76_RS10845 at 2291.617 kb on - strand, within BWI76_RS10845 at 2291.719 kb on + strand, within BWI76_RS10845 at 2291.720 kb on + strand, within BWI76_RS10845 at 2292.001 kb on - strand, within BWI76_RS10845 at 2292.097 kb on - strand at 2292.325 kb on + strand, within BWI76_RS10850 at 2292.438 kb on + strand, within BWI76_RS10850 at 2292.729 kb on + strand, within BWI76_RS10850 at 2292.958 kb on + strand, within BWI76_RS10850 at 2293.394 kb on + strand at 2293.427 kb on - strand at 2293.486 kb on + strand at 2293.656 kb on + strand, within BWI76_RS10855 at 2294.037 kb on - strand, within BWI76_RS10855
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 2,291,271 - -0.5 2,291,536 + BWI76_RS10845 0.17 -0.0 2,291,544 - BWI76_RS10845 0.18 +0.5 2,291,617 - BWI76_RS10845 0.29 -0.1 2,291,719 + BWI76_RS10845 0.43 -0.3 2,291,720 + BWI76_RS10845 0.44 -0.8 2,292,001 - BWI76_RS10845 0.84 +0.0 2,292,097 - +1.3 2,292,325 + BWI76_RS10850 0.18 +0.2 2,292,438 + BWI76_RS10850 0.27 +0.1 2,292,729 + BWI76_RS10850 0.52 +0.6 2,292,958 + BWI76_RS10850 0.71 +0.7 2,293,394 + -0.0 2,293,427 - +0.1 2,293,486 + -0.2 2,293,656 + BWI76_RS10855 0.24 +0.0 2,294,037 - BWI76_RS10855 0.57 -0.2
Or see this region's nucleotide sequence