Experiment: Thymidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19300 and BWI76_RS19305 are separated by 10 nucleotides BWI76_RS19305 and BWI76_RS19310 overlap by 29 nucleotides BWI76_RS19310 and BWI76_RS19315 overlap by 4 nucleotides
BWI76_RS19300: BWI76_RS19300 - ABC transporter ATP-binding protein, at 4,020,682 to 4,021,455
_RS19300
BWI76_RS19305: BWI76_RS19305 - ABC transporter ATP-binding protein, at 4,021,466 to 4,022,329
_RS19305
BWI76_RS19310: BWI76_RS19310 - ABC transporter permease, at 4,022,301 to 4,023,206
_RS19310
BWI76_RS19315: BWI76_RS19315 - ABC transporter permease, at 4,023,203 to 4,024,240
_RS19315
Position (kb)
4021
4022
4023 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4020.590 kb on - strand at 4020.658 kb on + strand at 4020.658 kb on + strand at 4020.662 kb on - strand at 4020.662 kb on - strand at 4020.675 kb on + strand at 4020.688 kb on - strand at 4020.700 kb on - strand at 4020.700 kb on - strand at 4020.731 kb on + strand at 4020.731 kb on + strand at 4020.739 kb on - strand at 4020.748 kb on + strand at 4020.762 kb on + strand, within BWI76_RS19300 at 4020.770 kb on + strand, within BWI76_RS19300 at 4020.770 kb on + strand, within BWI76_RS19300 at 4020.770 kb on + strand, within BWI76_RS19300 at 4020.778 kb on - strand, within BWI76_RS19300 at 4020.873 kb on + strand, within BWI76_RS19300 at 4021.002 kb on - strand, within BWI76_RS19300 at 4021.052 kb on - strand, within BWI76_RS19300 at 4021.166 kb on - strand, within BWI76_RS19300 at 4021.275 kb on + strand, within BWI76_RS19300 at 4021.917 kb on + strand, within BWI76_RS19305 at 4021.948 kb on + strand, within BWI76_RS19305 at 4022.054 kb on + strand, within BWI76_RS19305 at 4022.157 kb on + strand, within BWI76_RS19305 at 4022.241 kb on - strand, within BWI76_RS19305 at 4022.298 kb on + strand at 4022.546 kb on - strand, within BWI76_RS19310 at 4022.644 kb on - strand, within BWI76_RS19310
Per-strain Table
Position Strand Gene LocusTag Fraction Thymidine (N) remove 4,020,590 - -1.9 4,020,658 + +0.7 4,020,658 + -2.3 4,020,662 - -1.1 4,020,662 - -1.2 4,020,675 + -2.6 4,020,688 - -1.1 4,020,700 - +0.3 4,020,700 - +1.7 4,020,731 + -0.5 4,020,731 + -0.1 4,020,739 - -1.3 4,020,748 + +0.6 4,020,762 + BWI76_RS19300 0.10 +0.1 4,020,770 + BWI76_RS19300 0.11 -0.5 4,020,770 + BWI76_RS19300 0.11 -1.3 4,020,770 + BWI76_RS19300 0.11 -0.1 4,020,778 - BWI76_RS19300 0.12 -0.0 4,020,873 + BWI76_RS19300 0.25 +0.6 4,021,002 - BWI76_RS19300 0.41 +1.4 4,021,052 - BWI76_RS19300 0.48 -0.2 4,021,166 - BWI76_RS19300 0.63 -0.1 4,021,275 + BWI76_RS19300 0.77 -0.3 4,021,917 + BWI76_RS19305 0.52 +1.1 4,021,948 + BWI76_RS19305 0.56 +0.5 4,022,054 + BWI76_RS19305 0.68 +1.4 4,022,157 + BWI76_RS19305 0.80 +0.1 4,022,241 - BWI76_RS19305 0.90 +0.1 4,022,298 + +2.0 4,022,546 - BWI76_RS19310 0.27 +1.0 4,022,644 - BWI76_RS19310 0.38 +0.3
Or see this region's nucleotide sequence