Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04454 and H281DRAFT_04455 are separated by 316 nucleotides H281DRAFT_04455 and H281DRAFT_04456 are separated by 106 nucleotides H281DRAFT_04456 and H281DRAFT_04457 overlap by 4 nucleotides
H281DRAFT_04454: H281DRAFT_04454 - amino acid/amide ABC transporter ATP-binding protein 2, HAAT family, at 174,794 to 175,507
_04454
H281DRAFT_04455: H281DRAFT_04455 - Protein of unknown function (DUF2993), at 175,824 to 178,043
_04455
H281DRAFT_04456: H281DRAFT_04456 - 5-deoxyglucuronate isomerase, at 178,150 to 178,950
_04456
H281DRAFT_04457: H281DRAFT_04457 - 2-keto-myo-inositol dehydratase, at 178,947 to 179,897
_04457
Position (kb) 175
176
177
178
179 Strain fitness (log2 ratio) -2
-1
0
1 at 175.524 kb on - strand at 175.524 kb on - strand at 175.524 kb on - strand at 175.742 kb on + strand at 175.966 kb on - strand at 176.325 kb on + strand, within H281DRAFT_04455 at 176.329 kb on + strand, within H281DRAFT_04455 at 176.865 kb on + strand, within H281DRAFT_04455 at 177.228 kb on + strand, within H281DRAFT_04455 at 177.228 kb on + strand, within H281DRAFT_04455 at 177.229 kb on - strand, within H281DRAFT_04455 at 177.229 kb on - strand, within H281DRAFT_04455 at 177.409 kb on - strand, within H281DRAFT_04455 at 177.596 kb on - strand, within H281DRAFT_04455 at 177.773 kb on - strand, within H281DRAFT_04455 at 177.954 kb on + strand at 178.239 kb on - strand, within H281DRAFT_04456 at 178.392 kb on - strand, within H281DRAFT_04456 at 178.394 kb on + strand, within H281DRAFT_04456 at 178.395 kb on - strand, within H281DRAFT_04456 at 178.455 kb on - strand, within H281DRAFT_04456 at 178.537 kb on + strand, within H281DRAFT_04456 at 178.538 kb on - strand, within H281DRAFT_04456 at 178.542 kb on - strand, within H281DRAFT_04456 at 178.900 kb on - strand at 178.942 kb on + strand at 178.943 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 175,524 - +0.4 175,524 - -0.3 175,524 - +0.2 175,742 + +0.0 175,966 - -0.3 176,325 + H281DRAFT_04455 0.23 -1.4 176,329 + H281DRAFT_04455 0.23 -0.2 176,865 + H281DRAFT_04455 0.47 -1.5 177,228 + H281DRAFT_04455 0.63 +0.1 177,228 + H281DRAFT_04455 0.63 +0.2 177,229 - H281DRAFT_04455 0.63 -1.4 177,229 - H281DRAFT_04455 0.63 -0.3 177,409 - H281DRAFT_04455 0.71 -0.3 177,596 - H281DRAFT_04455 0.80 -0.0 177,773 - H281DRAFT_04455 0.88 -0.4 177,954 + -0.5 178,239 - H281DRAFT_04456 0.11 +0.3 178,392 - H281DRAFT_04456 0.30 -2.0 178,394 + H281DRAFT_04456 0.30 +0.1 178,395 - H281DRAFT_04456 0.31 -1.7 178,455 - H281DRAFT_04456 0.38 -0.3 178,537 + H281DRAFT_04456 0.48 -0.3 178,538 - H281DRAFT_04456 0.48 +0.4 178,542 - H281DRAFT_04456 0.49 +0.5 178,900 - -0.1 178,942 + -0.8 178,943 - -1.8
Or see this region's nucleotide sequence