Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2210 and Pf6N2E2_2211 are separated by 172 nucleotides Pf6N2E2_2211 and Pf6N2E2_2212 are separated by 17 nucleotides
Pf6N2E2_2210 - FIG00959535: hypothetical protein, at 2,618,124 to 2,619,323
_2210
Pf6N2E2_2211 - Hydrolase, carbon-nitrogen family, at 2,619,496 to 2,620,626
_2211
Pf6N2E2_2212 - Transcriptional regulator, AraC family, at 2,620,644 to 2,621,666
_2212
Position (kb)
2619
2620
2621 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2618.652 kb on + strand, within Pf6N2E2_2210 at 2618.652 kb on + strand, within Pf6N2E2_2210 at 2618.653 kb on - strand, within Pf6N2E2_2210 at 2618.653 kb on - strand, within Pf6N2E2_2210 at 2618.866 kb on - strand, within Pf6N2E2_2210 at 2618.866 kb on - strand, within Pf6N2E2_2210 at 2619.053 kb on - strand, within Pf6N2E2_2210 at 2619.053 kb on - strand, within Pf6N2E2_2210 at 2619.121 kb on + strand, within Pf6N2E2_2210 at 2619.122 kb on - strand, within Pf6N2E2_2210 at 2619.122 kb on - strand, within Pf6N2E2_2210 at 2619.122 kb on - strand, within Pf6N2E2_2210 at 2619.168 kb on + strand, within Pf6N2E2_2210 at 2619.168 kb on + strand, within Pf6N2E2_2210 at 2619.169 kb on - strand, within Pf6N2E2_2210 at 2619.171 kb on + strand, within Pf6N2E2_2210 at 2619.171 kb on + strand, within Pf6N2E2_2210 at 2619.171 kb on + strand, within Pf6N2E2_2210 at 2619.172 kb on - strand, within Pf6N2E2_2210 at 2619.172 kb on - strand, within Pf6N2E2_2210 at 2619.198 kb on + strand, within Pf6N2E2_2210 at 2619.198 kb on + strand, within Pf6N2E2_2210 at 2619.198 kb on + strand, within Pf6N2E2_2210 at 2619.199 kb on - strand, within Pf6N2E2_2210 at 2619.199 kb on - strand, within Pf6N2E2_2210 at 2619.199 kb on - strand, within Pf6N2E2_2210 at 2619.199 kb on - strand, within Pf6N2E2_2210 at 2619.321 kb on + strand at 2619.321 kb on + strand at 2619.391 kb on - strand at 2619.391 kb on - strand at 2619.427 kb on + strand at 2619.553 kb on + strand at 2619.553 kb on + strand at 2619.554 kb on - strand at 2619.554 kb on - strand at 2619.589 kb on + strand at 2619.590 kb on - strand at 2619.590 kb on - strand at 2619.727 kb on + strand, within Pf6N2E2_2211 at 2619.728 kb on - strand, within Pf6N2E2_2211 at 2619.835 kb on + strand, within Pf6N2E2_2211 at 2619.835 kb on + strand, within Pf6N2E2_2211 at 2619.835 kb on + strand, within Pf6N2E2_2211 at 2619.836 kb on - strand, within Pf6N2E2_2211 at 2619.836 kb on - strand, within Pf6N2E2_2211 at 2619.836 kb on - strand, within Pf6N2E2_2211 at 2619.982 kb on + strand, within Pf6N2E2_2211 at 2620.102 kb on + strand, within Pf6N2E2_2211 at 2620.102 kb on + strand, within Pf6N2E2_2211 at 2620.102 kb on + strand, within Pf6N2E2_2211 at 2620.103 kb on - strand, within Pf6N2E2_2211 at 2620.103 kb on - strand, within Pf6N2E2_2211 at 2620.103 kb on - strand, within Pf6N2E2_2211 at 2620.103 kb on - strand, within Pf6N2E2_2211 at 2620.103 kb on - strand, within