Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02682

Experiment: 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02680 and MPMX20_02681 are separated by 28 nucleotidesMPMX20_02681 and MPMX20_02682 are separated by 23 nucleotides MPMX20_02680: MPMX20_02680 - hypothetical protein, at 2,829,922 to 2,831,265 _02680 MPMX20_02681: MPMX20_02681 - hypothetical protein, at 2,831,294 to 2,831,797 _02681 MPMX20_02682: MPMX20_02682 - hypothetical protein, at 2,831,821 to 2,832,315 _02682 Position (kb) 2831 2832 2833Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7at 2830.867 kb on + strand, within MPMX20_02680at 2831.064 kb on + strand, within MPMX20_02680at 2831.072 kb on - strand, within MPMX20_02680at 2831.072 kb on - strand, within MPMX20_02680at 2831.077 kb on + strand, within MPMX20_02680at 2831.082 kb on + strand, within MPMX20_02680at 2831.085 kb on - strand, within MPMX20_02680at 2831.085 kb on - strand, within MPMX20_02680at 2831.087 kb on + strand, within MPMX20_02680at 2831.093 kb on + strand, within MPMX20_02680at 2831.142 kb on + strandat 2831.142 kb on + strandat 2831.162 kb on - strandat 2831.177 kb on + strandat 2831.185 kb on - strandat 2831.316 kb on - strandat 2831.339 kb on + strandat 2831.339 kb on + strandat 2831.339 kb on + strandat 2831.400 kb on + strand, within MPMX20_02681at 2831.408 kb on - strand, within MPMX20_02681at 2831.478 kb on + strand, within MPMX20_02681at 2831.483 kb on + strand, within MPMX20_02681at 2831.483 kb on + strand, within MPMX20_02681at 2831.486 kb on - strand, within MPMX20_02681at 2831.491 kb on - strand, within MPMX20_02681at 2831.558 kb on + strand, within MPMX20_02681at 2831.594 kb on - strand, within MPMX20_02681at 2831.594 kb on - strand, within MPMX20_02681at 2831.676 kb on + strand, within MPMX20_02681at 2831.676 kb on + strand, within MPMX20_02681at 2831.684 kb on - strand, within MPMX20_02681at 2831.880 kb on + strand, within MPMX20_02682at 2831.880 kb on + strand, within MPMX20_02682at 2831.880 kb on + strand, within MPMX20_02682at 2831.888 kb on - strand, within MPMX20_02682at 2831.888 kb on - strand, within MPMX20_02682at 2831.888 kb on - strand, within MPMX20_02682at 2831.888 kb on - strand, within MPMX20_02682at 2831.939 kb on + strand, within MPMX20_02682at 2831.954 kb on + strand, within MPMX20_02682at 2831.962 kb on - strand, within MPMX20_02682at 2831.971 kb on + strand, within MPMX20_02682at 2831.971 kb on + strand, within MPMX20_02682at 2831.971 kb on + strand, within MPMX20_02682at 2831.971 kb on + strand, within MPMX20_02682at 2831.979 kb on - strand, within MPMX20_02682at 2831.981 kb on + strand, within MPMX20_02682at 2832.020 kb on + strand, within MPMX20_02682at 2832.026 kb on - strand, within MPMX20_02682at 2832.028 kb on - strand, within MPMX20_02682at 2832.043 kb on - strand, within MPMX20_02682at 2832.048 kb on - strand, within MPMX20_02682at 2832.072 kb on + strand, within MPMX20_02682at 2832.077 kb on + strand, within MPMX20_02682at 2832.077 kb on + strand, within MPMX20_02682at 2832.084 kb on + strand, within MPMX20_02682at 2832.084 kb on - strand, within MPMX20_02682at 2832.151 kb on - strand, within MPMX20_02682at 2832.153 kb on + strand, within MPMX20_02682at 2832.153 kb on + strand, within