Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c10090 and PGA1_c10100 are separated by 284 nucleotides PGA1_c10100 and PGA1_c10110 overlap by 8 nucleotides
PGA1_c10090: PGA1_c10090 - YeeE/YedE family (DUF395)., at 1,041,517 to 1,042,590
_c10090
PGA1_c10100: PGA1_c10100 - putative glutathione transport system permease protein GsiD, at 1,042,875 to 1,043,846
_c10100
PGA1_c10110: PGA1_c10110 - glutathione transport system permease protein GsiC, at 1,043,839 to 1,044,846
_c10110
Position (kb)
1042
1043
1044 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1041.880 kb on - strand, within PGA1_c10090 at 1041.880 kb on - strand, within PGA1_c10090 at 1042.119 kb on - strand, within PGA1_c10090 at 1042.172 kb on + strand, within PGA1_c10090 at 1042.172 kb on + strand, within PGA1_c10090 at 1042.243 kb on + strand, within PGA1_c10090 at 1042.388 kb on - strand, within PGA1_c10090 at 1042.436 kb on + strand, within PGA1_c10090 at 1042.436 kb on + strand, within PGA1_c10090 at 1042.801 kb on - strand at 1042.840 kb on - strand at 1043.283 kb on + strand, within PGA1_c10100 at 1043.309 kb on + strand, within PGA1_c10100 at 1043.427 kb on - strand, within PGA1_c10100 at 1043.483 kb on + strand, within PGA1_c10100 at 1043.581 kb on - strand, within PGA1_c10100 at 1043.737 kb on - strand, within PGA1_c10100 at 1043.779 kb on + strand at 1043.797 kb on - strand at 1043.832 kb on + strand at 1043.971 kb on + strand, within PGA1_c10110 at 1044.009 kb on + strand, within PGA1_c10110 at 1044.046 kb on + strand, within PGA1_c10110 at 1044.171 kb on + strand, within PGA1_c10110 at 1044.199 kb on - strand, within PGA1_c10110 at 1044.201 kb on - strand, within PGA1_c10110 at 1044.267 kb on + strand, within PGA1_c10110 at 1044.275 kb on - strand, within PGA1_c10110 at 1044.314 kb on + strand, within PGA1_c10110 at 1044.353 kb on - strand, within PGA1_c10110 at 1044.390 kb on + strand, within PGA1_c10110 at 1044.406 kb on - strand, within PGA1_c10110 at 1044.416 kb on - strand, within PGA1_c10110 at 1044.485 kb on - strand, within PGA1_c10110 at 1044.733 kb on + strand, within PGA1_c10110 at 1044.741 kb on - strand, within PGA1_c10110 at 1044.802 kb on + strand at 1044.811 kb on + strand at 1044.816 kb on + strand at 1044.824 kb on - strand at 1044.846 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.004 mg/ml remove 1,041,880 - PGA1_c10090 0.34 +0.9 1,041,880 - PGA1_c10090 0.34 +0.1 1,042,119 - PGA1_c10090 0.56 +0.4 1,042,172 + PGA1_c10090 0.61 -1.2 1,042,172 + PGA1_c10090 0.61 -1.3 1,042,243 + PGA1_c10090 0.68 +0.2 1,042,388 - PGA1_c10090 0.81 -0.0 1,042,436 + PGA1_c10090 0.86 -0.4 1,042,436 + PGA1_c10090 0.86 -0.2 1,042,801 - -0.4 1,042,840 - -1.4 1,043,283 + PGA1_c10100 0.42 -0.8 1,043,309 + PGA1_c10100 0.45 -0.4 1,043,427 - PGA1_c10100 0.57 +0.1 1,043,483 + PGA1_c10100 0.63 -1.3 1,043,581 - PGA1_c10100 0.73 -1.6 1,043,737 - PGA1_c10100 0.89 -1.2 1,043,779 + -0.0 1,043,797 - -1.1 1,043,832 + +0.8 1,043,971 + PGA1_c10110 0.13 +0.2 1,044,009 + PGA1_c10110 0.17 -1.4 1,044,046 + PGA1_c10110 0.21 -0.2 1,044,171 + PGA1_c10110 0.33 -0.0 1,044,199 - PGA1_c10110 0.36 -0.2 1,044,201 - PGA1_c10110 0.36 -2.4 1,044,267 + PGA1_c10110 0.42 -0.0 1,044,275 - PGA1_c10110 0.43 -0.8 1,044,314 + PGA1_c10110 0.47 +0.3 1,044,353 - PGA1_c10110 0.51 -0.5 1,044,390 + PGA1_c10110 0.55 +0.8 1,044,406 - PGA1_c10110 0.56 +1.0 1,044,416 - PGA1_c10110 0.57 -1.0 1,044,485 - PGA1_c10110 0.64 -0.4 1,044,733 + PGA1_c10110 0.89 -0.7 1,044,741 - PGA1_c10110 0.89 -0.7 1,044,802 + -0.2 1,044,811 + -2.9 1,044,816 + -0.1 1,044,824 - -1.2 1,044,846 - +0.2
Or see this region's nucleotide sequence