Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3413

Experiment: m.b. Cephalothin 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.0001 mg/ml
3,590,818	-		Dshi_3411	0.81	-0.6
3,590,818	-		Dshi_3411	0.81	-0.9
3,590,842	+		Dshi_3411	0.83	-0.2
3,590,843	+		Dshi_3411	0.83	-0.3
3,590,856	-		Dshi_3411	0.83	+1.1
3,590,856	-		Dshi_3411	0.83	-0.1
3,590,856	-		Dshi_3411	0.83	+0.3
3,590,864	-		Dshi_3411	0.84	-0.1
3,590,896	+		Dshi_3411	0.85	+0.8
3,590,927	-		Dshi_3411	0.87	+2.4
3,590,968	-		Dshi_3411	0.89	+0.1
3,590,995	-				+0.5
3,591,058	-				+1.2
3,591,060	+				+1.1
3,591,100	-				+0.7
3,591,107	+				-1.1
3,591,107	+				+0.4
3,591,127	+				+0.4
3,591,241	+				-0.9
3,591,284	-				-0.6
3,591,322	+				-0.3
3,591,395	+				+0.2
3,591,395	+				+0.5
3,591,395	+				-1.3
3,591,402	+				+0.6
3,591,403	-				+0.2
3,591,403	-				+1.4
3,591,458	+		Dshi_3412	0.15	+1.0
3,591,466	-		Dshi_3412	0.16	-0.6
3,591,486	-		Dshi_3412	0.21	-0.4
3,591,504	+		Dshi_3412	0.25	-0.5
3,591,507	-		Dshi_3412	0.26	-0.5
3,591,546	-		Dshi_3412	0.35	+0.2
3,591,575	+		Dshi_3412	0.42	+1.0
3,591,609	+		Dshi_3412	0.50	+0.5
3,591,619	+		Dshi_3412	0.53	+0.0
3,591,627	-		Dshi_3412	0.55	+0.9
3,591,627	-		Dshi_3412	0.55	+0.2
3,591,656	-		Dshi_3412	0.62	-0.1
3,591,662	-		Dshi_3412	0.63	-0.4
3,591,684	+		Dshi_3412	0.68	+0.3
3,591,684	+		Dshi_3412	0.68	+1.0
3,591,730	+		Dshi_3412	0.79	+0.5
3,591,736	+		Dshi_3412	0.81	-1.2
3,591,760	-		Dshi_3412	0.86	+0.7
3,591,771	+		Dshi_3412	0.89	-0.4
3,591,775	+				+0.5
3,591,789	-				-1.3
3,591,794	+				+0.5
3,591,797	-				+0.4
3,591,853	+		Dshi_3413	0.14	-0.9
3,591,861	-		Dshi_3413	0.16	-0.5
3,591,861	-		Dshi_3413	0.16	+0.0
3,591,871	-		Dshi_3413	0.20	-2.4
3,591,900	-		Dshi_3413	0.31	-0.5
3,592,016	+		Dshi_3413	0.73	-0.6
3,592,051	-		Dshi_3413	0.86	+0.2
3,592,051	-		Dshi_3413	0.86	-0.3
3,592,114	-				+0.4
3,592,119	-				-0.4
3,592,134	+				-0.0
3,592,134	+				-0.2
3,592,134	+				+0.8
3,592,134	+				-0.1
3,592,136	+				+0.2
3,592,142	-				+0.3
3,592,142	-				-0.2
3,592,142	-				-2.3
3,592,142	-				-0.7
3,592,144	-				+0.1
3,592,223	+		Dshi_3414	0.14	+0.2
3,592,231	-		Dshi_3414	0.15	-0.1
3,592,234	+		Dshi_3414	0.15	-0.9
3,592,240	+		Dshi_3414	0.16	-0.2
3,592,278	+		Dshi_3414	0.20	+0.2
3,592,314	+		Dshi_3414	0.23	+0.4
3,592,322	-		Dshi_3414	0.24	-1.0
3,592,322	-		Dshi_3414	0.24	+0.4
3,592,359	+		Dshi_3414	0.28	-0.6
3,592,367	+		Dshi_3414	0.29	+0.2
3,592,379	+		Dshi_3414	0.30	+0.5
3,592,395	-		Dshi_3414	0.32	-0.4
3,592,400	-		Dshi_3414	0.32	+0.1
3,592,420	-		Dshi_3414	0.34	+0.4
3,592,424	-		Dshi_3414	0.35	-0.6
3,592,434	-		Dshi_3414	0.36	-0.4
3,592,463	-		Dshi_3414	0.39	+1.6
3,592,503	-		Dshi_3414	0.43	+1.0
3,592,510	+		Dshi_3414	0.44	+0.2
3,592,510	+		Dshi_3414	0.44	+0.4
3,592,525	+		Dshi_3414	0.45	+0.0
3,592,533	-		Dshi_3414	0.46	-1.5
3,592,533	-		Dshi_3414	0.46	-0.1
3,592,533	-		Dshi_3414	0.46	-0.4
3,592,574	+		Dshi_3414	0.50	-0.3
3,592,612	-		Dshi_3414	0.54	+0.8
3,592,623	-		Dshi_3414	0.55	-1.1
3,592,666	+		Dshi_3414	0.60	+0.2
3,592,727	+		Dshi_3414	0.66	-1.2
3,592,735	-		Dshi_3414	0.67	-0.1
3,592,735	-		Dshi_3414	0.67	+1.4
3,592,737	+		Dshi_3414	0.67	+0.8
3,592,737	+		Dshi_3414	0.67	+0.8
3,592,746	-		Dshi_3414	0.68	+0.2
3,592,765	+		Dshi_3414	0.70	-0.8
3,592,765	+		Dshi_3414	0.70	-0.3
3,592,768	-		Dshi_3414	0.70	-0.4
3,592,914	+		Dshi_3414	0.86	+0.4
3,592,914	+		Dshi_3414	0.86	-0.1
3,592,917	+		Dshi_3414	0.86	-0.5
3,592,925	-		Dshi_3414	0.87	-0.2
3,592,934	+		Dshi_3414	0.88	-0.4
3,592,934	+		Dshi_3414	0.88	+0.6
3,592,942	-		Dshi_3414	0.88	+0.0
3,592,957	+				-1.1
3,592,964	+				+1.4
3,592,990	-				+0.6
3,593,000	-				+1.4
3,593,007	-				-0.2
3,593,024	+				+0.4
3,593,046	+				+0.2
3,593,077	-				+0.2