Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01470

Experiment: PYE 0.5x 30C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C
1,576,352	+				+0.2
1,576,372	+				-0.6
1,576,395	-				-0.1
1,576,429	+				-0.1
1,576,456	+		CCNA_01468	0.12	+0.6
1,576,474	+		CCNA_01468	0.14	+0.4
1,576,474	+		CCNA_01468	0.14	+0.3
1,576,482	-		CCNA_01468	0.15	-0.4
1,576,482	-		CCNA_01468	0.15	-1.1
1,576,482	-		CCNA_01468	0.15	-0.1
1,576,482	-		CCNA_01468	0.15	+1.4
1,576,501	+		CCNA_01468	0.18	-1.6
1,576,501	+		CCNA_01468	0.18	-0.4
1,576,509	-		CCNA_01468	0.19	+0.9
1,576,509	-		CCNA_01468	0.19	-0.9
1,576,516	+		CCNA_01468	0.20	-1.2
1,576,518	+		CCNA_01468	0.20	-0.4
1,576,527	+		CCNA_01468	0.22	-0.1
1,576,534	-		CCNA_01468	0.22	-1.1
1,576,534	-		CCNA_01468	0.22	-0.6
1,576,534	-		CCNA_01468	0.22	-2.2
1,576,643	+		CCNA_01468	0.37	-1.0
1,576,652	+		CCNA_01468	0.38	+0.2
1,576,692	+		CCNA_01468	0.44	-0.7
1,576,692	+		CCNA_01468	0.44	+0.1
1,576,700	-		CCNA_01468	0.45	+0.4
1,576,700	-		CCNA_01468	0.45	+2.3
1,576,700	-		CCNA_01468	0.45	+1.9
1,576,700	-		CCNA_01468	0.45	-0.4
1,576,705	-		CCNA_01468	0.45	-0.9
1,576,753	-		CCNA_01468	0.52	+0.2
1,576,783	+		CCNA_01468	0.56	-1.2
1,576,819	+		CCNA_01468	0.61	-0.3
1,576,850	+		CCNA_01468	0.65	+0.4
1,576,873	+		CCNA_01468	0.68	-0.6
1,576,881	-		CCNA_01468	0.69	+1.6
1,576,896	-		CCNA_01468	0.71	-0.2
1,576,930	+		CCNA_01468	0.76	+1.1
1,576,944	+		CCNA_01468	0.78	-0.8
1,576,952	-		CCNA_01468	0.79	-2.0
1,576,986	-		CCNA_01468	0.83	+0.4
1,577,004	+		CCNA_01468	0.86	-1.5
1,577,038	-				-0.1
1,577,060	+				+0.4
1,577,068	-				-0.3
1,577,077	+				-1.4
1,577,085	-				-0.4
1,577,129	+		CCNA_01469	0.13	-1.4
1,577,141	+		CCNA_01469	0.20	+0.5
1,577,150	+		CCNA_01469	0.26	-0.9
1,577,160	+		CCNA_01469	0.32	-0.1
1,577,175	+		CCNA_01469	0.40	+0.5
1,577,203	+		CCNA_01469	0.57	+2.4
1,577,227	-		CCNA_01469	0.71	+1.4
1,577,239	+		CCNA_01469	0.79	-0.9
1,577,248	+		CCNA_01469	0.84	-2.1
1,577,263	+				-0.8
1,577,263	+				-1.1
1,577,263	+				-1.3
1,577,278	-				+0.7
1,577,282	+				+1.6
1,577,297	+				+0.9
1,577,373	+		CCNA_01470	0.11	-1.5
1,577,399	-		CCNA_01470	0.14	-2.0
1,577,406	+		CCNA_01470	0.15	-0.1
1,577,410	+		CCNA_01470	0.16	-1.2
1,577,414	-		CCNA_01470	0.16	-0.9
1,577,439	+		CCNA_01470	0.19	+0.2
1,577,461	-		CCNA_01470	0.22	-1.6
1,577,483	+		CCNA_01470	0.24	-1.6
1,577,496	-		CCNA_01470	0.26	+0.2
1,577,500	+		CCNA_01470	0.26	-1.5
1,577,519	+		CCNA_01470	0.28	-1.1
1,577,521	+		CCNA_01470	0.28	-1.1
1,577,531	+		CCNA_01470	0.30	-0.2
1,577,531	+				+1.7
1,577,536	+		CCNA_01470	0.30	-1.0
1,577,557	+		CCNA_01470	0.33	+0.4
1,577,574	-		CCNA_01470	0.35	-0.9
1,577,585	-		CCNA_01470	0.36	-0.0
1,577,624	-		CCNA_01470	0.40	-0.1
1,577,638	-		CCNA_01470	0.42	-0.4
1,577,665	+		CCNA_01470	0.45	-0.8
1,577,666	+		CCNA_01470	0.45	-1.8
1,577,666	+		CCNA_01470	0.45	-1.1
