Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23210

Experiment: nitrate (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23205 and BWI76_RS23210 are separated by 148 nucleotidesBWI76_RS23210 and BWI76_RS23215 are separated by 17 nucleotides BWI76_RS23205: BWI76_RS23205 - propanediol utilization protein PduX, at 4,833,488 to 4,834,354 _RS23205 BWI76_RS23210: BWI76_RS23210 - threonine-phosphate decarboxylase, at 4,834,503 to 4,835,582 _RS23210 BWI76_RS23215: BWI76_RS23215 - N-acetylmuramoyl-L-alanine amidase, at 4,835,600 to 4,836,853 _RS23215 Position (kb) 4834 4835 4836Strain fitness (log2 ratio) -1 0 1at 4833.580 kb on + strand, within BWI76_RS23205at 4833.670 kb on + strand, within BWI76_RS23205at 4833.745 kb on + strand, within BWI76_RS23205at 4833.863 kb on - strand, within BWI76_RS23205at 4833.887 kb on + strand, within BWI76_RS23205at 4834.041 kb on - strand, within BWI76_RS23205at 4834.336 kb on - strandat 4834.338 kb on + strandat 4834.340 kb on + strandat 4834.346 kb on - strandat 4834.348 kb on + strandat 4834.348 kb on + strandat 4834.536 kb on - strandat 4834.599 kb on - strandat 4834.697 kb on + strand, within BWI76_RS23210at 4834.701 kb on + strand, within BWI76_RS23210at 4835.216 kb on + strand, within BWI76_RS23210at 4835.408 kb on + strand, within BWI76_RS23210at 4835.566 kb on + strandat 4835.602 kb on + strandat 4835.665 kb on - strandat 4835.717 kb on - strandat 4835.733 kb on + strand, within BWI76_RS23215at 4835.954 kb on + strand, within BWI76_RS23215at 4835.969 kb on - strand, within BWI76_RS23215at 4836.066 kb on + strand, within BWI76_RS23215at 4836.246 kb on + strand, within BWI76_RS23215at 4836.329 kb on + strand, within BWI76_RS23215at 4836.364 kb on - strand, within BWI76_RS23215at 4836.448 kb on + strand, within BWI76_RS23215at 4836.448 kb on + strand, within BWI76_RS23215at 4836.499 kb on + strand, within BWI76_RS23215

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Per-strain Table

Position Strand Gene LocusTag Fraction nitrate (N)
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4,833,580 + BWI76_RS23205 0.11 -0.4
4,833,670 + BWI76_RS23205 0.21 -0.0
4,833,745 + BWI76_RS23205 0.30 -1.5
4,833,863 - BWI76_RS23205 0.43 +0.5
4,833,887 + BWI76_RS23205 0.46 +0.1
4,834,041 - BWI76_RS23205 0.64 -0.1
4,834,336 - +0.0
4,834,338 + -1.0
4,834,340 + -0.1
4,834,346 - -0.8
4,834,348 + -0.3
4,834,348 + -0.4
4,834,536 - +0.2
4,834,599 - -0.3
4,834,697 + BWI76_RS23210 0.18 -0.8
4,834,701 + BWI76_RS23210 0.18 -0.1
4,835,216 + BWI76_RS23210 0.66 -0.7
4,835,408 + BWI76_RS23210 0.84 -0.4
4,835,566 + -0.4
4,835,602 + -0.2
4,835,665 - +0.5
4,835,717 - -0.4
4,835,733 + BWI76_RS23215 0.11 +0.2
4,835,954 + BWI76_RS23215 0.28 +0.2
4,835,969 - BWI76_RS23215 0.29 -0.6
4,836,066 + BWI76_RS23215 0.37 -0.7
4,836,246 + BWI76_RS23215 0.52 +0.4
4,836,329 + BWI76_RS23215 0.58 -1.7
4,836,364 - BWI76_RS23215 0.61 -0.3
4,836,448 + BWI76_RS23215 0.68 -0.5
4,836,448 + BWI76_RS23215 0.68 -0.7
4,836,499 + BWI76_RS23215 0.72 -0.1

Or see this region's nucleotide sequence