Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22880 and BWI76_RS22885 are separated by 149 nucleotides BWI76_RS22885 and BWI76_RS22890 are separated by 163 nucleotides
BWI76_RS22880: BWI76_RS22880 - L-serine ammonia-lyase, at 4,774,121 to 4,775,488
_RS22880
BWI76_RS22885: BWI76_RS22885 - aliphatic sulfonate ABC transporter substrate-binding protein, at 4,775,638 to 4,776,579
_RS22885
BWI76_RS22890: BWI76_RS22890 - 5,10-methylenetetrahydromethanopterin reductase, at 4,776,743 to 4,778,149
_RS22890
Position (kb)
4775
4776
4777 Strain fitness (log2 ratio)
-1
0
1 at 4775.082 kb on + strand, within BWI76_RS22880 at 4775.252 kb on + strand, within BWI76_RS22880 at 4775.255 kb on - strand, within BWI76_RS22880 at 4775.356 kb on - strand at 4775.824 kb on - strand, within BWI76_RS22885 at 4775.934 kb on - strand, within BWI76_RS22885 at 4775.944 kb on - strand, within BWI76_RS22885 at 4776.081 kb on + strand, within BWI76_RS22885 at 4776.086 kb on + strand, within BWI76_RS22885 at 4776.117 kb on + strand, within BWI76_RS22885 at 4776.171 kb on + strand, within BWI76_RS22885 at 4776.249 kb on - strand, within BWI76_RS22885 at 4776.256 kb on - strand, within BWI76_RS22885 at 4776.266 kb on + strand, within BWI76_RS22885 at 4776.266 kb on - strand, within BWI76_RS22885 at 4776.266 kb on - strand, within BWI76_RS22885 at 4776.267 kb on - strand, within BWI76_RS22885 at 4776.459 kb on + strand, within BWI76_RS22885 at 4776.551 kb on + strand at 4776.573 kb on + strand at 4776.987 kb on + strand, within BWI76_RS22890 at 4776.987 kb on + strand, within BWI76_RS22890 at 4777.188 kb on - strand, within BWI76_RS22890 at 4777.243 kb on - strand, within BWI76_RS22890 at 4777.487 kb on - strand, within BWI76_RS22890 at 4777.569 kb on + strand, within BWI76_RS22890
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 4,775,082 + BWI76_RS22880 0.70 +0.2 4,775,252 + BWI76_RS22880 0.83 -1.5 4,775,255 - BWI76_RS22880 0.83 +0.0 4,775,356 - +0.2 4,775,824 - BWI76_RS22885 0.20 +0.6 4,775,934 - BWI76_RS22885 0.31 +0.7 4,775,944 - BWI76_RS22885 0.32 +0.5 4,776,081 + BWI76_RS22885 0.47 +0.8 4,776,086 + BWI76_RS22885 0.48 -0.5 4,776,117 + BWI76_RS22885 0.51 -0.3 4,776,171 + BWI76_RS22885 0.57 +1.1 4,776,249 - BWI76_RS22885 0.65 -0.3 4,776,256 - BWI76_RS22885 0.66 -0.5 4,776,266 + BWI76_RS22885 0.67 -0.3 4,776,266 - BWI76_RS22885 0.67 -0.1 4,776,266 - BWI76_RS22885 0.67 -0.3 4,776,267 - BWI76_RS22885 0.67 +0.5 4,776,459 + BWI76_RS22885 0.87 +0.2 4,776,551 + -0.3 4,776,573 + -0.1 4,776,987 + BWI76_RS22890 0.17 +0.0 4,776,987 + BWI76_RS22890 0.17 +0.2 4,777,188 - BWI76_RS22890 0.32 -0.1 4,777,243 - BWI76_RS22890 0.36 +0.8 4,777,487 - BWI76_RS22890 0.53 -0.5 4,777,569 + BWI76_RS22890 0.59 -1.1
Or see this region's nucleotide sequence