1,577,666	+		CCNA_01470	0.45	-0.3
1,577,666	+		CCNA_01470	0.45	+0.4
1,577,672	+		CCNA_01470	0.46	-1.4
1,577,674	-		CCNA_01470	0.46	-1.1
1,577,680	-		CCNA_01470	0.47	+0.9
1,577,725	-		CCNA_01470	0.52	+0.9
1,577,745	-		CCNA_01470	0.54	+0.1
1,577,787	+		CCNA_01470	0.59	-1.1
1,577,813	+		CCNA_01470	0.62	-0.1
1,577,821	-		CCNA_01470	0.63	-0.9
1,577,821	-		CCNA_01470	0.63	+0.4
1,577,904	+		CCNA_01470	0.73	+1.9
1,577,948	-		CCNA_01470	0.78	+2.9
1,577,981	+		CCNA_01470	0.82	-1.0
1,578,007	-		CCNA_01470	0.85	+0.6
1,578,032	+		CCNA_01470	0.87	+0.8
1,578,040	-		CCNA_01470	0.88	+0.1
1,578,040	-		CCNA_01470	0.88	-1.2
1,578,085	-				+1.4
1,578,090	-				+0.9
1,578,108	+				-1.1
1,578,122	-				-1.2
1,578,142	+				+0.1
1,578,143	-				+0.4
1,578,150	-				-0.6
1,578,163	-				+0.4
1,578,211	+				+0.3
1,578,211	+				-2.1
1,578,211	+				-0.1
1,578,211	+				+0.2
1,578,219	-				+0.2
1,578,219	-				-1.4
1,578,219	-				-0.1
1,578,219	-				-0.8
1,578,225	-				-2.6
1,578,236	-				+0.1
1,578,237	-				-0.6
1,578,252	-				-1.0
1,578,267	+				-0.9
1,578,267	+				-2.5
1,578,270	-				-1.0
1,578,275	-				+0.9
1,578,275	-				-0.3
1,578,331	-		CCNA_01471	0.12	-1.6
1,578,341	+		CCNA_01471	0.13	-0.1
1,578,395	-		CCNA_01471	0.17	-0.1
1,578,463	+		CCNA_01471	0.21	+0.4
1,578,463	+		CCNA_01471	0.21	+0.1
1,578,507	-		CCNA_01471	0.24	-0.9
1,578,525	-		CCNA_01471	0.25	-1.6
1,578,536	+		CCNA_01471	0.26	-0.6
1,578,544	-		CCNA_01471	0.27	+1.9
1,578,556	+		CCNA_01471	0.27	+0.4
1,578,565	-		CCNA_01471	0.28	-0.2
1,578,571	+		CCNA_01471	0.29	-0.1
1,578,574	-		CCNA_01471	0.29	-0.9
1,578,576	-		CCNA_01471	0.29	+1.9
1,578,576	-		CCNA_01471	0.29	-1.2
1,578,628	-		CCNA_01471	0.32	-1.4
1,578,635	+		CCNA_01471	0.33	-0.5
1,578,643	-		CCNA_01471	0.33	+0.9
1,578,643	-		CCNA_01471	0.33	+1.9
1,578,643	-		CCNA_01471	0.33	-0.4
1,578,674	+		CCNA_01471	0.35	+0.1
1,578,748	+		CCNA_01471	0.40	-0.4
1,578,748	+		CCNA_01471	0.40	+0.4
1,578,751	-		CCNA_01471	0.41	-1.6
1,578,767	+		CCNA_01471	0.42	-1.3
1,578,805	+		CCNA_01471	0.44	+0.5
1,578,813	-		CCNA_01471	0.45	+0.9
1,578,818	+		CCNA_01471	0.45	-0.7
1,578,819	+		CCNA_01471	0.45	+0.2
1,578,850	+		CCNA_01471	0.47	-1.3
1,578,850	+		CCNA_01471	0.47	-0.1
1,578,850	+		CCNA_01471	0.47	+1.4
1,578,850	+		CCNA_01471	0.47	-0.1
1,578,858	-		CCNA_01471	0.48	-0.4
1,578,858	-		CCNA_01471	0.48	-0.4
1,578,858	-		CCNA_01471	0.48	-0.1
1,578,862	+		CCNA_01471	0.48	+1.4
1,578,865	-		CCNA_01471	0.48	-0.4
1,578,883	-		CCNA_01471	0.49	+1.7
1,578,898	+		CCNA_01471	0.50	-1.5
1,578,964	-		CCNA_01471	0.55	+0.4
1,578,965	+		CCNA_01471	0.55	-0.2
1,578,973	-		CCNA_01471	0.55	-1.8
1,579,018	+		CCNA_01471	0.58	+1.5
1,579,023	+		CCNA_01471	0.59	-0.1
1,579,031	-		CCNA_01471	0.59	-0.4
1,579,031	-		CCNA_01471	0.59	-0.6
1,579,055	+		CCNA_01471	0.61	-0.8
1,579,093	-		CCNA_01471	0.64	+0.1
1,579,139	+		CCNA_01471	0.67	-1.2