Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2503
Experiment: sodium iodide 0.125 M
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | sodium iodide 0.125 M |
|---|---|---|---|---|---|
| remove | |||||
| 2,952,013 | + | Pf6N2E2_2502 | 0.72 | +0.9 | |
| 2,952,218 | + | Pf6N2E2_2502 | 0.83 | +1.4 | |
| 2,952,330 | + | Pf6N2E2_2502 | 0.89 | -0.0 | |
| 2,952,332 | + | Pf6N2E2_2502 | 0.89 | -1.9 | |
| 2,952,400 | + | +0.7 | |||
| 2,952,492 | + | -1.1 | |||
| 2,952,492 | + | +0.1 | |||
| 2,952,557 | + | -0.2 | |||
| 2,952,577 | + | +0.6 | |||
| 2,952,577 | + | -0.0 | |||
| 2,952,577 | + | -0.4 | |||
| 2,952,722 | + | -0.3 | |||
| 2,952,750 | + | -0.1 | |||
| 2,952,751 | - | +0.2 | |||
| 2,952,813 | + | -0.7 | |||
| 2,952,814 | - | -0.5 | |||
| 2,952,814 | - | -0.4 | |||
| 2,952,814 | - | +0.9 | |||
| 2,953,979 | - | Pf6N2E2_2503 | 0.89 | -2.0 | |
| 2,953,984 | - | Pf6N2E2_2503 | 0.90 | +0.0 | |
| 2,954,018 | - | -0.8 | |||
| 2,954,209 | - | -1.0 | |||
| 2,954,683 | - | Pf6N2E2_2504 | 0.10 | -1.4 |
Or see this region's nucleotide sequence