Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2310 and Dsui_2311 are separated by 40 nucleotides Dsui_2311 and Dsui_2312 are separated by 207 nucleotides Dsui_2312 and Dsui_2313 are separated by 144 nucleotides
Dsui_2310: Dsui_2310 - tRNA 2-selenouridine synthase, at 2,465,925 to 2,467,013
_2310
Dsui_2311: Dsui_2311 - isochorismate hydrolase, at 2,467,054 to 2,467,596
_2311
Dsui_2312: Dsui_2312 - 3-hydroxybutyrate dehydrogenase, at 2,467,804 to 2,468,586
_2312
Dsui_2313: Dsui_2313 - CTP synthase, at 2,468,731 to 2,470,371
_2313
Position (kb)
2467
2468
2469 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2466.827 kb on - strand, within Dsui_2310 at 2466.852 kb on + strand, within Dsui_2310 at 2466.917 kb on + strand at 2466.946 kb on + strand at 2467.049 kb on + strand at 2467.059 kb on + strand at 2467.064 kb on + strand at 2467.128 kb on + strand, within Dsui_2311 at 2467.131 kb on - strand at 2467.169 kb on - strand, within Dsui_2311 at 2467.398 kb on - strand at 2467.553 kb on + strand at 2467.563 kb on + strand at 2467.571 kb on - strand at 2467.787 kb on + strand at 2468.130 kb on + strand, within Dsui_2312 at 2468.138 kb on + strand, within Dsui_2312 at 2468.287 kb on + strand, within Dsui_2312 at 2468.319 kb on - strand at 2468.336 kb on - strand at 2468.410 kb on + strand, within Dsui_2312 at 2468.410 kb on + strand at 2468.410 kb on + strand, within Dsui_2312 at 2468.410 kb on - strand at 2468.410 kb on - strand at 2468.425 kb on + strand, within Dsui_2312 at 2468.591 kb on + strand at 2468.596 kb on + strand at 2468.609 kb on - strand at 2468.720 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 2,466,827 - Dsui_2310 0.83 -1.8 2,466,852 + Dsui_2310 0.85 -0.5 2,466,917 + -0.5 2,466,946 + -1.1 2,467,049 + -0.5 2,467,059 + +0.5 2,467,064 + -0.1 2,467,128 + Dsui_2311 0.14 -0.2 2,467,131 - -1.1 2,467,169 - Dsui_2311 0.21 -2.1 2,467,398 - -0.5 2,467,553 + -0.1 2,467,563 + +2.8 2,467,571 - -0.5 2,467,787 + -0.5 2,468,130 + Dsui_2312 0.42 -1.1 2,468,138 + Dsui_2312 0.43 -2.1 2,468,287 + Dsui_2312 0.62 -0.1 2,468,319 - +0.5 2,468,336 - -0.5 2,468,410 + Dsui_2312 0.77 -2.1 2,468,410 + +0.5 2,468,410 + Dsui_2312 0.77 -1.1 2,468,410 - +0.5 2,468,410 - -1.1 2,468,425 + Dsui_2312 0.79 -1.1 2,468,591 + +0.5 2,468,596 + -1.1 2,468,609 - -2.1 2,468,720 + -3.7
Or see this region's nucleotide sequence