Experiment: m.b. Cephalothin 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0735 and Dshi_0736 overlap by 4 nucleotides Dshi_0736 and Dshi_0737 are separated by 63 nucleotides Dshi_0737 and Dshi_0738 are separated by 60 nucleotides Dshi_0738 and Dshi_0739 are separated by 16 nucleotides
Dshi_0735: Dshi_0735 - hypothetical protein (RefSeq), at 742,674 to 743,288
_0735
Dshi_0736: Dshi_0736 - GCN5-related N-acetyltransferase (RefSeq), at 743,285 to 743,770
_0736
Dshi_0737: Dshi_0737 - heat shock protein DnaJ domain protein (RefSeq), at 743,834 to 744,517
_0737
Dshi_0738: Dshi_0738 - hypothetical protein (RefSeq), at 744,578 to 744,895
_0738
Dshi_0739: Dshi_0739 - Ppx/GppA phosphatase (RefSeq), at 744,912 to 746,432
_0739
Position (kb) 743
744
745 Strain fitness (log2 ratio) -1
0
1 at 742.834 kb on + strand, within Dshi_0735 at 742.864 kb on - strand, within Dshi_0735 at 742.942 kb on + strand, within Dshi_0735 at 742.950 kb on - strand, within Dshi_0735 at 743.101 kb on - strand, within Dshi_0735 at 743.165 kb on - strand, within Dshi_0735 at 743.171 kb on + strand, within Dshi_0735 at 743.347 kb on - strand, within Dshi_0736 at 743.397 kb on + strand, within Dshi_0736 at 743.599 kb on - strand, within Dshi_0736 at 743.631 kb on + strand, within Dshi_0736 at 743.639 kb on - strand, within Dshi_0736 at 743.674 kb on - strand, within Dshi_0736 at 743.678 kb on + strand, within Dshi_0736 at 743.686 kb on - strand, within Dshi_0736 at 743.769 kb on + strand at 743.824 kb on + strand at 743.941 kb on - strand, within Dshi_0737 at 744.079 kb on - strand, within Dshi_0737 at 744.110 kb on + strand, within Dshi_0737 at 744.295 kb on + strand, within Dshi_0737 at 744.296 kb on + strand, within Dshi_0737 at 744.457 kb on + strand at 744.521 kb on - strand at 744.557 kb on - strand at 744.605 kb on - strand at 744.858 kb on - strand, within Dshi_0738 at 745.115 kb on - strand, within Dshi_0739 at 745.288 kb on - strand, within Dshi_0739 at 745.503 kb on + strand, within Dshi_0739
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.0001 mg/ml remove 742,834 + Dshi_0735 0.26 -1.4 742,864 - Dshi_0735 0.31 -0.2 742,942 + Dshi_0735 0.44 +0.6 742,950 - Dshi_0735 0.45 +0.2 743,101 - Dshi_0735 0.69 -0.3 743,165 - Dshi_0735 0.80 +0.5 743,171 + Dshi_0735 0.81 -0.4 743,347 - Dshi_0736 0.13 +0.1 743,397 + Dshi_0736 0.23 -0.3 743,599 - Dshi_0736 0.65 -1.6 743,631 + Dshi_0736 0.71 -0.0 743,639 - Dshi_0736 0.73 +0.2 743,674 - Dshi_0736 0.80 -0.1 743,678 + Dshi_0736 0.81 -0.2 743,686 - Dshi_0736 0.83 -0.3 743,769 + -0.7 743,824 + -0.3 743,941 - Dshi_0737 0.16 +0.8 744,079 - Dshi_0737 0.36 -0.8 744,110 + Dshi_0737 0.40 -0.6 744,295 + Dshi_0737 0.67 -0.9 744,296 + Dshi_0737 0.68 -0.6 744,457 + -0.4 744,521 - -0.5 744,557 - -1.4 744,605 - -0.7 744,858 - Dshi_0738 0.88 -1.0 745,115 - Dshi_0739 0.13 -0.0 745,288 - Dshi_0739 0.25 -1.2 745,503 + Dshi_0739 0.39 +0.3
Or see this region's nucleotide sequence