Strain Fitness in Shewanella oneidensis MR-1 around SO3206

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,344,543	+		SO3204	0.50	-0.5
3,344,615	+		SO3204	0.59	-0.1
3,344,641	-		SO3204	0.62	+0.9
3,344,715	+		SO3204	0.71	-1.2
3,344,782	+		SO3204	0.80	-0.1
3,344,935	-				-1.1
3,344,936	-				+0.4
3,345,004	-				+0.2
3,345,010	-				+0.2
3,345,035	-				-0.2
3,345,038	+				-0.4
3,345,058	-		SO3205	0.10	-0.6
3,345,258	+		SO3205	0.47	+0.7
3,345,266	-		SO3205	0.49	-0.1
3,345,266	-		SO3205	0.49	+0.2
3,345,266	-		SO3205	0.49	+0.0
3,345,350	+		SO3205	0.64	+0.3
3,345,350	+		SO3205	0.64	+0.6
3,345,408	-		SO3205	0.75	+0.4
3,345,528	-				+0.7
3,345,764	-	cheB-3	SO3206	0.20	+0.8
3,345,800	-	cheB-3	SO3206	0.23	+0.4
3,345,840	-				-0.1
3,345,996	+	cheB-3	SO3206	0.41	-0.7
3,346,075	-	cheB-3	SO3206	0.48	+0.0
3,346,101	+	cheB-3	SO3206	0.50	+0.2
3,346,209	-	cheB-3	SO3206	0.60	-0.4
3,346,369	+	cheB-3	SO3206	0.74	+0.9
3,346,378	+	cheB-3	SO3206	0.75	+0.3
3,346,421	+	cheB-3	SO3206	0.79	+1.7
3,346,434	-	cheB-3	SO3206	0.80	+1.0
3,346,475	+	cheB-3	SO3206	0.83	-0.0
3,346,527	+	cheB-3	SO3206	0.88	+1.0
3,346,535	-	cheB-3	SO3206	0.89	+1.4
3,346,730	-				+0.3
3,346,858	-				+0.2
3,346,861	+				-0.6
3,346,873	-				+0.2
3,346,944	+		SO3207	0.12	+0.5
3,346,993	-		SO3207	0.14	+0.8
3,347,014	-		SO3207	0.15	-0.5
3,347,144	+		SO3207	0.20	-0.2
3,347,152	-		SO3207	0.21	-2.2
3,347,152	-		SO3207	0.21	+0.1
3,347,172	-		SO3207	0.22	-0.7
3,347,172	-		SO3207	0.22	-0.9
3,347,185	-		SO3207	0.22	-0.4
3,347,447	+		SO3207	0.34	+0.2
3,347,447	+		SO3207	0.34	+0.1
3,347,455	-		SO3207	0.34	-1.2
3,347,455	-		SO3207	0.34	+0.1
3,347,504	+		SO3207	0.36	-1.2
3,347,507	-		SO3207	0.36	-0.4