Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS20025

Experiment: Melibiose (C); 6 days

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS20020 and ABZR88_RS20025 are separated by 619 nucleotidesABZR88_RS20025 and ABZR88_RS20030 are separated by 9 nucleotidesABZR88_RS20030 and ABZR88_RS20035 are separated by 99 nucleotidesABZR88_RS20035 and ABZR88_RS20040 are separated by 3 nucleotides ABZR88_RS20020: ABZR88_RS20020 - energy transducer TonB, at 4,863,889 to 4,864,557 _RS20020 ABZR88_RS20025: ABZR88_RS20025 - peptidoglycan DD-metalloendopeptidase family protein, at 4,865,177 to 4,865,863 _RS20025 ABZR88_RS20030: ABZR88_RS20030 - ribosome-binding factor A, at 4,865,873 to 4,866,244 _RS20030 ABZR88_RS20035: ABZR88_RS20035 - hypothetical protein, at 4,866,344 to 4,866,760 _RS20035 ABZR88_RS20040: ABZR88_RS20040 - ABC transporter permease, at 4,866,764 to 4,867,990 _RS20040 Position (kb) 4865 4866Strain fitness (log2 ratio) -2 -1 0 1 2at 4864.191 kb on + strand, within ABZR88_RS20020at 4864.201 kb on + strand, within ABZR88_RS20020at 4864.272 kb on + strand, within ABZR88_RS20020at 4864.284 kb on + strand, within ABZR88_RS20020at 4864.397 kb on + strand, within ABZR88_RS20020at 4864.397 kb on + strand, within ABZR88_RS20020at 4864.494 kb on + strandat 4865.131 kb on + strandat 4865.135 kb on + strandat 4865.139 kb on - strandat 4865.247 kb on - strand, within ABZR88_RS20025at 4865.408 kb on + strand, within ABZR88_RS20025at 4865.468 kb on - strand, within ABZR88_RS20025at 4865.612 kb on - strand, within ABZR88_RS20025at 4865.630 kb on - strand, within ABZR88_RS20025at 4865.795 kb on - strandat 4865.795 kb on - strandat 4866.311 kb on + strandat 4866.437 kb on + strand, within ABZR88_RS20035at 4866.438 kb on - strand, within ABZR88_RS20035at 4866.448 kb on + strand, within ABZR88_RS20035at 4866.523 kb on - strand, within ABZR88_RS20035at 4866.574 kb on + strand, within ABZR88_RS20035at 4866.589 kb on - strand, within ABZR88_RS20035at 4866.603 kb on - strand, within ABZR88_RS20035at 4866.603 kb on - strand, within ABZR88_RS20035at 4866.752 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Melibiose (C); 6 days
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4,864,191 + ABZR88_RS20020 0.45 -0.2
4,864,201 + ABZR88_RS20020 0.47 +0.9
4,864,272 + ABZR88_RS20020 0.57 +0.3
4,864,284 + ABZR88_RS20020 0.59 +0.7
4,864,397 + ABZR88_RS20020 0.76 -1.2
4,864,397 + ABZR88_RS20020 0.76 +0.5
4,864,494 + -0.1
4,865,131 + -0.2
4,865,135 + +1.9
4,865,139 - +0.7
4,865,247 - ABZR88_RS20025 0.10 -0.1
4,865,408 + ABZR88_RS20025 0.34 -1.6
4,865,468 - ABZR88_RS20025 0.42 -0.8
4,865,612 - ABZR88_RS20025 0.63 -0.8
4,865,630 - ABZR88_RS20025 0.66 -0.8
4,865,795 - -1.2
4,865,795 - +1.5
4,866,311 + -0.9
4,866,437 + ABZR88_RS20035 0.22 -2.2
4,866,438 - ABZR88_RS20035 0.23 -2.6
4,866,448 + ABZR88_RS20035 0.25 -0.5
4,866,523 - ABZR88_RS20035 0.43 -0.2
4,866,574 + ABZR88_RS20035 0.55 +0.1
4,866,589 - ABZR88_RS20035 0.59 -0.0
4,866,603 - ABZR88_RS20035 0.62 +0.7
4,866,603 - ABZR88_RS20035 0.62 +0.1
4,866,752 - -1.2

Or see this region's nucleotide sequence