Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2405
Experiment: m.b. Cephalothin 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. Cephalothin 0.0001 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,541,779 | + | +0.3 | |||
| 2,542,147 | - | Dshi_2405 | 0.26 | +0.1 | |
| 2,542,247 | + | Dshi_2405 | 0.32 | -0.8 | |
| 2,542,294 | - | Dshi_2405 | 0.35 | -0.6 | |
| 2,542,307 | + | Dshi_2405 | 0.35 | -1.1 | |
| 2,542,400 | - | Dshi_2405 | 0.41 | -2.1 | |
| 2,542,958 | - | Dshi_2405 | 0.73 | -0.7 | |
| 2,542,997 | - | Dshi_2405 | 0.75 | +0.2 | |
| 2,543,131 | + | Dshi_2405 | 0.83 | +0.5 | |
| 2,543,139 | - | Dshi_2405 | 0.84 | -1.5 | |
| 2,543,230 | - | Dshi_2405 | 0.89 | -1.0 | |
| 2,543,426 | - | +0.3 |
Or see this region's nucleotide sequence