MPMX20_02682at 2832.153 kb on + strand, within MPMX20_02682at 2832.161 kb on - strand, within MPMX20_02682at 2832.168 kb on - strand, within MPMX20_02682at 2832.187 kb on - strand, within MPMX20_02682at 2832.189 kb on + strand, within MPMX20_02682at 2832.203 kb on + strand, within MPMX20_02682at 2832.208 kb on + strand, within MPMX20_02682at 2832.216 kb on - strand, within MPMX20_02682at 2832.217 kb on + strand, within MPMX20_02682at 2832.233 kb on + strand, within MPMX20_02682at 2832.233 kb on + strand, within MPMX20_02682at 2832.238 kb on + strand, within MPMX20_02682at 2832.245 kb on + strand, within MPMX20_02682at 2832.246 kb on - strand, within MPMX20_02682at 2832.257 kb on + strand, within MPMX20_02682at 2832.263 kb on - strand, within MPMX20_02682at 2832.263 kb on - strand, within MPMX20_02682at 2832.290 kb on + strandat 2832.290 kb on + strandat 2832.290 kb on + strandat 2832.290 kb on + strandat 2832.306 kb on - strandat 2832.348 kb on + strandat 2832.348 kb on + strandat 2832.355 kb on + strandat 2832.371 kb on - strandat 2832.379 kb on - strandat 2832.382 kb on - strandat 2832.431 kb on - strandat 2832.431 kb on - strandat 2832.444 kb on + strandat 2832.444 kb on + strandat 2832.444 kb on + strandat 2832.449 kb on + strandat 2832.452 kb on - strandat 2832.452 kb on - strandat 2832.463 kb on - strandat 2832.463 kb on - strandat 2832.497 kb on + strandat 2832.500 kb on + strandat 2832.505 kb on - strandat 2832.541 kb on - strandat 2832.541 kb on - strandat 2832.541 kb on - strandat 2832.541 kb on - strandat 2832.558 kb on + strandat 2832.566 kb on - strandat 2832.566 kb on - strandat 2832.691 kb on + strandat 2832.691 kb on + strandat 2832.691 kb on + strandat 2832.699 kb on - strandat 2832.699 kb on - strandat 2832.713 kb on + strandat 2832.713 kb on - strandat 2832.727 kb on + strandat 2832.732 kb on + strandat 2832.767 kb on + strandat 2832.805 kb on + strandat 2832.813 kb on - strandat 2832.938 kb on - strandat 2832.940 kb on + strandat 2832.940 kb on + strandat 2832.940 kb on + strandat 2832.948 kb on - strandat 2832.948 kb on - strandat 2832.989 kb on - strandat 2832.989 kb on - strandat 2832.989 kb on - strandat 2832.989 kb on - strandat 2832.989 kb on - strandat 2832.993 kb on + strandat 2832.993 kb on + strandat 2832.993 kb on - strandat 2832.993 kb on - strandat 2832.993 kb on - strandat 2832.999 kb on - strandat 2833.000 kb on + strandat 2833.001 kb on - strandat 2833.001 kb on - strandat 2833.001 kb on - strandat 2833.001 kb on - strandat 2833.001 kb on - strandat 2833.001 kb on - strandat 2833.001 kb on - strandat 2833.001 kb on - strandat 2833.001 kb on - strandat 2833.001 kb on - strandat 2833.001 kb on - strandat 2833.001 kb on - strandat 2833.005 kb on + strandat 2833.005 kb on + strandat 2833.005 kb on + strandat 2833.005 kb on + strandat 2833.008 kb on - strandat 2833.012 kb on - strandat 2833.013 kb on - strandat 2833.013 kb on - strandat 2833.013 kb on - strandat 2833.013 kb on - strandat 2833.018 kb on - strandat 2833.018 kb on - strandat 2833.018 kb on - strandat 2833.023 kb on - strandat 2833.025 kb on - strandat 2833.025 kb on - strandat 2833.025 kb on - strandat 2833.028 kb on - strandat 2833.051 kb on + strandat 2833.051 kb on + strandat 2833.051 kb on - strandat 