Pf6N2E2_2211 at 2620.378 kb on + strand, within Pf6N2E2_2211 at 2620.380 kb on + strand, within Pf6N2E2_2211 at 2620.380 kb on + strand, within Pf6N2E2_2211 at 2620.380 kb on + strand, within Pf6N2E2_2211 at 2620.381 kb on - strand, within Pf6N2E2_2211 at 2620.381 kb on - strand, within Pf6N2E2_2211 at 2620.381 kb on - strand, within Pf6N2E2_2211 at 2620.679 kb on + strand at 2620.679 kb on + strand at 2620.679 kb on + strand at 2620.679 kb on + strand at 2620.680 kb on - strand at 2620.680 kb on - strand at 2620.794 kb on + strand, within Pf6N2E2_2212 at 2620.794 kb on + strand, within Pf6N2E2_2212 at 2620.795 kb on - strand, within Pf6N2E2_2212 at 2620.963 kb on - strand, within Pf6N2E2_2212 at 2620.974 kb on + strand, within Pf6N2E2_2212 at 2620.975 kb on - strand, within Pf6N2E2_2212 at 2621.028 kb on + strand, within Pf6N2E2_2212 at 2621.029 kb on - strand, within Pf6N2E2_2212 at 2621.029 kb on - strand, within Pf6N2E2_2212 at 2621.043 kb on + strand, within Pf6N2E2_2212 at 2621.044 kb on - strand, within Pf6N2E2_2212 at 2621.052 kb on + strand, within Pf6N2E2_2212 at 2621.052 kb on + strand, within Pf6N2E2_2212 at 2621.166 kb on + strand, within Pf6N2E2_2212 at 2621.166 kb on + strand, within Pf6N2E2_2212 at 2621.167 kb on - strand, within Pf6N2E2_2212 at 2621.167 kb on - strand, within Pf6N2E2_2212 at 2621.167 kb on - strand, within Pf6N2E2_2212 at 2621.167 kb on - strand, within Pf6N2E2_2212 at 2621.167 kb on - strand, within Pf6N2E2_2212 at 2621.526 kb on + strand, within Pf6N2E2_2212 at 2621.526 kb on + strand, within Pf6N2E2_2212 at 2621.526 kb on + strand, within Pf6N2E2_2212 at 2621.527 kb on - strand, within Pf6N2E2_2212 at 2621.527 kb on - strand, within Pf6N2E2_2212 at 2621.527 kb on - strand, within Pf6N2E2_2212 at 2621.527 kb on - strand, within Pf6N2E2_2212 at 2621.527 kb on - strand, within Pf6N2E2_2212 at 2621.527 kb on - strand, within Pf6N2E2_2212 at 2621.527 kb on - strand, within Pf6N2E2_2212 at 2621.527 kb on - strand, within Pf6N2E2_2212 at 2621.527 kb on - strand, within Pf6N2E2_2212 at 2621.530 kb on + strand, within Pf6N2E2_2212 at 2621.531 kb on - strand, within Pf6N2E2_2212 at 2621.531 kb on - strand, within Pf6N2E2_2212 at 2621.565 kb on + strand at 2621.565 kb on + strand at 2621.565 kb on + strand at 2621.566 kb on - strand at 2621.569 kb on + strand at 2621.569 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 2,618,652 + Pf6N2E2_2210 0.44 +0.6 2,618,652 + Pf6N2E2_2210 0.44 -3.5 2,618,653 - Pf6N2E2_2210 0.44 +0.0 2,618,653 - Pf6N2E2_2210 0.44 -2.2 2,618,866 - Pf6N2E2_2210 0.62 +0.5 2,618,866 - Pf6N2E2_2210 0.62 -1.7 2,619,053 - Pf6N2E2_2210 0.77 -1.2 2,619,053 - Pf6N2E2_2210 0.77 -1.4 2,619,121 + Pf6N2E2_2210 0.83 +2.4 2,619,122 - Pf6N2E2_2210 0.83 -1.7 2,619,122 - Pf6N2E2_2210 0.83 +0.0 2,619,122 - Pf6N2E2_2210 0.83 -1.4 2,619,168 + Pf6N2E2_2210 0.87 +0.7 2,619,168 + Pf6N2E2_2210 0.87 +0.8 2,619,169 - Pf6N2E2_2210 0.87 +0.0 2,619,171 + Pf6N2E2_2210 0.87 +2.1 2,619,171 + Pf6N2E2_2210 0.87 +0.5 2,619,171 + Pf6N2E2_2210 0.87 +0.8 2,619,172 - Pf6N2E2_2210 0.87 -0.2 2,619,172 - Pf6N2E2_2210 0.87 +0.9 2,619,198 + Pf6N2E2_2210 0.90 +0.5 2,619,198 + Pf6N2E2_2210 0.90 +0.3 2,619,198 + Pf6N2E2_2210 0.90 +1.0 2,619,199 - Pf6N2E2_2210 0.90 +0.0 2,619,199 - Pf6N2E2_2210 0.90 +0.7 2,619,199 - Pf6N2E2_2210 0.90 +0.6 2,619,199 - Pf6N2E2_2210 0.90 -1.6 2,619,321 + +0.7 2,619,321 + +0.1 2,619,391 - +0.3 2,619,391 - -0.2 2,619,427 + +0.2 2,619,553 + -0.3 2,619,553 + +0.7 2,619,554 - -1.1 2,619,554 - -0.2 2,619,589 + -1.9 2,619,590 - +1.2 2,619,590 - -1.8 2,619,727 + Pf6N2E2_2211 0.20 -2.6 2,619,728 - Pf6N2E2_2211 0.21 -2.1 2,619,835 + Pf6N2E2_2211 0.30 -1.7 2,619,835 + Pf6N2E2_2211 0.30 -2.5 2,619,835 + Pf6N2E2_2211 0.30 -0.4 2,619,836 - Pf6N2E2_2211 0.30 -1.4 2,619,836 - Pf6N2E2_2211 0.30 -2.6 2,619,836 - Pf6N2E2_2211 0.30 -1.2 2,619,982 + Pf6N2E2_2211 0.43 -2.3 2,620,102 + Pf6N2E2_2211 0.54 -1.4 2,620,102 + Pf6N2E2_2211 0.54 -2.6 2,620,102 + Pf6N2E2_2211 0.54 -1.9 2,620,103 - Pf6N2E2_2211 0.54 -1.4 2,620,103 - Pf6N2E2_2211 0.54 +1.3 2,620,103 - Pf6N2E2_2211 0.54 +0.6 2,620,103 - Pf6N2E2_2211 0.54 -2.1 2,620,103 - Pf6N2E2_2211 0.54 -0.5 2,620,378 + Pf6N2E2_2211 0.78 -0.7 2,620,380 + Pf6N2E2_2211 0.78 -1.4 2,620,380 + Pf6N2E2_2211 0.78 +0.3 2,620,380 + Pf6N2E2_2211 0.78 +0.0 2,620,381 - Pf6N2E2_2211 0.78 -1.0 2,620,381 - Pf6N2E2_2211 0.78 -2.7 2,620,381 - Pf6N2E2_2211 0.78 -1.4 2,620,679 + -0.7 2,620,679 + +0.3 2,620,679 + +0.1 2,620,679 + +0.8 2,620,680 - +0.6 2,620,680 - -1.1 2,620,794 + Pf6N2E2_2212 0.15 -0.3 2,620,794 + Pf6N2E2_2212 0.15 +0.4 2,620,795 - Pf6N2E2_2212 0.15 +0.6 2,620,963 - Pf6N2E2_2212 0.31 -1.1 2,620,974 + Pf6N2E2_2212 0.32 -2.5 2,620,975 - Pf6N2E2_2212 0.32 -1.6 2,621,028 + Pf6N2E2_2212 0.38 -0.6 2,621,029 - Pf6N2E2_2212 0.38 -1.6 2,621,029 - Pf6N2E2_2212 0.38 -0.5 2,621,043 + Pf6N2E2_2212 0.39 +0.3 2,621,044 - Pf6N2E2_2212 0.39 +1.4 2,621,052 + Pf6N2E2_2212 0.40 -0.5 2,621,052 + Pf6N2E2_2212 0.40 +0.5 2,621,166 + Pf6N2E2_2212 0.51 +0.2 2,621,166 + Pf6N2E2_2212 0.51 +1.6 2,621,167 - Pf6N2E2_2212 0.51 -0.2 2,621,167 - Pf6N2E2_2212 0.51 +0.5 2,621,167 - Pf6N2E2_2212 0.51 +1.3 2,621,167 - Pf6N2E2_2212 0.51 +2.2 2,621,167 - Pf6N2E2_2212 0.51 -0.2 2,621,526 + Pf6N2E2_2212 0.86 +0.2 2,621,526 + Pf6N2E2_2212 0.86 +0.0 2,621,526 + Pf6N2E2_2212 0.86 +1.0 2,621,527 - Pf6N2E2_2212 0.86 +0.1 2,621,527 - Pf6N2E2_2212 0.86 -2.1 2,621,527 - Pf6N2E2_2212 0.86 +0.5 2,621,527 - Pf6N2E2_2212 0.86 +1.5 2,621,527 - Pf6N2E2_2212 0.86 +0.7 2,621,527 - Pf6N2E2_2212 0.86 +0.2 2,621,527 - Pf6N2E2_2212 0.86 -0.7 2,621,527 - Pf6N2E2_2212 0.86 -1.2 2,621,527 - Pf6N2E2_2212 0.86 +0.7 2,621,530 + Pf6N2E2_2212 0.87 +0.4 2,621,531 - Pf6N2E2_2212 0.87 -0.4 2,621,531 - Pf6N2E2_2212 0.87 +0.4 2,621,565 + +1.0 2,621,565 + +1.0 2,621,565 + +0.3 2,621,566 - -0.7 2,621,569 + +1.3 2,621,569 + -0.6
Or see this region's nucleotide sequence