Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS09220

Experiment: Melibiose (C); 6 days

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS09210 and ABZR88_RS09215 are separated by 12 nucleotidesABZR88_RS09215 and ABZR88_RS09220 are separated by 2 nucleotidesABZR88_RS09220 and ABZR88_RS09225 are separated by 150 nucleotides ABZR88_RS09210: ABZR88_RS09210 - DEAD/DEAH box helicase, at 2,312,983 to 2,314,329 _RS09210 ABZR88_RS09215: ABZR88_RS09215 - hypothetical protein, at 2,314,342 to 2,314,617 _RS09215 ABZR88_RS09220: ABZR88_RS09220 - gliding motility protein GldC, at 2,314,620 to 2,314,949 _RS09220 ABZR88_RS09225: ABZR88_RS09225 - MFS transporter, at 2,315,100 to 2,316,305 _RS09225 Position (kb) 2314 2315Strain fitness (log2 ratio) -2 -1 0 1at 2314.402 kb on + strand, within ABZR88_RS09215at 2314.594 kb on - strandat 2314.596 kb on - strandat 2314.648 kb on + strandat 2314.649 kb on - strandat 2314.694 kb on + strand, within ABZR88_RS09220at 2314.856 kb on + strand, within ABZR88_RS09220at 2314.939 kb on + strandat 2315.022 kb on - strandat 2315.051 kb on - strandat 2315.184 kb on - strandat 2315.189 kb on - strandat 2315.338 kb on - strand, within ABZR88_RS09225at 2315.448 kb on - strand, within ABZR88_RS09225at 2315.448 kb on - strand, within ABZR88_RS09225at 2315.448 kb on - strand, within ABZR88_RS09225at 2315.450 kb on - strand, within ABZR88_RS09225at 2315.589 kb on + strand, within ABZR88_RS09225at 2315.646 kb on + strand, within ABZR88_RS09225at 2315.761 kb on - strand, within ABZR88_RS09225at 2315.916 kb on - strand, within ABZR88_RS09225

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Per-strain Table

Position Strand Gene LocusTag Fraction Melibiose (C); 6 days
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2,314,402 + ABZR88_RS09215 0.22 +0.1
2,314,594 - -0.6
2,314,596 - -0.6
2,314,648 + +0.5
2,314,649 - -2.4
2,314,694 + ABZR88_RS09220 0.22 -1.8
2,314,856 + ABZR88_RS09220 0.72 -1.3
2,314,939 + -0.0
2,315,022 - +0.2
2,315,051 - -0.3
2,315,184 - -0.4
2,315,189 - +0.5
2,315,338 - ABZR88_RS09225 0.20 -1.1
2,315,448 - ABZR88_RS09225 0.29 +0.0
2,315,448 - ABZR88_RS09225 0.29 -0.6
2,315,448 - ABZR88_RS09225 0.29 -0.4
2,315,450 - ABZR88_RS09225 0.29 -0.5
2,315,589 + ABZR88_RS09225 0.41 +0.2
2,315,646 + ABZR88_RS09225 0.45 -1.4
2,315,761 - ABZR88_RS09225 0.55 -0.6
2,315,916 - ABZR88_RS09225 0.68 -0.6

Or see this region's nucleotide sequence