Experiment: nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23205 and BWI76_RS23210 are separated by 148 nucleotides BWI76_RS23210 and BWI76_RS23215 are separated by 17 nucleotides
BWI76_RS23205: BWI76_RS23205 - propanediol utilization protein PduX, at 4,833,488 to 4,834,354
_RS23205
BWI76_RS23210: BWI76_RS23210 - threonine-phosphate decarboxylase, at 4,834,503 to 4,835,582
_RS23210
BWI76_RS23215: BWI76_RS23215 - N-acetylmuramoyl-L-alanine amidase, at 4,835,600 to 4,836,853
_RS23215
Position (kb)
4834
4835
4836 Strain fitness (log2 ratio)
-1
0
1 at 4833.580 kb on + strand, within BWI76_RS23205 at 4833.670 kb on + strand, within BWI76_RS23205 at 4833.745 kb on + strand, within BWI76_RS23205 at 4833.863 kb on - strand, within BWI76_RS23205 at 4833.887 kb on + strand, within BWI76_RS23205 at 4834.041 kb on - strand, within BWI76_RS23205 at 4834.336 kb on - strand at 4834.338 kb on + strand at 4834.340 kb on + strand at 4834.346 kb on - strand at 4834.348 kb on + strand at 4834.348 kb on + strand at 4834.536 kb on - strand at 4834.599 kb on - strand at 4834.697 kb on + strand, within BWI76_RS23210 at 4834.701 kb on + strand, within BWI76_RS23210 at 4835.216 kb on + strand, within BWI76_RS23210 at 4835.408 kb on + strand, within BWI76_RS23210 at 4835.566 kb on + strand at 4835.602 kb on + strand at 4835.665 kb on - strand at 4835.717 kb on - strand at 4835.733 kb on + strand, within BWI76_RS23215 at 4835.954 kb on + strand, within BWI76_RS23215 at 4835.969 kb on - strand, within BWI76_RS23215 at 4836.066 kb on + strand, within BWI76_RS23215 at 4836.246 kb on + strand, within BWI76_RS23215 at 4836.329 kb on + strand, within BWI76_RS23215 at 4836.364 kb on - strand, within BWI76_RS23215 at 4836.448 kb on + strand, within BWI76_RS23215 at 4836.448 kb on + strand, within BWI76_RS23215 at 4836.499 kb on + strand, within BWI76_RS23215
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate (N) remove 4,833,580 + BWI76_RS23205 0.11 -0.4 4,833,670 + BWI76_RS23205 0.21 -0.0 4,833,745 + BWI76_RS23205 0.30 -1.5 4,833,863 - BWI76_RS23205 0.43 +0.5 4,833,887 + BWI76_RS23205 0.46 +0.1 4,834,041 - BWI76_RS23205 0.64 -0.1 4,834,336 - +0.0 4,834,338 + -1.0 4,834,340 + -0.1 4,834,346 - -0.8 4,834,348 + -0.3 4,834,348 + -0.4 4,834,536 - +0.2 4,834,599 - -0.3 4,834,697 + BWI76_RS23210 0.18 -0.8 4,834,701 + BWI76_RS23210 0.18 -0.1 4,835,216 + BWI76_RS23210 0.66 -0.7 4,835,408 + BWI76_RS23210 0.84 -0.4 4,835,566 + -0.4 4,835,602 + -0.2 4,835,665 - +0.5 4,835,717 - -0.4 4,835,733 + BWI76_RS23215 0.11 +0.2 4,835,954 + BWI76_RS23215 0.28 +0.2 4,835,969 - BWI76_RS23215 0.29 -0.6 4,836,066 + BWI76_RS23215 0.37 -0.7 4,836,246 + BWI76_RS23215 0.52 +0.4 4,836,329 + BWI76_RS23215 0.58 -1.7 4,836,364 - BWI76_RS23215 0.61 -0.3 4,836,448 + BWI76_RS23215 0.68 -0.5 4,836,448 + BWI76_RS23215 0.68 -0.7 4,836,499 + BWI76_RS23215 0.72 -0.1
Or see this region's nucleotide sequence