2833.059 kb on - strandat 2833.059 kb on - strandat 2833.059 kb on - strandat 2833.059 kb on - strandat 2833.059 kb on - strandat 2833.066 kb on + strandat 2833.073 kb on + strandat 2833.073 kb on + strandat 2833.073 kb on + strandat 2833.073 kb on + strandat 2833.077 kb on + strandat 2833.081 kb on - strandat 2833.081 kb on - strandat 2833.081 kb on - strandat 2833.081 kb on - strandat 2833.081 kb on - strandat 2833.081 kb on - strandat 2833.085 kb on + strandat 2833.085 kb on + strandat 2833.085 kb on + strandat 2833.085 kb on - strandat 2833.093 kb on - strandat 2833.093 kb on - strandat 2833.093 kb on - strandat 2833.297 kb on - strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.304 kb on + strandat 2833.312 kb on - strandat 2833.312 kb on - strandat 2833.312 kb on - strandat 2833.312 kb on - strandat 2833.312 kb on - strandat 2833.312 kb on - strandat 2833.312 kb on - strandat 2833.312 kb on - strandat 2833.312 kb on - strandat 2833.312 kb on - strandat 2833.312 kb on - strandat 2833.312 kb on - strandat 2833.312 kb on - strandat 2833.312 kb on - strandat 2833.312 kb on - strandat 2833.312 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196
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2,830,867 + MPMX20_02680 0.70 -1.9
2,831,064 + MPMX20_02680 0.85 -0.2
2,831,072 - MPMX20_02680 0.86 -1.3
2,831,072 - MPMX20_02680 0.86 -0.4
2,831,077 + MPMX20_02680 0.86 -2.3
2,831,082 + MPMX20_02680 0.86 +0.2
2,831,085 - MPMX20_02680 0.87 +1.6
2,831,085 - MPMX20_02680 0.87 -0.5
2,831,087 + MPMX20_02680 0.87 +0.8
2,831,093 + MPMX20_02680 0.87 -2.2
2,831,142 + -1.8
2,831,142 + -1.3
2,831,162 - -2.4
2,831,177 + +0.2
2,831,185 - -2.4
2,831,316 - +2.4
2,831,339 + -1.0
2,831,339 + +2.3
2,831,339 + +0.8
2,831,400 + MPMX20_02681 0.21 -1.2
2,831,408 - MPMX20_02681 0.23 -2.6
2,831,478 + MPMX20_02681 0.37 -1.4
2,831,483 + MPMX20_02681 0.38 -0.6
2,831,483 + MPMX20_02681 0.38 -1.4
2,831,486 - MPMX20_02681 0.38 +1.7
2,831,491 - MPMX20_02681 0.39 +0.9
2,831,558 + MPMX20_02681 0.52 -1.6
2,831,594 - MPMX20_02681 0.60 -1.3
2,831,594 - MPMX20_02681 0.60 -0.1
2,831,676 + MPMX20_02681 0.76 +1.2
2,831,676 + MPMX20_02681 0.76 +1.8
2,831,684 - MPMX20_02681 0.77 -0.7
2,831,880 + MPMX20_02682 0.12 -0.7
2,831,880 + MPMX20_02682 0.12 +4.1
2,831,880 + MPMX20_02682 0.12 -0.4
2,831,888 - MPMX20_02682 0.14 +4.6
2,831,888 - MPMX20_02682 0.14 +1.4
2,831,888 - MPMX20_02682 0.14 +6.9
2,831,888 - MPMX20_02682 0.14 -2.4
2,831,939 + MPMX20_02682 0.24 -0.0
2,831,954 + MPMX20_02682 0.27 +4.0
2,831,962 - MPMX20_02682 0.28 +2.6
2,831,971 + MPMX20_02682 0.30 +3.4
2,831,971 + MPMX20_02682 0.30 +5.1
2,831,971 + MPMX20_02682 0.30 +2.8
2,831,971 + MPMX20_02682 0.30 +0.3
2,831,979 - MPMX20_02682 0.32 +3.8
2,831,981 + MPMX20_02682 0.32 +1.8
2,832,020 + MPMX20_02682 0.40 +2.5
2,832,026 - MPMX20_02682 0.41 +2.4
2,832,028 - MPMX20_02682 0.42 +3.9
2,832,043 - MPMX20_02682 0.45 +3.2
2,832,048 - MPMX20_02682 0.46 -0.3
2,832,072 + MPMX20_02682 0.51 +2.0
2,832,077 + MPMX20_02682 0.52 -0.5
2,832,077 + MPMX20_02682 0.52 +2.0
2,832,084 + MPMX20_02682 0.53 +2.1
2,832,084 - MPMX20_02682 0.53 -2.1
2,832,151 - MPMX20_02682 0.67 +2.3
2,832,153 + MPMX20_02682 0.67 +1.8
2,832,153 + MPMX20_02682 0.67 +2.5
2,832,153 + MPMX20_02682 0.67 +5.3
2,832,161 - MPMX20_02682 0.69 +1.9
2,832,168 - MPMX20_02682 0.70 -0.9
2,832,187 - MPMX20_02682 0.74 -1.9
2,832,189 + MPMX20_02682 0.74 +2.0
2,832,203 + MPMX20_02682 0.77 -0.7
2,832,208 + MPMX20_02682 0.78 +4.8
2,832,216 - MPMX20_02682 0.80 +1.8
2,832,217 + MPMX20_02682 0.80 -0.3
2,832,233 + MPMX20_02682 0.83 -2.3
2,832,233 + MPMX20_02682 0.83 +0.8
2,832,238 + MPMX20_02682 0.84 -0.0
2,832,245 + MPMX20_02682 0.86 +1.7
2,832,246 - MPMX20_02682 0.86 +1.3
2,832,257 + MPMX20_02682 0.88 -1.2
2,832,263 - MPMX20_02682 0.89 -0.9
2,832,263 - MPMX20_02682 0.89 +4.2
2,832,290 + +4.4
2,832,290 + +6.2
2,832,290 + +2.8
2,832,290 + -0.4
2,832,306 - +2.6
2,832,348 + -1.6
2,832,348 + +1.1
2,832,355 + -0.1
2,832,371 - -2.2
2,832,379 - -1.2
2,832,382 - -1.7
2,832,431 - +0.6
2,832,431 - +0.5
2,832,444 + -2.0
2,832,444 + +2.1
2,832,444 + -2.4
2,832,449 + +1.3
2,832,452 - +0.1
2,832,452 - +2.3
2,832,463 - -1.1
2,832,463 - +3.2
2,832,497 + +2.7
2,832,500 + +1.6
2,832,505 - -0.2
2,832,541 - -1.2
2,832,541 - +1.3
2,832,541 - -2.3
2,832,541 - +0.8
2,832,558 + +1.6
2,832,566 - -2.1
2,832,566 - -0.4
2,832,691 + -0.7
2,832,691 + -2.6
2,832,691 + -0.2
2,832,699 - -2.5
2,832,699 - +1.1
2,832,713 + +1.6
2,832,713 - +0.1
2,832,727 + -0.6
2,832,732 + +0.4
2,832,767 + -0.9
2,832,805 + -0.5
2,832,813 - -0.2
2,832,938 - +0.1
2,832,940 + +2.6
2,832,940 + +1.6
2,832,940 + +1.0
2,832,948 - +1.0
2,832,948 - -1.7
2,832,989 - +0.7
2,832,989 - -1.8
2,832,989 - +1.6
2,832,989 - -3.1
2,832,989 - -0.0
2,832,993 + +0.6
2,832,993 + +1.6
2,832,993 - -1.5
2,832,993 - -0.7
2,832,993 - -2.2
2,832,999 - +1.6
2,833,000 + +0.5
2,833,001 - -1.0
2,833,001 - +0.5
2,833,001 - -0.5
2,833,001 - +2.3
2,833,001 - -1.8
2,833,001 - +1.5
2,833,001 - +0.3
2,833,001 - +1.0
2,833,001 - -1.0
2,833,001 - +0.2
2,833,001 - +3.6
2,833,001 - -0.9
2,833,005 + -0.4
2,833,005 + -0.3
2,833,005 + +1.1
2,833,005 + -1.3
2,833,008 - +1.6
2,833,012 - +0.8
2,833,013 - -1.9
2,833,013 - -3.0
2,833,013 - -0.7
2,833,013 - +0.7
2,833,018 - -1.5
2,833,018 - -0.4
2,833,018 - -0.0
2,833,023 - +0.9
2,833,025 - -0.1
2,833,025 - -1.7
2,833,025 - -0.5
2,833,028 - +1.0
2,833,051 + -0.6
2,833,051 + +1.3
2,833,051 - -0.3
2,833,059 - +1.0
2,833,059 - -0.3
2,833,059 - +2.6
2,833,059 - -0.2
2,833,059 - -0.7
2,833,066 + -0.7
2,833,073 + +2.6
2,833,073 + +1.4
2,833,073 + +1.6
2,833,073 + +0.2
2,833,077 + +1.2
2,833,081 - -0.0
2,833,081 - +0.1
2,833,081 - +1.3
2,833,081 - -3.0
2,833,081 - +0.1
2,833,081 - +0.4
2,833,085 + +0.6
2,833,085 + -0.9
2,833,085 + +0.1
2,833,085 - +3.2
2,833,093 - +1.3
2,833,093 - +1.3
2,833,093 - +0.1
2,833,297 - -1.1
2,833,304 + +2.6
2,833,304 + -1.4
2,833,304 + +0.8
2,833,304 + -0.7
2,833,304 + -1.7
2,833,304 + -0.1
2,833,304 + +0.5
2,833,304 + -0.2
2,833,304 + -0.4
2,833,304 + +1.8
2,833,304 + -2.1
2,833,304 + -0.7
2,833,304 + +0.9
2,833,304 + +0.2
2,833,304 + -1.6
2,833,304 + +3.8
2,833,304 + -1.8
2,833,304 + -1.9
2,833,304 + +4.2
2,833,304 + -0.2
2,833,304 + -1.4
2,833,312 - -0.6
2,833,312 - -0.5
2,833,312 - -0.9
2,833,312 - -1.5
2,833,312 - +1.7
2,833,312 - +0.6
2,833,312 - +0.2
2,833,312 - +0.6
2,833,312 - -0.8
2,833,312 - +1.6
2,833,312 - +1.1
2,833,312 - -1.3
2,833,312 - -0.7
2,833,312 - -0.3
2,833,312 - +0.1
2,833,312 - -0.2

Or see this region's nucleotide sequence